RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 ORC4O43929 436 aa5.34□□□□□ -1.55
CCDC39-204ENST00000476379 SGPL1O95470 568 aa5.34□□□□□ -1.55
CCDC39-204ENST00000476379 PDE6CP51160 858 aa5.34□□□□□ -1.55
CCDC39-204ENST00000476379 STAT2P52630 851 aa5.34□□□□□ -1.55
CCDC39-204ENST00000476379 NOP14P78316 857 aaKnown RBP5.34□□□□□ -1.55
CCDC39-204ENST00000476379 DNAJC3Q13217 504 aa5.34□□□□□ -1.55
CCDC39-204ENST00000476379 CBWD6Q4V339 395 aa5.34□□□□□ -1.55
CCDC39-204ENST00000476379 ATP13A4Q4VNC1 1196 aa5.34□□□□□ -1.55
CCDC39-204ENST00000476379 WDR44Q5JSH3 913 aa5.34□□□□□ -1.55
CCDC39-204ENST00000476379 CBWD3Q5JTY5 395 aa5.34□□□□□ -1.55
CCDC39-204ENST00000476379 CBWD5Q5RIA9 395 aa5.34□□□□□ -1.55
CCDC39-204ENST00000476379 GJC2Q5T442 439 aaPredicted RBP5.34□□□□□ -1.55
CCDC39-204ENST00000476379 EMBQ6PCB8 327 aa5.34□□□□□ -1.55
CCDC39-204ENST00000476379 LONP2Q86WA8 852 aa5.34□□□□□ -1.55
CCDC39-204ENST00000476379 LRRC34Q8IZ02 419 aa5.34□□□□□ -1.55
CCDC39-204ENST00000476379 MYCBPAPQ8TBZ2 947 aa5.34□□□□□ -1.55
CCDC39-204ENST00000476379 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.34□□□□□ -1.55
CCDC39-204ENST00000476379 ZBTB10Q96DT7 871 aa5.34□□□□□ -1.55
CCDC39-204ENST00000476379 RPGRIP1Q96KN7 1286 aa5.34□□□□□ -1.55
CCDC39-204ENST00000476379 NLRP4Q96MN2 994 aa5.34□□□□□ -1.55
CCDC39-204ENST00000476379 TMEM237Q96Q45 408 aa5.34□□□□□ -1.55
CCDC39-204ENST00000476379 WDR11Q9BZH6 1224 aa5.34□□□□□ -1.55
CCDC39-204ENST00000476379 ACSS2Q9NR19 701 aa5.34□□□□□ -1.55
CCDC39-204ENST00000476379 LARSQ9P2J5 1176 aaKnown RBP5.34□□□□□ -1.55
CCDC39-204ENST00000476379 AJAP1Q9UKB5 411 aaPredicted RBP5.34□□□□□ -1.55
CCDC39-204ENST00000476379 ALG6Q9Y672 507 aa5.34□□□□□ -1.55
CCDC39-204ENST00000476379 TRIOO75962 3097 aa5.34□□□□□ -1.55
CCDC39-204ENST00000476379 TARSL2A2RTX5 802 aaKnown RBP5.34□□□□□ -1.55
CCDC39-204ENST00000476379 AGPSO00116 658 aa5.34□□□□□ -1.55
CCDC39-204ENST00000476379 PPFIA2O75334 1257 aa5.34□□□□□ -1.55
CCDC39-204ENST00000476379 PGK2P07205 417 aa5.34□□□□□ -1.55
CCDC39-204ENST00000476379 ZSCAN5DPP0CG00 497 aa5.34□□□□□ -1.55
CCDC39-204ENST00000476379 BRAFP15056 766 aa5.34□□□□□ -1.55
CCDC39-204ENST00000476379 ATF2P15336 505 aa5.34□□□□□ -1.55
CCDC39-204ENST00000476379 PON1P27169 355 aa5.34□□□□□ -1.55
CCDC39-204ENST00000476379 PIK3CAP42336 1068 aa5.34□□□□□ -1.55
CCDC39-204ENST00000476379 PMS2P54278 862 aa5.34□□□□□ -1.55
CCDC39-204ENST00000476379 PPP2R2AP63151 447 aa5.34□□□□□ -1.55
CCDC39-204ENST00000476379 LRRC63Q05C16 580 aa5.34□□□□□ -1.55
CCDC39-204ENST00000476379 GNPTABQ3T906 1256 aa5.34□□□□□ -1.55
CCDC39-204ENST00000476379 PPP6R3Q5H9R7 873 aaPredicted RBP5.34□□□□□ -1.55
CCDC39-204ENST00000476379 KDELC2Q7Z4H8 507 aa5.34□□□□□ -1.55
CCDC39-204ENST00000476379 SH3RF1Q7Z6J0 888 aa5.34□□□□□ -1.55
CCDC39-204ENST00000476379 SLC47A2Q86VL8 602 aa5.34□□□□□ -1.55
CCDC39-204ENST00000476379 TRIM59Q8IWR1 403 aa5.34□□□□□ -1.55
CCDC39-204ENST00000476379 USP38Q8NB14 1042 aa5.34□□□□□ -1.55
CCDC39-204ENST00000476379 RNF169Q8NCN4 708 aa5.34□□□□□ -1.55
CCDC39-204ENST00000476379 TBC1D22AQ8WUA7 517 aa5.34□□□□□ -1.55
CCDC39-204ENST00000476379 RMDN2Q96LZ7 410 aa5.34□□□□□ -1.55
CCDC39-204ENST00000476379 INTS2Q9H0H0 1204 aaKnown RBP5.34□□□□□ -1.55
CCDC39-204ENST00000476379 NHSQ6T4R5 1651 aa5.34□□□□□ -1.56
CCDC39-204ENST00000476379 MYO15AQ9UKN7 3530 aa5.34□□□□□ -1.56
CCDC39-204ENST00000476379 DENND3A2RUS2 1198 aa5.34□□□□□ -1.56
CCDC39-204ENST00000476379 PALM3A6NDB9 673 aaPredicted RBP5.34□□□□□ -1.56
CCDC39-204ENST00000476379 A8MUI8 341 aa5.34□□□□□ -1.56
CCDC39-204ENST00000476379 RASA4BC9J798 803 aa5.34□□□□□ -1.56
CCDC39-204ENST00000476379 INO80B-WBP1J3KQ70 363 aa5.34□□□□□ -1.56
CCDC39-204ENST00000476379 IPO5O00410 1097 aaKnown RBP5.34□□□□□ -1.56
CCDC39-204ENST00000476379 MEFVO15553 781 aaPredicted RBP5.34□□□□□ -1.56
CCDC39-204ENST00000476379 RASA4O43374 803 aa5.34□□□□□ -1.56
CCDC39-204ENST00000476379 PPP1R11O60927 126 aaPredicted RBP5.34□□□□□ -1.56
CCDC39-204ENST00000476379 CAPN15O75808 1086 aa5.34□□□□□ -1.56
CCDC39-204ENST00000476379 F7P08709 466 aaPredicted RBP5.34□□□□□ -1.56
CCDC39-204ENST00000476379 CETN2P41208 172 aa5.34□□□□□ -1.56
CCDC39-204ENST00000476379 NSFP46459 744 aaKnown RBP5.34□□□□□ -1.56
CCDC39-204ENST00000476379 ZNF157P51786 506 aaPredicted RBP5.34□□□□□ -1.56
CCDC39-204ENST00000476379 CORO7P57737 925 aa5.34□□□□□ -1.56
CCDC39-204ENST00000476379 AMPD2Q01433 879 aa5.34□□□□□ -1.56
CCDC39-204ENST00000476379 ASPRV1Q53RT3 343 aa5.34□□□□□ -1.56
CCDC39-204ENST00000476379 RAPGEF5Q92565 580 aa5.34□□□□□ -1.56
CCDC39-204ENST00000476379 MAML1Q92585 1016 aa5.34□□□□□ -1.56
CCDC39-204ENST00000476379 IMPG2Q9BZV3 1241 aa5.34□□□□□ -1.56
CCDC39-204ENST00000476379 SLC13A1Q9BZW2 595 aa5.34□□□□□ -1.56
CCDC39-204ENST00000476379 INO80BQ9C086 356 aaPredicted RBP5.34□□□□□ -1.56
CCDC39-204ENST00000476379 RAB17Q9H0T7 212 aa5.34□□□□□ -1.56
CCDC39-204ENST00000476379 ETNK1Q9HBU6 452 aa5.34□□□□□ -1.56
CCDC39-204ENST00000476379 ARHGEF10LQ9HCE6 1279 aa5.34□□□□□ -1.56
CCDC39-204ENST00000476379 ERVK-5Q9HDB9 667 aa5.34□□□□□ -1.56
CCDC39-204ENST00000476379 PICK1Q9NRD5 415 aa5.34□□□□□ -1.56
CCDC39-204ENST00000476379 KLC4Q9NSK0 619 aa5.34□□□□□ -1.56
CCDC39-204ENST00000476379 RNF14Q9UBS8 474 aa5.34□□□□□ -1.56
CCDC39-204ENST00000476379 STK17AQ9UEE5 414 aa5.34□□□□□ -1.56
CCDC39-204ENST00000476379 PACSIN3Q9UKS6 424 aa5.34□□□□□ -1.56
CCDC39-204ENST00000476379 HEY1Q9Y5J3 304 aa5.34□□□□□ -1.56
CCDC39-204ENST00000476379 SPEGQ15772 3267 aa5.34□□□□□ -1.56
CCDC39-204ENST00000476379 EXOC1LA0A1B0GW35 172 aa5.33□□□□□ -1.56
CCDC39-204ENST00000476379 A0A1W2PQC6 194 aa5.33□□□□□ -1.56
CCDC39-204ENST00000476379 ARHGAP42A6NI28 874 aa5.33□□□□□ -1.56
CCDC39-204ENST00000476379 GOLGA8CPA6NN73 597 aa5.33□□□□□ -1.56
CCDC39-204ENST00000476379 MSH4O15457 936 aa5.33□□□□□ -1.56
CCDC39-204ENST00000476379 ATP11AP98196 1134 aa5.33□□□□□ -1.56
CCDC39-204ENST00000476379 CYP4A22Q5TCH4 519 aa5.33□□□□□ -1.56
CCDC39-204ENST00000476379 MCTP2Q6DN12 878 aa5.33□□□□□ -1.56
CCDC39-204ENST00000476379 HACE1Q8IYU2 909 aa5.33□□□□□ -1.56
CCDC39-204ENST00000476379 ZNF564Q8TBZ8 553 aaPredicted RBP5.33□□□□□ -1.56
CCDC39-204ENST00000476379 MCUR1Q96AQ8 359 aa5.33□□□□□ -1.56
CCDC39-204ENST00000476379 LENG1Q96BZ8 264 aaPredicted RBP5.33□□□□□ -1.56
CCDC39-204ENST00000476379 CFAP36Q96G28 342 aa5.33□□□□□ -1.56
CCDC39-204ENST00000476379 SEC16BQ96JE7 1060 aa5.33□□□□□ -1.56
CCDC39-204ENST00000476379 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms