RNA–Protein interactions for RNA: ENST00000474644.1

COL1A1-204, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-204ENST00000474644 CLLU1OSQ5K130 101 aa17.25■□□□□ 0.35
COL1A1-204ENST00000474644 APBB1IPQ7Z5R6 666 aaPredicted RBP17.25■□□□□ 0.35
COL1A1-204ENST00000474644 ZBTB33Q86T24 672 aa17.25■□□□□ 0.35
COL1A1-204ENST00000474644 KIAA0895Q8NCT3 520 aa17.25■□□□□ 0.35
COL1A1-204ENST00000474644 CCDC47Q96A33 483 aaKnown RBP17.25■□□□□ 0.35
COL1A1-204ENST00000474644 PGBD4Q96DM1 585 aa17.25■□□□□ 0.35
COL1A1-204ENST00000474644 ZBTB45Q96K62 511 aaPredicted RBP17.25■□□□□ 0.35
COL1A1-204ENST00000474644 RNF39Q9H2S5 420 aa17.25■□□□□ 0.35
COL1A1-204ENST00000474644 NKX2-4Q9H2Z4 354 aa17.25■□□□□ 0.35
COL1A1-204ENST00000474644 MSRAQ9UJ68 235 aa17.25■□□□□ 0.35
COL1A1-204ENST00000474644 EXOC7Q9UPT5 735 aa17.25■□□□□ 0.35
COL1A1-204ENST00000474644 UBE4BO95155 1302 aa17.24■□□□□ 0.35
COL1A1-204ENST00000474644 ARHGEF15O94989 841 aa17.24■□□□□ 0.35
COL1A1-204ENST00000474644 SMC2O95347 1197 aa17.24■□□□□ 0.35
COL1A1-204ENST00000474644 HARSP12081 509 aaKnown RBP17.24■□□□□ 0.35
COL1A1-204ENST00000474644 ITGA4P13612 1032 aa17.24■□□□□ 0.35
COL1A1-204ENST00000474644 MCL1Q07820 350 aa17.24■□□□□ 0.35
COL1A1-204ENST00000474644 PSMD2Q13200 908 aa17.24■□□□□ 0.35
COL1A1-204ENST00000474644 NOLC1Q14978 699 aaKnown RBP eCLIP17.24■□□□□ 0.35
COL1A1-204ENST00000474644 AGMOQ6ZNB7 445 aa17.24■□□□□ 0.35
COL1A1-204ENST00000474644 HACE1Q8IYU2 909 aa17.24■□□□□ 0.35
COL1A1-204ENST00000474644 SPATA20Q8TB22 786 aa17.24■□□□□ 0.35
COL1A1-204ENST00000474644 HELQQ8TDG4 1101 aa17.24■□□□□ 0.35
COL1A1-204ENST00000474644 SCFD1Q8WVM8 642 aa17.24■□□□□ 0.35
COL1A1-204ENST00000474644 LRCH3Q96II8 777 aa17.24■□□□□ 0.35
COL1A1-204ENST00000474644 TCHPQ9BT92 498 aa17.24■□□□□ 0.35
COL1A1-204ENST00000474644 APOL6Q9BWW8 343 aa17.24■□□□□ 0.35
COL1A1-204ENST00000474644 HAPLN2Q9GZV7 340 aa17.24■□□□□ 0.35
COL1A1-204ENST00000474644 TMEM117Q9H0C3 514 aa17.24■□□□□ 0.35
COL1A1-204ENST00000474644 PCDHA5Q9Y5H7 936 aa17.24■□□□□ 0.35
COL1A1-204ENST00000474644 GBF1Q92538 1859 aa17.24■□□□□ 0.35
COL1A1-204ENST00000474644 LAMA2P24043 3122 aaKnown RBP17.23■□□□□ 0.35
COL1A1-204ENST00000474644 TBKBP1A7MCY6 615 aa17.23■□□□□ 0.35
COL1A1-204ENST00000474644 ANKRD63C9JTQ0 380 aa17.23■□□□□ 0.35
COL1A1-204ENST00000474644 CLDN3O15551 220 aa17.23■□□□□ 0.35
COL1A1-204ENST00000474644 AKAP5P24588 427 aa17.23■□□□□ 0.35
COL1A1-204ENST00000474644 HOXD13P35453 343 aa17.23■□□□□ 0.35
COL1A1-204ENST00000474644 BTG3Q14201 252 aaPredicted RBP17.23■□□□□ 0.35
COL1A1-204ENST00000474644 BMT2Q1RMZ1 405 aa17.23■□□□□ 0.35
COL1A1-204ENST00000474644 PAN2Q504Q3 1202 aaKnown RBP17.23■□□□□ 0.35
COL1A1-204ENST00000474644 CMTR2Q8IYT2 770 aaKnown RBP17.23■□□□□ 0.35
COL1A1-204ENST00000474644 ABI1Q8IZP0 508 aa17.23■□□□□ 0.35
COL1A1-204ENST00000474644 SYCP3Q8IZU3 236 aa17.23■□□□□ 0.35
COL1A1-204ENST00000474644 CEP120Q8N960 986 aa17.23■□□□□ 0.35
COL1A1-204ENST00000474644 ZNF507Q8TCN5 953 aa17.23■□□□□ 0.35
COL1A1-204ENST00000474644 GPT2Q8TD30 523 aa17.23■□□□□ 0.35
COL1A1-204ENST00000474644 SMARCE1Q969G3 411 aa17.23■□□□□ 0.35
COL1A1-204ENST00000474644 TIFAQ96CG3 184 aa17.23■□□□□ 0.35
COL1A1-204ENST00000474644 CASD1Q96PB1 797 aa17.23■□□□□ 0.35
COL1A1-204ENST00000474644 CLSTN2Q9H4D0 955 aa17.23■□□□□ 0.35
COL1A1-204ENST00000474644 TMEM206Q9H813 350 aa17.23■□□□□ 0.35
COL1A1-204ENST00000474644 RSAD1Q9HA92 442 aa17.23■□□□□ 0.35
COL1A1-204ENST00000474644 RMND1Q9NWS8 449 aa17.23■□□□□ 0.35
COL1A1-204ENST00000474644 SNTG2Q9NY99 539 aa17.23■□□□□ 0.35
COL1A1-204ENST00000474644 LINC01553A4QN01 128 aa17.22■□□□□ 0.35
COL1A1-204ENST00000474644 MCM4P33991 863 aa17.22■□□□□ 0.35
COL1A1-204ENST00000474644 MLH1P40692 756 aa17.22■□□□□ 0.35
COL1A1-204ENST00000474644 GRM5P41594 1212 aa17.22■□□□□ 0.35
COL1A1-204ENST00000474644 MATR3P43243 847 aaKnown RBP eCLIP17.22■□□□□ 0.35
COL1A1-204ENST00000474644 CAMK4Q16566 473 aa17.22■□□□□ 0.35
COL1A1-204ENST00000474644 GLB1LQ6UWU2 654 aa17.22■□□□□ 0.35
COL1A1-204ENST00000474644 GSDMAQ96QA5 445 aa17.22■□□□□ 0.35
COL1A1-204ENST00000474644 UBN1Q9NPG3 1134 aa17.22■□□□□ 0.35
COL1A1-204ENST00000474644 GDAQ9Y2T3 454 aa17.22■□□□□ 0.35
COL1A1-204ENST00000474644 STYXL1Q9Y6J8 313 aa17.22■□□□□ 0.35
COL1A1-204ENST00000474644 A0A0B4J269 797 aa17.21■□□□□ 0.35
COL1A1-204ENST00000474644 INPPL1O15357 1258 aa17.21■□□□□ 0.35
COL1A1-204ENST00000474644 FAM189A1O60320 539 aa17.21■□□□□ 0.35
COL1A1-204ENST00000474644 OFD1O75665 1012 aa17.21■□□□□ 0.35
COL1A1-204ENST00000474644 RECQL4O94761 1208 aa17.21■□□□□ 0.35
COL1A1-204ENST00000474644 ADSSP30520 456 aa17.21■□□□□ 0.35
COL1A1-204ENST00000474644 OSTNP61366 133 aa17.21■□□□□ 0.35
COL1A1-204ENST00000474644 PPP2R2DQ66LE6 453 aa17.21■□□□□ 0.35
COL1A1-204ENST00000474644 NELFCDQ8IXH7 590 aa17.21■□□□□ 0.35
COL1A1-204ENST00000474644 TMEM192Q8IY95 271 aa17.21■□□□□ 0.35
COL1A1-204ENST00000474644 THNSL1Q8IYQ7 743 aa17.21■□□□□ 0.35
COL1A1-204ENST00000474644 LRRC43Q8N309 656 aa17.21■□□□□ 0.35
COL1A1-204ENST00000474644 FIBCD1Q8N539 461 aa17.21■□□□□ 0.35
COL1A1-204ENST00000474644 RSPH1Q8WYR4 309 aa17.21■□□□□ 0.35
COL1A1-204ENST00000474644 MSTO1Q9BUK6 570 aa17.21■□□□□ 0.35
COL1A1-204ENST00000474644 CCDC94Q9BW85 323 aaPredicted RBP17.21■□□□□ 0.35
COL1A1-204ENST00000474644 SLC28A3Q9HAS3 691 aa17.21■□□□□ 0.35
COL1A1-204ENST00000474644 HCSTQ9UBK5 93 aa17.21■□□□□ 0.35
COL1A1-204ENST00000474644 PARP2Q9UGN5 583 aa17.21■□□□□ 0.35
COL1A1-204ENST00000474644 INPP5FQ9Y2H2 1132 aa17.21■□□□□ 0.35
COL1A1-204ENST00000474644 GIT1Q9Y2X7 761 aa17.21■□□□□ 0.35
COL1A1-204ENST00000474644 MRPL42Q9Y6G3 142 aaKnown RBP17.21■□□□□ 0.35
COL1A1-204ENST00000474644 ARL5CA6NH57 179 aa17.2■□□□□ 0.34
COL1A1-204ENST00000474644 LINC00271P0C7V0 271 aa17.2■□□□□ 0.34
COL1A1-204ENST00000474644 AFF1P51825 1210 aaKnown RBP17.2■□□□□ 0.34
COL1A1-204ENST00000474644 TAP1Q03518 808 aa17.2■□□□□ 0.34
COL1A1-204ENST00000474644 SEZ6Q53EL9 994 aa17.2■□□□□ 0.34
COL1A1-204ENST00000474644 NOMO2Q5JPE7 1267 aa17.2■□□□□ 0.34
COL1A1-204ENST00000474644 SLFN12LQ6IEE8 588 aa17.2■□□□□ 0.34
COL1A1-204ENST00000474644 SPRED2Q7Z698 418 aa17.2■□□□□ 0.34
COL1A1-204ENST00000474644 SMYD4Q8IYR2 804 aaPredicted RBP17.2■□□□□ 0.34
COL1A1-204ENST00000474644 ZFP42Q96MM3 310 aa17.2■□□□□ 0.34
COL1A1-204ENST00000474644 GAD1Q99259 594 aa17.2■□□□□ 0.34
COL1A1-204ENST00000474644 MRPL9Q9BYD2 267 aaKnown RBP17.2■□□□□ 0.34
COL1A1-204ENST00000474644 GBP3Q9H0R5 595 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms