RNA–Protein interactions for RNA: ENST00000476367.5

CCNL1-217, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-217ENST00000476367 COL4A4P53420 1690 aaPredicted RBP15.79■□□□□ 0.12
CCNL1-217ENST00000476367 TDRD15B5MCY1 1934 aaKnown RBP15.78■□□□□ 0.12
CCNL1-217ENST00000476367 A0A1B0GUA9 196 aa15.78■□□□□ 0.12
CCNL1-217ENST00000476367 TBKBP1A7MCY6 615 aa15.78■□□□□ 0.12
CCNL1-217ENST00000476367 MEIS3P2A8K0S8 358 aa15.78■□□□□ 0.12
CCNL1-217ENST00000476367 H0YCG3 227 aa15.78■□□□□ 0.12
CCNL1-217ENST00000476367 BIN1O00499 593 aa15.78■□□□□ 0.12
CCNL1-217ENST00000476367 GCNT3O95395 438 aa15.78■□□□□ 0.12
CCNL1-217ENST00000476367 PROZP22891 400 aa15.78■□□□□ 0.12
CCNL1-217ENST00000476367 BTG3Q14201 252 aaPredicted RBP15.78■□□□□ 0.12
CCNL1-217ENST00000476367 BMT2Q1RMZ1 405 aa15.78■□□□□ 0.12
CCNL1-217ENST00000476367 ATF7IP2Q5U623 682 aa15.78■□□□□ 0.12
CCNL1-217ENST00000476367 Q7L0L9 218 aa15.78■□□□□ 0.12
CCNL1-217ENST00000476367 ZNF598Q86UK7 904 aaKnown RBP15.78■□□□□ 0.12
CCNL1-217ENST00000476367 MAP4K3Q8IVH8 894 aa15.78■□□□□ 0.12
CCNL1-217ENST00000476367 ABI1Q8IZP0 508 aa15.78■□□□□ 0.12
CCNL1-217ENST00000476367 SMARCE1Q969G3 411 aa15.78■□□□□ 0.12
CCNL1-217ENST00000476367 BICD1Q96G01 975 aa15.78■□□□□ 0.12
CCNL1-217ENST00000476367 ZBTB45Q96K62 511 aaPredicted RBP15.78■□□□□ 0.12
CCNL1-217ENST00000476367 ACO2Q99798 780 aaKnown RBP15.78■□□□□ 0.12
CCNL1-217ENST00000476367 ADPGKQ9BRR6 497 aa15.78■□□□□ 0.12
CCNL1-217ENST00000476367 TARS2Q9BW92 718 aaKnown RBP15.78■□□□□ 0.12
CCNL1-217ENST00000476367 NXF3Q9H4D5 531 aaKnown RBP15.78■□□□□ 0.12
CCNL1-217ENST00000476367 EXOC1Q9NV70 894 aa15.78■□□□□ 0.12
CCNL1-217ENST00000476367 RNF216Q9NWF9 866 aaPredicted RBP15.78■□□□□ 0.12
CCNL1-217ENST00000476367 MTUS1Q9ULD2 1270 aa15.78■□□□□ 0.12
CCNL1-217ENST00000476367 HES2Q9Y543 173 aa15.78■□□□□ 0.12
CCNL1-217ENST00000476367 IPPQ9Y573 584 aa15.78■□□□□ 0.12
CCNL1-217ENST00000476367 ANK1P16157 1881 aa15.77■□□□□ 0.12
CCNL1-217ENST00000476367 ANKRD63C9JTQ0 380 aa15.77■□□□□ 0.12
CCNL1-217ENST00000476367 TGFB1I1O43294 461 aa15.77■□□□□ 0.12
CCNL1-217ENST00000476367 PIGRP01833 764 aa15.77■□□□□ 0.12
CCNL1-217ENST00000476367 SKIP12755 728 aa15.77■□□□□ 0.12
CCNL1-217ENST00000476367 ADSSP30520 456 aa15.77■□□□□ 0.12
CCNL1-217ENST00000476367 TAP1Q03518 808 aa15.77■□□□□ 0.12
CCNL1-217ENST00000476367 PSMD2Q13200 908 aa15.77■□□□□ 0.12
CCNL1-217ENST00000476367 ZNF568Q3ZCX4 644 aa15.77■□□□□ 0.12
CCNL1-217ENST00000476367 CLLU1OSQ5K130 101 aa15.77■□□□□ 0.12
CCNL1-217ENST00000476367 L1TD1Q5T7N2 865 aaKnown RBP15.77■□□□□ 0.12
CCNL1-217ENST00000476367 SMG8Q8ND04 991 aaKnown RBP15.77■□□□□ 0.12
CCNL1-217ENST00000476367 HELQQ8TDG4 1101 aa15.77■□□□□ 0.12
CCNL1-217ENST00000476367 ZNF689Q96CS4 500 aaPredicted RBP15.77■□□□□ 0.12
CCNL1-217ENST00000476367 TTYH1Q9H313 450 aaPredicted RBP15.77■□□□□ 0.12
CCNL1-217ENST00000476367 KCTD10Q9H3F6 313 aa15.77■□□□□ 0.12
CCNL1-217ENST00000476367 CERS4Q9HA82 394 aa15.77■□□□□ 0.12
CCNL1-217ENST00000476367 RNF19AQ9NV58 838 aa15.77■□□□□ 0.12
CCNL1-217ENST00000476367 ANKFY1Q9P2R3 1169 aa15.77■□□□□ 0.12
CCNL1-217ENST00000476367 MAPK8IP1Q9UQF2 711 aa15.77■□□□□ 0.12
CCNL1-217ENST00000476367 CITO14578 2027 aa15.76■□□□□ 0.11
CCNL1-217ENST00000476367 LINC01553A4QN01 128 aa15.76■□□□□ 0.11
CCNL1-217ENST00000476367 HNRNPDLO14979 420 aaKnown RBP15.76■□□□□ 0.11
CCNL1-217ENST00000476367 EIF3DO15371 548 aaKnown RBP eCLIP15.76■□□□□ 0.11
CCNL1-217ENST00000476367 EOMESO95936 686 aa15.76■□□□□ 0.11
CCNL1-217ENST00000476367 HARSP12081 509 aaKnown RBP15.76■□□□□ 0.11
CCNL1-217ENST00000476367 PRCPP42785 496 aa15.76■□□□□ 0.11
CCNL1-217ENST00000476367 CCDC183Q5T5S1 534 aa15.76■□□□□ 0.11
CCNL1-217ENST00000476367 ZNF658Q5TYW1 1059 aaPredicted RBP15.76■□□□□ 0.11
CCNL1-217ENST00000476367 SP7Q8TDD2 431 aaPredicted RBP15.76■□□□□ 0.11
CCNL1-217ENST00000476367 MED15Q96RN5 788 aa15.76■□□□□ 0.11
CCNL1-217ENST00000476367 ZNF576Q9H609 170 aa15.76■□□□□ 0.11
CCNL1-217ENST00000476367 HCSTQ9UBK5 93 aa15.76■□□□□ 0.11
CCNL1-217ENST00000476367 INPP5FQ9Y2H2 1132 aa15.76■□□□□ 0.11
CCNL1-217ENST00000476367 PPP1R3GB7ZBB8 358 aa15.76■□□□□ 0.11
CCNL1-217ENST00000476367 HOXA2O43364 376 aa15.76■□□□□ 0.11
CCNL1-217ENST00000476367 FAM189A1O60320 539 aa15.76■□□□□ 0.11
CCNL1-217ENST00000476367 ZNF623O75123 536 aa15.76■□□□□ 0.11
CCNL1-217ENST00000476367 SMC2O95347 1197 aa15.76■□□□□ 0.11
CCNL1-217ENST00000476367 COBLL1Q53SF7 1204 aa15.76■□□□□ 0.11
CCNL1-217ENST00000476367 ZBTB33Q86T24 672 aa15.76■□□□□ 0.11
CCNL1-217ENST00000476367 CMTR2Q8IYT2 770 aaKnown RBP15.76■□□□□ 0.11
CCNL1-217ENST00000476367 FIBCD1Q8N539 461 aa15.76■□□□□ 0.11
CCNL1-217ENST00000476367 ZSWIM2Q8NEG5 633 aa15.76■□□□□ 0.11
CCNL1-217ENST00000476367 PGBD4Q96DM1 585 aa15.76■□□□□ 0.11
CCNL1-217ENST00000476367 TMEM117Q9H0C3 514 aa15.76■□□□□ 0.11
CCNL1-217ENST00000476367 HOOK1Q9UJC3 728 aaKnown RBP15.76■□□□□ 0.11
CCNL1-217ENST00000476367 TNFSF13BQ9Y275 285 aa15.76■□□□□ 0.11
CCNL1-217ENST00000476367 TMEM265A0A087WTH1 108 aa15.75■□□□□ 0.11
CCNL1-217ENST00000476367 MEFVO15553 781 aaPredicted RBP15.75■□□□□ 0.11
CCNL1-217ENST00000476367 ITGA4P13612 1032 aa15.75■□□□□ 0.11
CCNL1-217ENST00000476367 MATR3P43243 847 aaKnown RBP eCLIP15.75■□□□□ 0.11
CCNL1-217ENST00000476367 LIG4P49917 911 aa15.75■□□□□ 0.11
CCNL1-217ENST00000476367 DCAF4L1Q3SXM0 396 aa15.75■□□□□ 0.11
CCNL1-217ENST00000476367 ZCWPW2Q504Y3 356 aa15.75■□□□□ 0.11
CCNL1-217ENST00000476367 GLB1LQ6UWU2 654 aa15.75■□□□□ 0.11
CCNL1-217ENST00000476367 AGMOQ6ZNB7 445 aa15.75■□□□□ 0.11
CCNL1-217ENST00000476367 HACE1Q8IYU2 909 aa15.75■□□□□ 0.11
CCNL1-217ENST00000476367 DEFB123Q8N688 67 aa15.75■□□□□ 0.11
CCNL1-217ENST00000476367 SLC17A8Q8NDX2 589 aa15.75■□□□□ 0.11
CCNL1-217ENST00000476367 HVCN1Q96D96 273 aa15.75■□□□□ 0.11
CCNL1-217ENST00000476367 CCDC34Q96HJ3 373 aa15.75■□□□□ 0.11
CCNL1-217ENST00000476367 C17orf80Q9BSJ5 609 aa15.75■□□□□ 0.11
CCNL1-217ENST00000476367 TCHPQ9BT92 498 aa15.75■□□□□ 0.11
CCNL1-217ENST00000476367 CDT1Q9H211 546 aa15.75■□□□□ 0.11
CCNL1-217ENST00000476367 RNF39Q9H2S5 420 aa15.75■□□□□ 0.11
CCNL1-217ENST00000476367 SEMA6BQ9H3T3 888 aa15.75■□□□□ 0.11
CCNL1-217ENST00000476367 RSAD1Q9HA92 442 aa15.75■□□□□ 0.11
CCNL1-217ENST00000476367 PCDHB13Q9Y5F0 798 aa15.75■□□□□ 0.11
CCNL1-217ENST00000476367 MRPL42Q9Y6G3 142 aaKnown RBP15.75■□□□□ 0.11
CCNL1-217ENST00000476367 STYXL1Q9Y6J8 313 aa15.75■□□□□ 0.11
CCNL1-217ENST00000476367 AKAP5P24588 427 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms