RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 KCNB1Q14721 858 aa17.39■□□□□ 0.37
COPS3-207ENST00000477299 ZNF568Q3ZCX4 644 aa17.39■□□□□ 0.37
COPS3-207ENST00000477299 PAN2Q504Q3 1202 aaKnown RBP17.39■□□□□ 0.37
COPS3-207ENST00000477299 NPAS4Q8IUM7 802 aa17.39■□□□□ 0.37
COPS3-207ENST00000477299 THNSL1Q8IYQ7 743 aa17.39■□□□□ 0.37
COPS3-207ENST00000477299 HELQQ8TDG4 1101 aa17.39■□□□□ 0.37
COPS3-207ENST00000477299 MTIF3Q9H2K0 278 aaKnown RBP17.39■□□□□ 0.37
COPS3-207ENST00000477299 TMEM161AQ9NX61 479 aa17.39■□□□□ 0.37
COPS3-207ENST00000477299 KLK14Q9P0G3 267 aa17.39■□□□□ 0.37
COPS3-207ENST00000477299 LRFN2Q9ULH4 789 aa17.39■□□□□ 0.37
COPS3-207ENST00000477299 MYO9BQ13459 2157 aa17.39■□□□□ 0.37
COPS3-207ENST00000477299 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.38■□□□□ 0.37
COPS3-207ENST00000477299 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.38■□□□□ 0.37
COPS3-207ENST00000477299 CLIC2O15247 247 aa17.38■□□□□ 0.37
COPS3-207ENST00000477299 TOM1L1O75674 476 aa17.38■□□□□ 0.37
COPS3-207ENST00000477299 DGKIO75912 1065 aa17.38■□□□□ 0.37
COPS3-207ENST00000477299 SMC2O95347 1197 aa17.38■□□□□ 0.37
COPS3-207ENST00000477299 TNFSF9P41273 254 aa17.38■□□□□ 0.37
COPS3-207ENST00000477299 HTRA4P83105 476 aaPredicted RBP17.38■□□□□ 0.37
COPS3-207ENST00000477299 PSMD2Q13200 908 aa17.38■□□□□ 0.37
COPS3-207ENST00000477299 MPZL3Q6UWV2 235 aa17.38■□□□□ 0.37
COPS3-207ENST00000477299 ZPBP2Q6X784 338 aa17.38■□□□□ 0.37
COPS3-207ENST00000477299 SYCP3Q8IZU3 236 aa17.38■□□□□ 0.37
COPS3-207ENST00000477299 TMEM130Q8N3G9 435 aa17.38■□□□□ 0.37
COPS3-207ENST00000477299 SLC17A8Q8NDX2 589 aa17.38■□□□□ 0.37
COPS3-207ENST00000477299 PHOSPHO2Q8TCD6 241 aa17.38■□□□□ 0.37
COPS3-207ENST00000477299 HVCN1Q96D96 273 aa17.38■□□□□ 0.37
COPS3-207ENST00000477299 CCDC51Q96ER9 411 aa17.38■□□□□ 0.37
COPS3-207ENST00000477299 CBWD1Q9BRT8 395 aa17.38■□□□□ 0.37
COPS3-207ENST00000477299 ZBED2Q9BTP6 218 aa17.38■□□□□ 0.37
COPS3-207ENST00000477299 PBX4Q9BYU1 374 aa17.38■□□□□ 0.37
COPS3-207ENST00000477299 NUP62CLQ9H1M0 184 aa17.38■□□□□ 0.37
COPS3-207ENST00000477299 PCIF1Q9H4Z3 704 aa17.38■□□□□ 0.37
COPS3-207ENST00000477299 RC3H2Q9HBD1 1191 aaKnown RBP17.38■□□□□ 0.37
COPS3-207ENST00000477299 TMEM63CQ9P1W3 806 aa17.38■□□□□ 0.37
COPS3-207ENST00000477299 KIAA1468Q9P260 1216 aa17.38■□□□□ 0.37
COPS3-207ENST00000477299 EIF3DO15371 548 aaKnown RBP eCLIP17.37■□□□□ 0.37
COPS3-207ENST00000477299 FAM189A1O60320 539 aa17.37■□□□□ 0.37
COPS3-207ENST00000477299 OFD1O75665 1012 aa17.37■□□□□ 0.37
COPS3-207ENST00000477299 ITGA4P13612 1032 aa17.37■□□□□ 0.37
COPS3-207ENST00000477299 PRCPP42785 496 aa17.37■□□□□ 0.37
COPS3-207ENST00000477299 MATR3P43243 847 aaKnown RBP eCLIP17.37■□□□□ 0.37
COPS3-207ENST00000477299 MORC3Q14149 939 aa17.37■□□□□ 0.37
COPS3-207ENST00000477299 BMT2Q1RMZ1 405 aa17.37■□□□□ 0.37
COPS3-207ENST00000477299 LRRC55Q6ZSA7 311 aa17.37■□□□□ 0.37
COPS3-207ENST00000477299 ZNF689Q96CS4 500 aaPredicted RBP17.37■□□□□ 0.37
COPS3-207ENST00000477299 CCDC34Q96HJ3 373 aa17.37■□□□□ 0.37
COPS3-207ENST00000477299 LRCH3Q96II8 777 aa17.37■□□□□ 0.37
COPS3-207ENST00000477299 ZFP42Q96MM3 310 aa17.37■□□□□ 0.37
COPS3-207ENST00000477299 CASD1Q96PB1 797 aa17.37■□□□□ 0.37
COPS3-207ENST00000477299 GSDMAQ96QA5 445 aa17.37■□□□□ 0.37
COPS3-207ENST00000477299 TRIM6Q9C030 488 aaPredicted RBP17.37■□□□□ 0.37
COPS3-207ENST00000477299 NKX2-4Q9H2Z4 354 aa17.37■□□□□ 0.37
COPS3-207ENST00000477299 ELAC1Q9H777 363 aaKnown RBP17.37■□□□□ 0.37
COPS3-207ENST00000477299 PARP2Q9UGN5 583 aa17.37■□□□□ 0.37
COPS3-207ENST00000477299 STYXL1Q9Y6J8 313 aa17.37■□□□□ 0.37
COPS3-207ENST00000477299 LAMA3Q16787 3333 aa17.37■□□□□ 0.37
COPS3-207ENST00000477299 A0A0B4J269 797 aa17.36■□□□□ 0.37
COPS3-207ENST00000477299 GOLGA8IPA6NC78 632 aa17.36■□□□□ 0.37
COPS3-207ENST00000477299 GOLGA8JA6NMD2 632 aa17.36■□□□□ 0.37
COPS3-207ENST00000477299 TBKBP1A7MCY6 615 aa17.36■□□□□ 0.37
COPS3-207ENST00000477299 CLDN3O15551 220 aa17.36■□□□□ 0.37
COPS3-207ENST00000477299 TLL1O43897 1013 aa17.36■□□□□ 0.37
COPS3-207ENST00000477299 B4GALT3O60512 393 aa17.36■□□□□ 0.37
COPS3-207ENST00000477299 EOMESO95936 686 aa17.36■□□□□ 0.37
COPS3-207ENST00000477299 STAG3L1P0CL83 205 aa17.36■□□□□ 0.37
COPS3-207ENST00000477299 RAB27AP51159 221 aa17.36■□□□□ 0.37
COPS3-207ENST00000477299 MCL1Q07820 350 aa17.36■□□□□ 0.37
COPS3-207ENST00000477299 ALCAMQ13740 583 aa17.36■□□□□ 0.37
COPS3-207ENST00000477299 NOLC1Q14978 699 aaKnown RBP eCLIP17.36■□□□□ 0.37
COPS3-207ENST00000477299 ZNF658Q5TYW1 1059 aaPredicted RBP17.36■□□□□ 0.37
COPS3-207ENST00000477299 GSTCDQ8NEC7 633 aa17.36■□□□□ 0.37
COPS3-207ENST00000477299 SAAL1Q96ER3 474 aa17.36■□□□□ 0.37
COPS3-207ENST00000477299 GAD1Q99259 594 aa17.36■□□□□ 0.37
COPS3-207ENST00000477299 ADPGKQ9BRR6 497 aa17.36■□□□□ 0.37
COPS3-207ENST00000477299 MSTO1Q9BUK6 570 aa17.36■□□□□ 0.37
COPS3-207ENST00000477299 KCTD10Q9H3F6 313 aa17.36■□□□□ 0.37
COPS3-207ENST00000477299 HOOK1Q9UJC3 728 aaKnown RBP17.36■□□□□ 0.37
COPS3-207ENST00000477299 INPP5FQ9Y2H2 1132 aa17.36■□□□□ 0.37
COPS3-207ENST00000477299 A0A1W2PPC1 479 aa17.35■□□□□ 0.37
COPS3-207ENST00000477299 PPP1R3GB7ZBB8 358 aa17.35■□□□□ 0.37
COPS3-207ENST00000477299 RECQL4O94761 1208 aa17.35■□□□□ 0.37
COPS3-207ENST00000477299 MBD3O95983 291 aa17.35■□□□□ 0.37
COPS3-207ENST00000477299 CA3P07451 260 aa17.35■□□□□ 0.37
COPS3-207ENST00000477299 MCF2P10911 925 aa17.35■□□□□ 0.37
COPS3-207ENST00000477299 ACOT2P49753 483 aa17.35■□□□□ 0.37
COPS3-207ENST00000477299 WNT7BP56706 349 aa17.35■□□□□ 0.37
COPS3-207ENST00000477299 KNOP1Q1ED39 458 aaKnown RBP17.35■□□□□ 0.37
COPS3-207ENST00000477299 LRIT3Q3SXY7 679 aa17.35■□□□□ 0.37
COPS3-207ENST00000477299 CRELD2Q6UXH1 353 aaPredicted RBP17.35■□□□□ 0.37
COPS3-207ENST00000477299 POMGNT1Q8WZA1 660 aa17.35■□□□□ 0.37
COPS3-207ENST00000477299 CCDC47Q96A33 483 aaKnown RBP17.35■□□□□ 0.37
COPS3-207ENST00000477299 YME1L1Q96TA2 773 aa17.35■□□□□ 0.37
COPS3-207ENST00000477299 RAD9AQ99638 391 aa17.35■□□□□ 0.37
COPS3-207ENST00000477299 SEMA6BQ9H3T3 888 aa17.35■□□□□ 0.37
COPS3-207ENST00000477299 RSAD1Q9HA92 442 aa17.35■□□□□ 0.37
COPS3-207ENST00000477299 PLAGL2Q9UPG8 496 aa17.35■□□□□ 0.37
COPS3-207ENST00000477299 EXOC7Q9UPT5 735 aa17.35■□□□□ 0.37
COPS3-207ENST00000477299 RALGAPA2Q2PPJ7 1873 aa17.35■□□□□ 0.37
COPS3-207ENST00000477299 ARL5CA6NH57 179 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms