RNA–Protein interactions for RNA: ENST00000475470.1

RPUSD3-215, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,413 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-215ENST00000475470 TRIM50Q86XT4 487 aa16.61■□□□□ 0.25
RPUSD3-215ENST00000475470 OLIG1Q8TAK6 271 aa16.61■□□□□ 0.25
RPUSD3-215ENST00000475470 KAT5Q92993 513 aa16.61■□□□□ 0.25
RPUSD3-215ENST00000475470 AGPAT1Q99943 283 aa16.61■□□□□ 0.25
RPUSD3-215ENST00000475470 STYXL1Q9Y6J8 313 aa16.61■□□□□ 0.25
RPUSD3-215ENST00000475470 A0A0A6YYK5 440 aaPredicted RBP16.61■□□□□ 0.25
RPUSD3-215ENST00000475470 PIGRP01833 764 aa16.61■□□□□ 0.25
RPUSD3-215ENST00000475470 GTF2A2P52657 109 aa16.61■□□□□ 0.25
RPUSD3-215ENST00000475470 C2orf54Q08AI8 447 aa16.61■□□□□ 0.25
RPUSD3-215ENST00000475470 CAPSQ13938 189 aa16.61■□□□□ 0.25
RPUSD3-215ENST00000475470 TAS1R2Q8TE23 839 aa16.61■□□□□ 0.25
RPUSD3-215ENST00000475470 PSPC1Q8WXF1 523 aaKnown RBP16.61■□□□□ 0.25
RPUSD3-215ENST00000475470 COPS5Q92905 334 aa16.61■□□□□ 0.25
RPUSD3-215ENST00000475470 NT5C1BQ96P26 610 aa16.61■□□□□ 0.25
RPUSD3-215ENST00000475470 TMEM134Q9H6X4 195 aa16.61■□□□□ 0.25
RPUSD3-215ENST00000475470 SUGCTQ9HAC7 445 aa16.61■□□□□ 0.25
RPUSD3-215ENST00000475470 RNF216Q9NWF9 866 aaPredicted RBP16.61■□□□□ 0.25
RPUSD3-215ENST00000475470 CCL15-CCL14A0A0B4J2E2 113 aa16.6■□□□□ 0.25
RPUSD3-215ENST00000475470 ERLIN1O75477 346 aa16.6■□□□□ 0.25
RPUSD3-215ENST00000475470 DNA2P51530 1060 aa16.6■□□□□ 0.25
RPUSD3-215ENST00000475470 CCL15Q16663 113 aa16.6■□□□□ 0.25
RPUSD3-215ENST00000475470 IER5Q5VY09 327 aa16.6■□□□□ 0.25
RPUSD3-215ENST00000475470 ATP8B4Q8TF62 1192 aa16.6■□□□□ 0.25
RPUSD3-215ENST00000475470 LMBR1Q8WVP7 490 aa16.6■□□□□ 0.25
RPUSD3-215ENST00000475470 PRPF31Q8WWY3 499 aaKnown RBP16.6■□□□□ 0.25
RPUSD3-215ENST00000475470 FNBP1Q96RU3 617 aa16.6■□□□□ 0.25
RPUSD3-215ENST00000475470 TARS2Q9BW92 718 aaKnown RBP16.6■□□□□ 0.25
RPUSD3-215ENST00000475470 MCM3APO60318 1980 aa16.6■□□□□ 0.25
RPUSD3-215ENST00000475470 ADCY3O60266 1144 aa16.6■□□□□ 0.25
RPUSD3-215ENST00000475470 ACOT2P49753 483 aa16.6■□□□□ 0.25
RPUSD3-215ENST00000475470 DRP2Q13474 957 aa16.6■□□□□ 0.25
RPUSD3-215ENST00000475470 ZNF572Q7Z3I7 529 aaPredicted RBP16.6■□□□□ 0.25
RPUSD3-215ENST00000475470 EXOC8Q8IYI6 725 aa16.6■□□□□ 0.25
RPUSD3-215ENST00000475470 TCP11Q8WWU5 503 aa16.6■□□□□ 0.25
RPUSD3-215ENST00000475470 CTNNBL1Q8WYA6 563 aaPredicted RBP16.6■□□□□ 0.25
RPUSD3-215ENST00000475470 MS4A4AQ96JQ5 239 aa16.6■□□□□ 0.25
RPUSD3-215ENST00000475470 KREMEN1Q96MU8 473 aa16.6■□□□□ 0.25
RPUSD3-215ENST00000475470 PDGFCQ9NRA1 345 aa16.6■□□□□ 0.25
RPUSD3-215ENST00000475470 ANKFY1Q9P2R3 1169 aa16.6■□□□□ 0.25
RPUSD3-215ENST00000475470 RNF14Q9UBS8 474 aa16.6■□□□□ 0.25
RPUSD3-215ENST00000475470 PACSIN2Q9UNF0 486 aaPredicted RBP16.6■□□□□ 0.25
RPUSD3-215ENST00000475470 BTBD19C9JJ37 291 aa16.59■□□□□ 0.25
RPUSD3-215ENST00000475470 LDHAP00338 332 aaKnown RBP16.59■□□□□ 0.25
RPUSD3-215ENST00000475470 TMEM253P0C7T8 217 aa16.59■□□□□ 0.25
RPUSD3-215ENST00000475470 NLRP11P59045 1033 aaKnown RBP16.59■□□□□ 0.25
RPUSD3-215ENST00000475470 VSNL1P62760 191 aa16.59■□□□□ 0.25
RPUSD3-215ENST00000475470 PSMD6Q15008 389 aa16.59■□□□□ 0.25
RPUSD3-215ENST00000475470 CFAP221Q4G0U5 840 aa16.59■□□□□ 0.25
RPUSD3-215ENST00000475470 CCDC70Q6NSX1 233 aa16.59■□□□□ 0.25
RPUSD3-215ENST00000475470 ARMCX2Q7L311 632 aa16.59■□□□□ 0.25
RPUSD3-215ENST00000475470 FAM71AQ8IYT1 594 aa16.59■□□□□ 0.25
RPUSD3-215ENST00000475470 TPCN2Q8NHX9 752 aa16.59■□□□□ 0.25
RPUSD3-215ENST00000475470 SCFD2Q8WU76 684 aa16.59■□□□□ 0.25
RPUSD3-215ENST00000475470 SLC20A1Q8WUM9 679 aa16.59■□□□□ 0.25
RPUSD3-215ENST00000475470 HNRNPLLQ8WVV9 542 aaKnown RBP16.59■□□□□ 0.25
RPUSD3-215ENST00000475470 ZBTB45Q96K62 511 aaPredicted RBP16.59■□□□□ 0.25
RPUSD3-215ENST00000475470 MSTO1Q9BUK6 570 aa16.59■□□□□ 0.25
RPUSD3-215ENST00000475470 SMARCAD1Q9H4L7 1026 aa16.59■□□□□ 0.25
RPUSD3-215ENST00000475470 SLC45A1Q9Y2W3 748 aa16.59■□□□□ 0.25
RPUSD3-215ENST00000475470 ATP8B1O43520 1251 aa16.59■□□□□ 0.25
RPUSD3-215ENST00000475470 GAS2O43903 313 aaKnown RBP16.59■□□□□ 0.25
RPUSD3-215ENST00000475470 TNNI1P19237 187 aa16.59■□□□□ 0.25
RPUSD3-215ENST00000475470 ABCB4P21439 1286 aa16.59■□□□□ 0.25
RPUSD3-215ENST00000475470 ITIH3Q06033 890 aa16.59■□□□□ 0.25
RPUSD3-215ENST00000475470 PLCB4Q15147 1175 aa16.59■□□□□ 0.25
RPUSD3-215ENST00000475470 SPATA4Q8NEY3 305 aa16.59■□□□□ 0.25
RPUSD3-215ENST00000475470 HELQQ8TDG4 1101 aa16.59■□□□□ 0.25
RPUSD3-215ENST00000475470 TAF4BQ92750 862 aa16.59■□□□□ 0.25
RPUSD3-215ENST00000475470 ADORA2AP29274 412 aa16.58■□□□□ 0.25
RPUSD3-215ENST00000475470 SLC26A2P50443 739 aa16.58■□□□□ 0.25
RPUSD3-215ENST00000475470 EFNA5P52803 228 aa16.58■□□□□ 0.25
RPUSD3-215ENST00000475470 PRPF4BQ13523 1007 aaKnown RBP16.58■□□□□ 0.25
RPUSD3-215ENST00000475470 RPS6KA1Q15418 735 aa16.58■□□□□ 0.25
RPUSD3-215ENST00000475470 LONRF2Q1L5Z9 754 aa16.58■□□□□ 0.25
RPUSD3-215ENST00000475470 TMEM63BQ5T3F8 832 aa16.58■□□□□ 0.25
RPUSD3-215ENST00000475470 WDR93Q6P2C0 686 aa16.58■□□□□ 0.25
RPUSD3-215ENST00000475470 RPUSD2Q8IZ73 545 aaKnown RBP16.58■□□□□ 0.25
RPUSD3-215ENST00000475470 KRT222Q8N1A0 295 aa16.58■□□□□ 0.25
RPUSD3-215ENST00000475470 LRRC57Q8N9N7 239 aa16.58■□□□□ 0.25
RPUSD3-215ENST00000475470 SHC3Q92529 594 aa16.58■□□□□ 0.25
RPUSD3-215ENST00000475470 HAPLN2Q9GZV7 340 aa16.58■□□□□ 0.25
RPUSD3-215ENST00000475470 EHD2Q9NZN4 543 aa16.58■□□□□ 0.25
RPUSD3-215ENST00000475470 TRPC6Q9Y210 931 aa16.58■□□□□ 0.25
RPUSD3-215ENST00000475470 SGPL1O95470 568 aa16.58■□□□□ 0.24
RPUSD3-215ENST00000475470 SRGAP2CP0DJJ0 459 aa16.58■□□□□ 0.24
RPUSD3-215ENST00000475470 MCM3P25205 808 aa16.58■□□□□ 0.24
RPUSD3-215ENST00000475470 MXD4Q14582 209 aaPredicted RBP16.58■□□□□ 0.24
RPUSD3-215ENST00000475470 PALB2Q86YC2 1186 aa16.58■□□□□ 0.24
RPUSD3-215ENST00000475470 SYCE1Q8N0S2 351 aa16.58■□□□□ 0.24
RPUSD3-215ENST00000475470 LRRC71Q8N4P6 559 aa16.58■□□□□ 0.24
RPUSD3-215ENST00000475470 MMGT1Q8N4V1 131 aa16.58■□□□□ 0.24
RPUSD3-215ENST00000475470 ZNF516Q92618 1163 aa16.58■□□□□ 0.24
RPUSD3-215ENST00000475470 MS4A14Q96JA4 679 aa16.58■□□□□ 0.24
RPUSD3-215ENST00000475470 TAS2R14Q9NYV8 317 aa16.58■□□□□ 0.24
RPUSD3-215ENST00000475470 RBAKQ9NYW8 714 aaPredicted RBP16.58■□□□□ 0.24
RPUSD3-215ENST00000475470 SMARCAL1Q9NZC9 954 aa16.58■□□□□ 0.24
RPUSD3-215ENST00000475470 SIP14410 1827 aa16.58■□□□□ 0.24
RPUSD3-215ENST00000475470 A0A0B4J269 797 aa16.57■□□□□ 0.24
RPUSD3-215ENST00000475470 TARSL2A2RTX5 802 aaKnown RBP16.57■□□□□ 0.24
RPUSD3-215ENST00000475470 ANKRD62A6NC57 917 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms