RNA–Protein interactions for RNA: ENST00000477360.2

CLCNKA-205, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 400 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-205ENST00000477360 LPPQ93052 612 aa13.57□□□□□ -0.24
CLCNKA-205ENST00000477360 TSPAN18Q96SJ8 248 aa13.57□□□□□ -0.24
CLCNKA-205ENST00000477360 CDCA3Q99618 268 aaPredicted RBP13.57□□□□□ -0.24
CLCNKA-205ENST00000477360 NXF3Q9H4D5 531 aaKnown RBP13.57□□□□□ -0.24
CLCNKA-205ENST00000477360 TOPORSQ9NS56 1045 aaPredicted RBP13.57□□□□□ -0.24
CLCNKA-205ENST00000477360 PCDHA7Q9UN72 937 aa13.57□□□□□ -0.24
CLCNKA-205ENST00000477360 IRAK3Q9Y616 596 aa13.57□□□□□ -0.24
CLCNKA-205ENST00000477360 FAM237AA0A1B0GTK4 181 aa13.56□□□□□ -0.24
CLCNKA-205ENST00000477360 SLC16A4O15374 487 aa13.56□□□□□ -0.24
CLCNKA-205ENST00000477360 NPTXRO95502 500 aa13.56□□□□□ -0.24
CLCNKA-205ENST00000477360 MYL1P05976 194 aa13.56□□□□□ -0.24
CLCNKA-205ENST00000477360 GALTP07902 379 aa13.56□□□□□ -0.24
CLCNKA-205ENST00000477360 CMA1P23946 247 aa13.56□□□□□ -0.24
CLCNKA-205ENST00000477360 GRM5P41594 1212 aa13.56□□□□□ -0.24
CLCNKA-205ENST00000477360 MCL1Q07820 350 aa13.56□□□□□ -0.24
CLCNKA-205ENST00000477360 CAMK1Q14012 370 aa13.56□□□□□ -0.24
CLCNKA-205ENST00000477360 TMEM132AQ24JP5 1023 aa13.56□□□□□ -0.24
CLCNKA-205ENST00000477360 XKR4Q5GH76 650 aa13.56□□□□□ -0.24
CLCNKA-205ENST00000477360 FOXD4L5Q5VV16 416 aaPredicted RBP13.56□□□□□ -0.24
CLCNKA-205ENST00000477360 MPZL3Q6UWV2 235 aa13.56□□□□□ -0.24
CLCNKA-205ENST00000477360 DDX53Q86TM3 631 aaKnown RBP13.56□□□□□ -0.24
CLCNKA-205ENST00000477360 GSTCDQ8NEC7 633 aa13.56□□□□□ -0.24
CLCNKA-205ENST00000477360 LEO1Q8WVC0 666 aaPredicted RBP13.56□□□□□ -0.24
CLCNKA-205ENST00000477360 POF1BQ8WVV4 589 aa13.56□□□□□ -0.24
CLCNKA-205ENST00000477360 FOXD4L4Q8WXT5 416 aaPredicted RBP13.56□□□□□ -0.24
CLCNKA-205ENST00000477360 DNAJC19Q96DA6 116 aa13.56□□□□□ -0.24
CLCNKA-205ENST00000477360 TMEM169Q96HH4 297 aa13.56□□□□□ -0.24
CLCNKA-205ENST00000477360 FAM193BQ96PV7 902 aaPredicted RBP13.56□□□□□ -0.24
CLCNKA-205ENST00000477360 FIZ1Q96SL8 496 aa13.56□□□□□ -0.24
CLCNKA-205ENST00000477360 KIFC3Q9BVG8 833 aa13.56□□□□□ -0.24
CLCNKA-205ENST00000477360 NRDE2Q9H7Z3 1164 aa13.56□□□□□ -0.24
CLCNKA-205ENST00000477360 TLR9Q9NR96 1032 aa13.56□□□□□ -0.24
CLCNKA-205ENST00000477360 THEGQ9P2T0 379 aa13.56□□□□□ -0.24
CLCNKA-205ENST00000477360 TBX20Q9UMR3 447 aa13.56□□□□□ -0.24
CLCNKA-205ENST00000477360 COL4A4P53420 1690 aaPredicted RBP13.56□□□□□ -0.24
CLCNKA-205ENST00000477360 COL6A3P12111 3177 aa13.55□□□□□ -0.24
CLCNKA-205ENST00000477360 NLRC5Q86WI3 1866 aa13.55□□□□□ -0.24
CLCNKA-205ENST00000477360 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.55□□□□□ -0.24
CLCNKA-205ENST00000477360 A0A1W2PQ27 194 aa13.55□□□□□ -0.24
CLCNKA-205ENST00000477360 A0A1W2PQ64 194 aa13.55□□□□□ -0.24
CLCNKA-205ENST00000477360 A0A1W2PQD8 194 aa13.55□□□□□ -0.24
CLCNKA-205ENST00000477360 MYMKA6NI61 221 aa13.55□□□□□ -0.24
CLCNKA-205ENST00000477360 TTLL13PA6NNM8 815 aa13.55□□□□□ -0.24
CLCNKA-205ENST00000477360 MEIS3P2A8K0S8 358 aa13.55□□□□□ -0.24
CLCNKA-205ENST00000477360 SFI1A8K8P3 1242 aa13.55□□□□□ -0.24
CLCNKA-205ENST00000477360 ABLIM1O14639 778 aa13.55□□□□□ -0.24
CLCNKA-205ENST00000477360 FSCN2O14926 492 aa13.55□□□□□ -0.24
CLCNKA-205ENST00000477360 C1RP00736 705 aa13.55□□□□□ -0.24
CLCNKA-205ENST00000477360 PUS10Q3MIT2 529 aaKnown RBP13.55□□□□□ -0.24
CLCNKA-205ENST00000477360 ZNF720Q7Z2F6 126 aa13.55□□□□□ -0.24
CLCNKA-205ENST00000477360 MAP4K3Q8IVH8 894 aa13.55□□□□□ -0.24
CLCNKA-205ENST00000477360 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.55□□□□□ -0.24
CLCNKA-205ENST00000477360 COLGALT2Q8IYK4 626 aa13.55□□□□□ -0.24
CLCNKA-205ENST00000477360 HLA-CQ95604 372 aa13.55□□□□□ -0.24
CLCNKA-205ENST00000477360 PABPC5Q96DU9 382 aaKnown RBP13.55□□□□□ -0.24
CLCNKA-205ENST00000477360 IGSF21Q96ID5 467 aa13.55□□□□□ -0.24
CLCNKA-205ENST00000477360 SPATA32Q96LK8 384 aa13.55□□□□□ -0.24
CLCNKA-205ENST00000477360 GAD1Q99259 594 aa13.55□□□□□ -0.24
CLCNKA-205ENST00000477360 CCDC94Q9BW85 323 aaPredicted RBP13.55□□□□□ -0.24
CLCNKA-205ENST00000477360 STRA6Q9BX79 667 aa13.55□□□□□ -0.24
CLCNKA-205ENST00000477360 RNF39Q9H2S5 420 aa13.55□□□□□ -0.24
CLCNKA-205ENST00000477360 PLEKHA5Q9HAU0 1116 aa13.55□□□□□ -0.24
CLCNKA-205ENST00000477360 A0A087X0B3 334 aa13.54□□□□□ -0.24
CLCNKA-205ENST00000477360 NPHP3-ACAD11A0A0J9YXS1 232 aa13.54□□□□□ -0.24
CLCNKA-205ENST00000477360 CLDN3O15551 220 aa13.54□□□□□ -0.24
CLCNKA-205ENST00000477360 ZC3H11AO75152 810 aaKnown RBP eCLIP13.54□□□□□ -0.24
CLCNKA-205ENST00000477360 PPP1R37O75864 691 aa13.54□□□□□ -0.24
CLCNKA-205ENST00000477360 RECQL4O94761 1208 aa13.54□□□□□ -0.24
CLCNKA-205ENST00000477360 EFEMP2O95967 443 aa13.54□□□□□ -0.24
CLCNKA-205ENST00000477360 EDN1P05305 212 aa13.54□□□□□ -0.24
CLCNKA-205ENST00000477360 IBSPP21815 317 aaPredicted RBP13.54□□□□□ -0.24
CLCNKA-205ENST00000477360 MLH1P40692 756 aa13.54□□□□□ -0.24
CLCNKA-205ENST00000477360 YARSP54577 528 aaKnown RBP13.54□□□□□ -0.24
CLCNKA-205ENST00000477360 RAD51AP2Q09MP3 1159 aa13.54□□□□□ -0.24
CLCNKA-205ENST00000477360 NOLC1Q14978 699 aaKnown RBP eCLIP13.54□□□□□ -0.24
CLCNKA-205ENST00000477360 CTC1Q2NKJ3 1217 aa13.54□□□□□ -0.24
CLCNKA-205ENST00000477360 ZNF568Q3ZCX4 644 aa13.54□□□□□ -0.24
CLCNKA-205ENST00000477360 EEF1DP3Q658K8 133 aa13.54□□□□□ -0.24
CLCNKA-205ENST00000477360 SLFN12LQ6IEE8 588 aa13.54□□□□□ -0.24
CLCNKA-205ENST00000477360 ALKAL1Q6UXT8 129 aa13.54□□□□□ -0.24
CLCNKA-205ENST00000477360 STXBP4Q6ZWJ1 553 aa13.54□□□□□ -0.24
CLCNKA-205ENST00000477360 CCDC65Q8IXS2 484 aa13.54□□□□□ -0.24
CLCNKA-205ENST00000477360 UROC1Q96N76 676 aa13.54□□□□□ -0.24
CLCNKA-205ENST00000477360 RPS6KC1Q96S38 1066 aa13.54□□□□□ -0.24
CLCNKA-205ENST00000477360 C7orf25Q9BPX7 421 aa13.54□□□□□ -0.24
CLCNKA-205ENST00000477360 TARS2Q9BW92 718 aaKnown RBP13.54□□□□□ -0.24
CLCNKA-205ENST00000477360 CDT1Q9H211 546 aa13.54□□□□□ -0.24
CLCNKA-205ENST00000477360 POLD4Q9HCU8 107 aa13.54□□□□□ -0.24
CLCNKA-205ENST00000477360 ALG13Q9NP73 1137 aaKnown RBP13.54□□□□□ -0.24
CLCNKA-205ENST00000477360 SLC38A7Q9NVC3 462 aa13.54□□□□□ -0.24
CLCNKA-205ENST00000477360 KCNH3Q9ULD8 1083 aa13.54□□□□□ -0.24
CLCNKA-205ENST00000477360 SSX2IPQ9Y2D8 614 aa13.54□□□□□ -0.24
CLCNKA-205ENST00000477360 INPP5FQ9Y2H2 1132 aa13.54□□□□□ -0.24
CLCNKA-205ENST00000477360 FAN1Q9Y2M0 1017 aa13.54□□□□□ -0.24
CLCNKA-205ENST00000477360 HES2Q9Y543 173 aa13.54□□□□□ -0.24
CLCNKA-205ENST00000477360 PCDHB13Q9Y5F0 798 aa13.54□□□□□ -0.24
CLCNKA-205ENST00000477360 STYXL1Q9Y6J8 313 aa13.54□□□□□ -0.24
CLCNKA-205ENST00000477360 K7ENM7 598 aa13.53□□□□□ -0.24
CLCNKA-205ENST00000477360 HNRNPDLO14979 420 aaKnown RBP13.53□□□□□ -0.24
CLCNKA-205ENST00000477360 THP07101 528 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms