RNA–Protein interactions for RNA: ENST00000475375.1

VPS36-203, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-203ENST00000475375 KCNMB3Q9NPA1 279 aa22.79■■□□□ 1.24
VPS36-203ENST00000475375 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP22.79■■□□□ 1.24
VPS36-203ENST00000475375 MIOSQ9NXC5 875 aa22.79■■□□□ 1.24
VPS36-203ENST00000475375 ZDHHC7Q9NXF8 308 aa22.79■■□□□ 1.24
VPS36-203ENST00000475375 RGL1Q9NZL6 768 aa22.79■■□□□ 1.24
VPS36-203ENST00000475375 CACNA1AO00555 2505 aa22.79■■□□□ 1.24
VPS36-203ENST00000475375 RPL17P18621 184 aaKnown RBP22.78■■□□□ 1.24
VPS36-203ENST00000475375 STK3Q13188 491 aa22.78■■□□□ 1.24
VPS36-203ENST00000475375 TFDP1Q14186 410 aa22.78■■□□□ 1.24
VPS36-203ENST00000475375 MXD4Q14582 209 aaPredicted RBP22.78■■□□□ 1.24
VPS36-203ENST00000475375 EPHA7Q15375 998 aa22.78■■□□□ 1.24
VPS36-203ENST00000475375 NPY5RQ15761 445 aa22.78■■□□□ 1.24
VPS36-203ENST00000475375 USP41Q3LFD5 358 aa22.78■■□□□ 1.24
VPS36-203ENST00000475375 FUT10Q6P4F1 479 aa22.78■■□□□ 1.24
VPS36-203ENST00000475375 DCLRE1AQ6PJP8 1040 aa22.78■■□□□ 1.24
VPS36-203ENST00000475375 CENPQQ7L2Z9 268 aaPredicted RBP22.78■■□□□ 1.24
VPS36-203ENST00000475375 NEK8Q86SG6 692 aa22.78■■□□□ 1.24
VPS36-203ENST00000475375 DYDC2Q96IM9 177 aa22.78■■□□□ 1.24
VPS36-203ENST00000475375 LARP6Q9BRS8 491 aaKnown RBP22.78■■□□□ 1.24
VPS36-203ENST00000475375 PRKD2Q9BZL6 878 aa22.78■■□□□ 1.24
VPS36-203ENST00000475375 CSRNP2Q9H175 543 aa22.78■■□□□ 1.24
VPS36-203ENST00000475375 KCNJ14Q9UNX9 436 aa22.78■■□□□ 1.24
VPS36-203ENST00000475375 ZBTB39O15060 712 aa22.77■■□□□ 1.24
VPS36-203ENST00000475375 CCNT1O60563 726 aaKnown RBP22.77■■□□□ 1.24
VPS36-203ENST00000475375 EFEMP2O95967 443 aa22.77■■□□□ 1.24
VPS36-203ENST00000475375 GCFC2P16383 781 aaKnown RBP22.77■■□□□ 1.24
VPS36-203ENST00000475375 PTENP60484 403 aa22.77■■□□□ 1.24
VPS36-203ENST00000475375 CYP4A11Q02928 519 aa22.77■■□□□ 1.24
VPS36-203ENST00000475375 CREMQ03060 361 aa22.77■■□□□ 1.24
VPS36-203ENST00000475375 HTR4Q13639 388 aa22.77■■□□□ 1.24
VPS36-203ENST00000475375 TOB2Q14106 344 aaPredicted RBP22.77■■□□□ 1.24
VPS36-203ENST00000475375 CTTNQ14247 550 aaKnown RBP22.77■■□□□ 1.24
VPS36-203ENST00000475375 PCBP1Q15365 356 aaKnown RBP eCLIP22.77■■□□□ 1.24
VPS36-203ENST00000475375 PHLDB3Q6NSJ2 640 aa22.77■■□□□ 1.24
VPS36-203ENST00000475375 DGLUCYQ7Z3D6 616 aa22.77■■□□□ 1.24
VPS36-203ENST00000475375 C1orf210Q8IVY1 113 aa22.77■■□□□ 1.24
VPS36-203ENST00000475375 RABGGTAQ92696 567 aa22.77■■□□□ 1.24
VPS36-203ENST00000475375 GPR62Q9BZJ7 368 aa22.77■■□□□ 1.24
VPS36-203ENST00000475375 NXF3Q9H4D5 531 aaKnown RBP22.77■■□□□ 1.24
VPS36-203ENST00000475375 ZSWIM4Q9H7M6 989 aa22.77■■□□□ 1.24
VPS36-203ENST00000475375 CHST7Q9NS84 486 aa22.77■■□□□ 1.24
VPS36-203ENST00000475375 GIT1Q9Y2X7 761 aa22.77■■□□□ 1.24
VPS36-203ENST00000475375 NUMBLQ9Y6R0 609 aa22.77■■□□□ 1.24
VPS36-203ENST00000475375 SP9P0CG40 484 aa22.76■■□□□ 1.23
VPS36-203ENST00000475375 AKAP5P24588 427 aa22.76■■□□□ 1.23
VPS36-203ENST00000475375 RUFY3Q7L099 469 aa22.76■■□□□ 1.23
VPS36-203ENST00000475375 TPH2Q8IWU9 490 aa22.76■■□□□ 1.23
VPS36-203ENST00000475375 FAM177A1Q8N128 213 aaPredicted RBP22.76■■□□□ 1.23
VPS36-203ENST00000475375 FOXQ1Q9C009 403 aa22.76■■□□□ 1.23
VPS36-203ENST00000475375 ADAM28Q9UKQ2 775 aa22.76■■□□□ 1.23
VPS36-203ENST00000475375 ANHXE9PGG2 379 aa22.75■■□□□ 1.23
VPS36-203ENST00000475375 TADA2AO75478 443 aa22.75■■□□□ 1.23
VPS36-203ENST00000475375 FSHRP23945 695 aa22.75■■□□□ 1.23
VPS36-203ENST00000475375 PPP4R3AQ6IN85 833 aa22.75■■□□□ 1.23
VPS36-203ENST00000475375 CCDC43Q96MW1 224 aaKnown RBP22.75■■□□□ 1.23
VPS36-203ENST00000475375 SLC2A4RGQ9NR83 387 aa22.75■■□□□ 1.23
VPS36-203ENST00000475375 KLK14Q9P0G3 267 aa22.75■■□□□ 1.23
VPS36-203ENST00000475375 FNIP2Q9P278 1114 aa22.75■■□□□ 1.23
VPS36-203ENST00000475375 PARP2Q9UGN5 583 aa22.75■■□□□ 1.23
VPS36-203ENST00000475375 DOCK8Q8NF50 2099 aa22.74■■□□□ 1.23
VPS36-203ENST00000475375 TBX3O15119 743 aa22.74■■□□□ 1.23
VPS36-203ENST00000475375 ZMYND10O75800 440 aa22.74■■□□□ 1.23
VPS36-203ENST00000475375 REC8O95072 547 aa22.74■■□□□ 1.23
VPS36-203ENST00000475375 NPTXRO95502 500 aa22.74■■□□□ 1.23
VPS36-203ENST00000475375 C1RP00736 705 aa22.74■■□□□ 1.23
VPS36-203ENST00000475375 ARF4P18085 180 aaPredicted RBP22.74■■□□□ 1.23
VPS36-203ENST00000475375 PRSS55Q6UWB4 352 aaPredicted RBP22.74■■□□□ 1.23
VPS36-203ENST00000475375 PIK3AP1Q6ZUJ8 805 aa22.74■■□□□ 1.23
VPS36-203ENST00000475375 PJA1Q8NG27 643 aa22.74■■□□□ 1.23
VPS36-203ENST00000475375 HAS1Q92839 578 aa22.74■■□□□ 1.23
VPS36-203ENST00000475375 ZNF274Q96GC6 653 aaPredicted RBP22.74■■□□□ 1.23
VPS36-203ENST00000475375 SHDQ96IW2 340 aa22.74■■□□□ 1.23
VPS36-203ENST00000475375 NAP1L4Q99733 375 aaKnown RBP22.74■■□□□ 1.23
VPS36-203ENST00000475375 DLGAP2Q9P1A6 1054 aa22.74■■□□□ 1.23
VPS36-203ENST00000475375 CYP46A1Q9Y6A2 500 aa22.74■■□□□ 1.23
VPS36-203ENST00000475375 BAG4O95429 457 aaKnown RBP22.73■■□□□ 1.23
VPS36-203ENST00000475375 MBTD1Q05BQ5 628 aa22.73■■□□□ 1.23
VPS36-203ENST00000475375 GRIK3Q13003 919 aa22.73■■□□□ 1.23
VPS36-203ENST00000475375 LILRA6Q6PI73 481 aa22.73■■□□□ 1.23
VPS36-203ENST00000475375 GRASPQ7Z6J2 395 aaPredicted RBP22.73■■□□□ 1.23
VPS36-203ENST00000475375 CDR2LQ86X02 465 aaPredicted RBP22.73■■□□□ 1.23
VPS36-203ENST00000475375 POTEDQ86YR6 584 aa22.73■■□□□ 1.23
VPS36-203ENST00000475375 HASPINQ8TF76 798 aa22.73■■□□□ 1.23
VPS36-203ENST00000475375 RUBCNQ92622 972 aa22.73■■□□□ 1.23
VPS36-203ENST00000475375 XPNPEP1Q9NQW7 623 aa22.73■■□□□ 1.23
VPS36-203ENST00000475375 ZFP37Q9Y6Q3 630 aaPredicted RBP22.73■■□□□ 1.23
VPS36-203ENST00000475375 TDRD15B5MCY1 1934 aaKnown RBP22.72■■□□□ 1.23
VPS36-203ENST00000475375 MED19A0JLT2 244 aaPredicted RBP22.72■■□□□ 1.23
VPS36-203ENST00000475375 B4GALT5O43286 388 aa22.72■■□□□ 1.23
VPS36-203ENST00000475375 PAPLNO95428 1278 aa22.72■■□□□ 1.23
VPS36-203ENST00000475375 XBP1P17861 261 aa22.72■■□□□ 1.23
VPS36-203ENST00000475375 GPC5P78333 572 aa22.72■■□□□ 1.23
VPS36-203ENST00000475375 CAPSQ13938 189 aa22.72■■□□□ 1.23
VPS36-203ENST00000475375 LIN9Q5TKA1 542 aa22.72■■□□□ 1.23
VPS36-203ENST00000475375 POTEGQ6S5H5 508 aa22.72■■□□□ 1.23
VPS36-203ENST00000475375 GPR65Q8IYL9 337 aa22.72■■□□□ 1.23
VPS36-203ENST00000475375 ASAP3Q8TDY4 903 aa22.72■■□□□ 1.23
VPS36-203ENST00000475375 RPP25Q9BUL9 199 aaKnown RBP22.72■■□□□ 1.23
VPS36-203ENST00000475375 PHF20Q9BVI0 1012 aa22.72■■□□□ 1.23
VPS36-203ENST00000475375 ZSWIM6Q9HCJ5 1215 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms