RNA–Protein interactions for RNA: ENST00000476139.5

TVP23B-202, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 1 (best) BASIC

Gene TVP23B, Length 2,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-202ENST00000476139 ATMINO43313 823 aaPredicted RBP17.95■□□□□ 0.46
TVP23B-202ENST00000476139 GNPTABQ3T906 1256 aa17.95■□□□□ 0.46
TVP23B-202ENST00000476139 LMBRD2Q68DH5 695 aaPredicted RBP17.95■□□□□ 0.46
TVP23B-202ENST00000476139 SV2AQ7L0J3 742 aa17.95■□□□□ 0.46
TVP23B-202ENST00000476139 DDX42Q86XP3 938 aaKnown RBP eCLIP17.95■□□□□ 0.46
TVP23B-202ENST00000476139 FAM71AQ8IYT1 594 aa17.95■□□□□ 0.46
TVP23B-202ENST00000476139 SLC17A8Q8NDX2 589 aa17.95■□□□□ 0.46
TVP23B-202ENST00000476139 HELQQ8TDG4 1101 aa17.95■□□□□ 0.46
TVP23B-202ENST00000476139 BICD1Q96G01 975 aa17.95■□□□□ 0.46
TVP23B-202ENST00000476139 NCANO14594 1321 aa17.95■□□□□ 0.46
TVP23B-202ENST00000476139 MMEP08473 750 aa17.95■□□□□ 0.46
TVP23B-202ENST00000476139 ATP1A2P50993 1020 aa17.95■□□□□ 0.46
TVP23B-202ENST00000476139 TNNC1P63316 161 aa17.95■□□□□ 0.46
TVP23B-202ENST00000476139 ZNF211Q13398 564 aaPredicted RBP17.95■□□□□ 0.46
TVP23B-202ENST00000476139 BTBD7Q9P203 1132 aa17.95■□□□□ 0.46
TVP23B-202ENST00000476139 AMACRQ9UHK6 382 aa17.95■□□□□ 0.46
TVP23B-202ENST00000476139 ATP8B3O60423 1300 aa17.95■□□□□ 0.46
TVP23B-202ENST00000476139 DDX3YO15523 660 aaKnown RBP17.94■□□□□ 0.46
TVP23B-202ENST00000476139 DDNO94850 711 aaPredicted RBP17.94■□□□□ 0.46
TVP23B-202ENST00000476139 FGGP02679 453 aa17.94■□□□□ 0.46
TVP23B-202ENST00000476139 TNFRSF8P28908 595 aa17.94■□□□□ 0.46
TVP23B-202ENST00000476139 STXBP2Q15833 593 aa17.94■□□□□ 0.46
TVP23B-202ENST00000476139 TTMPQ5BVD1 217 aa17.94■□□□□ 0.46
TVP23B-202ENST00000476139 AADACL2Q6P093 401 aa17.94■□□□□ 0.46
TVP23B-202ENST00000476139 SRLQ86TD4 932 aa17.94■□□□□ 0.46
TVP23B-202ENST00000476139 MFSD14AQ96MC6 490 aa17.94■□□□□ 0.46
TVP23B-202ENST00000476139 FBXL18Q96ME1 805 aa17.94■□□□□ 0.46
TVP23B-202ENST00000476139 FEZ2Q9UHY8 353 aaPredicted RBP17.94■□□□□ 0.46
TVP23B-202ENST00000476139 NOCTQ9UK39 431 aaKnown RBP17.94■□□□□ 0.46
TVP23B-202ENST00000476139 SNCAIPQ9Y6H5 919 aa17.94■□□□□ 0.46
TVP23B-202ENST00000476139 NFASCO94856 1347 aa17.94■□□□□ 0.46
TVP23B-202ENST00000476139 HSF2BPO75031 334 aa17.94■□□□□ 0.46
TVP23B-202ENST00000476139 COPB2P35606 906 aa17.94■□□□□ 0.46
TVP23B-202ENST00000476139 WNT7BP56706 349 aa17.94■□□□□ 0.46
TVP23B-202ENST00000476139 ERVK-9P63128 1117 aa17.94■□□□□ 0.46
TVP23B-202ENST00000476139 CYP24A1Q07973 514 aa17.94■□□□□ 0.46
TVP23B-202ENST00000476139 SUPT20HL1Q3ZLR7 823 aa17.94■□□□□ 0.46
TVP23B-202ENST00000476139 FMNL3Q8IVF7 1028 aa17.94■□□□□ 0.46
TVP23B-202ENST00000476139 GPC2Q8N158 579 aa17.94■□□□□ 0.46
TVP23B-202ENST00000476139 RASGEF1CQ8N431 466 aa17.94■□□□□ 0.46
TVP23B-202ENST00000476139 CAVIN3Q969G5 261 aa17.94■□□□□ 0.46
TVP23B-202ENST00000476139 CDHR1Q96JP9 859 aa17.94■□□□□ 0.46
TVP23B-202ENST00000476139 ISCUQ9H1K1 167 aa17.94■□□□□ 0.46
TVP23B-202ENST00000476139 C17orf75Q9HAS0 396 aa17.94■□□□□ 0.46
TVP23B-202ENST00000476139 ATP6V0A4Q9HBG4 840 aa17.94■□□□□ 0.46
TVP23B-202ENST00000476139 TMEM8AQ9HCN3 771 aa17.94■□□□□ 0.46
TVP23B-202ENST00000476139 RAB20Q9NX57 234 aa17.94■□□□□ 0.46
TVP23B-202ENST00000476139 CTTNBP2NLQ9P2B4 639 aa17.94■□□□□ 0.46
TVP23B-202ENST00000476139 ALG6Q9Y672 507 aa17.94■□□□□ 0.46
TVP23B-202ENST00000476139 IVLP07476 585 aa17.94■□□□□ 0.46
TVP23B-202ENST00000476139 SUPT20HL2P0C7V6 817 aa17.94■□□□□ 0.46
TVP23B-202ENST00000476139 MIS18BP1Q6P0N0 1132 aa17.94■□□□□ 0.46
TVP23B-202ENST00000476139 EEPD1Q7L9B9 569 aa17.94■□□□□ 0.46
TVP23B-202ENST00000476139 FBXL13Q8NEE6 735 aa17.94■□□□□ 0.46
TVP23B-202ENST00000476139 MCPH1Q8NEM0 835 aa17.94■□□□□ 0.46
TVP23B-202ENST00000476139 ALG3Q92685 438 aa17.94■□□□□ 0.46
TVP23B-202ENST00000476139 POLR2AP24928 1970 aaKnown RBP17.93■□□□□ 0.46
TVP23B-202ENST00000476139 HLTFQ14527 1009 aaKnown RBP eCLIP17.93■□□□□ 0.46
TVP23B-202ENST00000476139 BRDTQ58F21 947 aaPredicted RBP17.93■□□□□ 0.46
TVP23B-202ENST00000476139 ZNF516Q92618 1163 aa17.93■□□□□ 0.46
TVP23B-202ENST00000476139 CELF4Q9BZC1 486 aaKnown RBP17.93■□□□□ 0.46
TVP23B-202ENST00000476139 ARHGAP28Q9P2N2 729 aa17.93■□□□□ 0.46
TVP23B-202ENST00000476139 TMEM110-MUSTN1A8MSY1 372 aa17.93■□□□□ 0.46
TVP23B-202ENST00000476139 PMM2O15305 246 aa17.93■□□□□ 0.46
TVP23B-202ENST00000476139 ACOT2P49753 483 aa17.93■□□□□ 0.46
TVP23B-202ENST00000476139 IRAK1P51617 712 aa17.93■□□□□ 0.46
TVP23B-202ENST00000476139 POLGP54098 1239 aaPredicted RBP17.93■□□□□ 0.46
TVP23B-202ENST00000476139 MFAP3P55082 362 aa17.93■□□□□ 0.46
TVP23B-202ENST00000476139 XKR3Q5GH77 459 aa17.93■□□□□ 0.46
TVP23B-202ENST00000476139 GPD1LQ8N335 351 aa17.93■□□□□ 0.46
TVP23B-202ENST00000476139 SHC3Q92529 594 aa17.93■□□□□ 0.46
TVP23B-202ENST00000476139 IFT74Q96LB3 600 aa17.93■□□□□ 0.46
TVP23B-202ENST00000476139 COQ4Q9Y3A0 265 aa17.93■□□□□ 0.46
TVP23B-202ENST00000476139 SYNGAP1Q96PV0 1343 aa17.93■□□□□ 0.46
TVP23B-202ENST00000476139 GPC3P51654 580 aa17.92■□□□□ 0.46
TVP23B-202ENST00000476139 NOL9Q5SY16 702 aaKnown RBP17.92■□□□□ 0.46
TVP23B-202ENST00000476139 ZBTB45Q96K62 511 aaPredicted RBP17.92■□□□□ 0.46
TVP23B-202ENST00000476139 BTBD6Q96KE9 485 aa17.92■□□□□ 0.46
TVP23B-202ENST00000476139 ZNF302Q9NR11 478 aa17.92■□□□□ 0.46
TVP23B-202ENST00000476139 DAAM1Q9Y4D1 1078 aa17.92■□□□□ 0.46
TVP23B-202ENST00000476139 DKC1O60832 514 aaKnown RBP eCLIP17.92■□□□□ 0.46
TVP23B-202ENST00000476139 CYP11B1P15538 503 aa17.92■□□□□ 0.46
TVP23B-202ENST00000476139 MCCD1P59942 119 aaPredicted RBP17.92■□□□□ 0.46
TVP23B-202ENST00000476139 FMO1Q01740 532 aa17.92■□□□□ 0.46
TVP23B-202ENST00000476139 PAK2Q13177 524 aa17.92■□□□□ 0.46
TVP23B-202ENST00000476139 EMC2Q15006 297 aa17.92■□□□□ 0.46
TVP23B-202ENST00000476139 CPNE8Q86YQ8 564 aa17.92■□□□□ 0.46
TVP23B-202ENST00000476139 HVCN1Q96D96 273 aa17.92■□□□□ 0.46
TVP23B-202ENST00000476139 HAPLN2Q9GZV7 340 aa17.92■□□□□ 0.46
TVP23B-202ENST00000476139 CENPHQ9H3R5 247 aa17.92■□□□□ 0.46
TVP23B-202ENST00000476139 MAFBQ9Y5Q3 323 aaPredicted RBP17.92■□□□□ 0.46
TVP23B-202ENST00000476139 ADM5C9JUS6 153 aa17.91■□□□□ 0.46
TVP23B-202ENST00000476139 MARCKSL1P49006 195 aa17.91■□□□□ 0.46
TVP23B-202ENST00000476139 GNGT1P63211 74 aa17.91■□□□□ 0.46
TVP23B-202ENST00000476139 GPC5P78333 572 aa17.91■□□□□ 0.46
TVP23B-202ENST00000476139 SH3D19Q5HYK7 790 aa17.91■□□□□ 0.46
TVP23B-202ENST00000476139 LBX2Q6XYB7 198 aa17.91■□□□□ 0.46
TVP23B-202ENST00000476139 KRT35Q92764 455 aa17.91■□□□□ 0.46
TVP23B-202ENST00000476139 RTN2O75298 545 aa17.91■□□□□ 0.46
TVP23B-202ENST00000476139 STAM2O75886 525 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms