RNA–Protein interactions for RNA: ENST00000475524.1

MCF2L-224, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-224ENST00000475524 CDT1Q9H211 546 aa16.56■□□□□ 0.24
MCF2L-224ENST00000475524 TSPY26PQ9H489 355 aa16.56■□□□□ 0.24
MCF2L-224ENST00000475524 RGS18Q9NS28 235 aa16.56■□□□□ 0.24
MCF2L-224ENST00000475524 A0A0U1RQF3 1178 aa16.55■□□□□ 0.24
MCF2L-224ENST00000475524 NR3C1P04150 777 aa16.55■□□□□ 0.24
MCF2L-224ENST00000475524 ACTN1P12814 892 aa16.55■□□□□ 0.24
MCF2L-224ENST00000475524 CSF2RAP15509 400 aa16.55■□□□□ 0.24
MCF2L-224ENST00000475524 ZNF165P49910 485 aa16.55■□□□□ 0.24
MCF2L-224ENST00000475524 MYL5Q02045 173 aa16.55■□□□□ 0.24
MCF2L-224ENST00000475524 UBXN11Q5T124 520 aa16.55■□□□□ 0.24
MCF2L-224ENST00000475524 SPATA1Q5VX52 437 aa16.55■□□□□ 0.24
MCF2L-224ENST00000475524 EEF1DP3Q658K8 133 aa16.55■□□□□ 0.24
MCF2L-224ENST00000475524 ANKRD40Q6AI12 368 aa16.55■□□□□ 0.24
MCF2L-224ENST00000475524 TWF2Q6IBS0 349 aaKnown RBP16.55■□□□□ 0.24
MCF2L-224ENST00000475524 PSRC1Q6PGN9 363 aaPredicted RBP16.55■□□□□ 0.24
MCF2L-224ENST00000475524 SLC24A5Q71RS6 500 aa16.55■□□□□ 0.24
MCF2L-224ENST00000475524 XXYLT1Q8NBI6 393 aa16.55■□□□□ 0.24
MCF2L-224ENST00000475524 VWCEQ96DN2 955 aa16.55■□□□□ 0.24
MCF2L-224ENST00000475524 CPB2Q96IY4 423 aa16.55■□□□□ 0.24
MCF2L-224ENST00000475524 LBHD1Q9BQE6 289 aaPredicted RBP16.55■□□□□ 0.24
MCF2L-224ENST00000475524 TCHPQ9BT92 498 aa16.55■□□□□ 0.24
MCF2L-224ENST00000475524 MSTO1Q9BUK6 570 aa16.55■□□□□ 0.24
MCF2L-224ENST00000475524 GZF1Q9H116 711 aaPredicted RBP16.55■□□□□ 0.24
MCF2L-224ENST00000475524 ELAC1Q9H777 363 aaKnown RBP16.55■□□□□ 0.24
MCF2L-224ENST00000475524 FAM105AQ9NUU6 356 aa16.55■□□□□ 0.24
MCF2L-224ENST00000475524 ANKFY1Q9P2R3 1169 aa16.55■□□□□ 0.24
MCF2L-224ENST00000475524 AGO2Q9UKV8 859 aaKnown RBP16.55■□□□□ 0.24
MCF2L-224ENST00000475524 CITO14578 2027 aa16.54■□□□□ 0.24
MCF2L-224ENST00000475524 CETN3O15182 167 aa16.54■□□□□ 0.24
MCF2L-224ENST00000475524 SLC16A3O15427 465 aaKnown RBP16.54■□□□□ 0.24
MCF2L-224ENST00000475524 EXTL3O43909 919 aa16.54■□□□□ 0.24
MCF2L-224ENST00000475524 FAM189A1O60320 539 aa16.54■□□□□ 0.24
MCF2L-224ENST00000475524 NR2F2P24468 414 aa16.54■□□□□ 0.24
MCF2L-224ENST00000475524 GRM5P41594 1212 aa16.54■□□□□ 0.24
MCF2L-224ENST00000475524 PMS1P54277 932 aaKnown RBP16.54■□□□□ 0.24
MCF2L-224ENST00000475524 FAM189BP81408 668 aa16.54■□□□□ 0.24
MCF2L-224ENST00000475524 IKBKEQ14164 716 aa16.54■□□□□ 0.24
MCF2L-224ENST00000475524 MRPL10Q7Z7H8 261 aaKnown RBP16.54■□□□□ 0.24
MCF2L-224ENST00000475524 GPD1LQ8N335 351 aa16.54■□□□□ 0.24
MCF2L-224ENST00000475524 CSGALNACT2Q8N6G5 542 aa16.54■□□□□ 0.24
MCF2L-224ENST00000475524 BADQ92934 168 aa16.54■□□□□ 0.24
MCF2L-224ENST00000475524 TSPAN18Q96SJ8 248 aa16.54■□□□□ 0.24
MCF2L-224ENST00000475524 DUSP9Q99956 384 aaKnown RBP16.54■□□□□ 0.24
MCF2L-224ENST00000475524 ADAM2Q99965 735 aa16.54■□□□□ 0.24
MCF2L-224ENST00000475524 CBWD1Q9BRT8 395 aa16.54■□□□□ 0.24
MCF2L-224ENST00000475524 TRIM6Q9C030 488 aaPredicted RBP16.54■□□□□ 0.24
MCF2L-224ENST00000475524 HSPBP1Q9NZL4 362 aa16.54■□□□□ 0.24
MCF2L-224ENST00000475524 TRIM49BA6NDI0 452 aa16.53■□□□□ 0.24
MCF2L-224ENST00000475524 SMTNL1A8MU46 457 aa16.53■□□□□ 0.24
MCF2L-224ENST00000475524 C9IYK1 514 aa16.53■□□□□ 0.24
MCF2L-224ENST00000475524 MGEA5O60502 916 aa16.53■□□□□ 0.24
MCF2L-224ENST00000475524 GNA14O95837 355 aa16.53■□□□□ 0.24
MCF2L-224ENST00000475524 EOMESO95936 686 aa16.53■□□□□ 0.24
MCF2L-224ENST00000475524 MATR3P43243 847 aaKnown RBP eCLIP16.53■□□□□ 0.24
MCF2L-224ENST00000475524 MCCD1P59942 119 aaPredicted RBP16.53■□□□□ 0.24
MCF2L-224ENST00000475524 ADAM9Q13443 819 aa16.53■□□□□ 0.24
MCF2L-224ENST00000475524 LRRC55Q6ZSA7 311 aa16.53■□□□□ 0.24
MCF2L-224ENST00000475524 FILIP1Q7Z7B0 1213 aa16.53■□□□□ 0.24
MCF2L-224ENST00000475524 DEFB128Q7Z7B8 93 aa16.53■□□□□ 0.24
MCF2L-224ENST00000475524 FAM200AQ8TCP9 573 aa16.53■□□□□ 0.24
MCF2L-224ENST00000475524 PGBD4Q96DM1 585 aa16.53■□□□□ 0.24
MCF2L-224ENST00000475524 ZBTB45Q96K62 511 aaPredicted RBP16.53■□□□□ 0.24
MCF2L-224ENST00000475524 MED15Q96RN5 788 aa16.53■□□□□ 0.24
MCF2L-224ENST00000475524 CCDC94Q9BW85 323 aaPredicted RBP16.53■□□□□ 0.24
MCF2L-224ENST00000475524 HAPLN2Q9GZV7 340 aa16.53■□□□□ 0.24
MCF2L-224ENST00000475524 THAP9Q9H5L6 903 aa16.53■□□□□ 0.24
MCF2L-224ENST00000475524 UBN1Q9NPG3 1134 aa16.53■□□□□ 0.24
MCF2L-224ENST00000475524 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.53■□□□□ 0.24
MCF2L-224ENST00000475524 TTC3P53804 2025 aa16.53■□□□□ 0.24
MCF2L-224ENST00000475524 ANK1P16157 1881 aa16.52■□□□□ 0.24
MCF2L-224ENST00000475524 PDCD11Q14690 1871 aaKnown RBP16.52■□□□□ 0.24
MCF2L-224ENST00000475524 TISP43B9A030 160 aa16.52■□□□□ 0.24
MCF2L-224ENST00000475524 NPTXRO95502 500 aa16.52■□□□□ 0.24
MCF2L-224ENST00000475524 CLTAP09496 248 aa16.52■□□□□ 0.24
MCF2L-224ENST00000475524 PRKCSHP14314 528 aaPredicted RBP16.52■□□□□ 0.24
MCF2L-224ENST00000475524 MARSP56192 900 aaKnown RBP16.52■□□□□ 0.24
MCF2L-224ENST00000475524 FAM114A1Q8IWE2 563 aa16.52■□□□□ 0.24
MCF2L-224ENST00000475524 CD302Q8IX05 232 aa16.52■□□□□ 0.24
MCF2L-224ENST00000475524 LINC01599Q8WXQ3 324 aa16.52■□□□□ 0.24
MCF2L-224ENST00000475524 IKZF4Q9H2S9 585 aa16.52■□□□□ 0.24
MCF2L-224ENST00000475524 PLEKHA5Q9HAU0 1116 aa16.52■□□□□ 0.24
MCF2L-224ENST00000475524 METTL14Q9HCE5 456 aaKnown RBP16.52■□□□□ 0.24
MCF2L-224ENST00000475524 TOPORSQ9NS56 1045 aaPredicted RBP16.52■□□□□ 0.24
MCF2L-224ENST00000475524 CPSF3Q9UKF6 684 aaKnown RBP16.52■□□□□ 0.24
MCF2L-224ENST00000475524 USP20Q9Y2K6 914 aa16.52■□□□□ 0.24
MCF2L-224ENST00000475524 FRMD4BQ9Y2L6 1034 aa16.52■□□□□ 0.24
MCF2L-224ENST00000475524 PCDHB2Q9Y5E7 798 aa16.52■□□□□ 0.24
MCF2L-224ENST00000475524 ZNF233A6NK53 670 aa16.51■□□□□ 0.23
MCF2L-224ENST00000475524 ENPP3O14638 875 aa16.51■□□□□ 0.23
MCF2L-224ENST00000475524 CLIC2O15247 247 aa16.51■□□□□ 0.23
MCF2L-224ENST00000475524 INPPL1O15357 1258 aa16.51■□□□□ 0.23
MCF2L-224ENST00000475524 EXOC3O60645 756 aa16.51■□□□□ 0.23
MCF2L-224ENST00000475524 ADRB2P07550 413 aa16.51■□□□□ 0.23
MCF2L-224ENST00000475524 PSMC2P35998 433 aaKnown RBP16.51■□□□□ 0.23
MCF2L-224ENST00000475524 STX17P56962 302 aa16.51■□□□□ 0.23
MCF2L-224ENST00000475524 IQCB1Q15051 598 aa16.51■□□□□ 0.23
MCF2L-224ENST00000475524 SURF1Q15526 300 aa16.51■□□□□ 0.23
MCF2L-224ENST00000475524 TPD52L1Q16890 204 aaPredicted RBP16.51■□□□□ 0.23
MCF2L-224ENST00000475524 USP37Q86T82 979 aa16.51■□□□□ 0.23
MCF2L-224ENST00000475524 ZNF598Q86UK7 904 aaKnown RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms