RNA–Protein interactions for RNA: ENST00000474272.1

TMEM50B-208, Transcript of transmembrane protein 50B, human

TSL 3

Gene TMEM50B, Length 518 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMEM50B-208	ENST00000474272	FOXI1	Q12951	378 aa		5.08	□□□□□ -1.6
TMEM50B-208	ENST00000474272	LRRC32	Q14392	662 aa		5.08	□□□□□ -1.6
TMEM50B-208	ENST00000474272	BEAN1	Q3B7T3	259 aa		5.08	□□□□□ -1.6
TMEM50B-208	ENST00000474272	PDCD4	Q53EL6	469 aa	Known RBP	5.08	□□□□□ -1.6
TMEM50B-208	ENST00000474272	METTL24	Q5JXM2	366 aa		5.08	□□□□□ -1.6
TMEM50B-208	ENST00000474272	ZKSCAN2	Q63HK3	967 aa		5.08	□□□□□ -1.6
TMEM50B-208	ENST00000474272	BTNL9	Q6UXG8	535 aa		5.08	□□□□□ -1.6
TMEM50B-208	ENST00000474272	DOK3	Q7L591	496 aa		5.08	□□□□□ -1.6
TMEM50B-208	ENST00000474272	ARHGEF19	Q8IW93	802 aa		5.08	□□□□□ -1.6
TMEM50B-208	ENST00000474272	CPEB3	Q8NE35	698 aa	Known RBP	5.08	□□□□□ -1.6
TMEM50B-208	ENST00000474272	OR10H5	Q8NGA6	315 aa		5.08	□□□□□ -1.6
TMEM50B-208	ENST00000474272	CAVIN3	Q969G5	261 aa		5.08	□□□□□ -1.6
TMEM50B-208	ENST00000474272	GPR101	Q96P66	508 aa	Predicted RBP	5.08	□□□□□ -1.6
TMEM50B-208	ENST00000474272	DCLRE1C	Q96SD1	692 aa	Known RBP	5.08	□□□□□ -1.6
TMEM50B-208	ENST00000474272	SLK	Q9H2G2	1235 aa	Predicted RBP	5.08	□□□□□ -1.6
TMEM50B-208	ENST00000474272	SYBU	Q9NX95	663 aa		5.08	□□□□□ -1.6
TMEM50B-208	ENST00000474272	POGK	Q9P215	609 aa		5.08	□□□□□ -1.6
TMEM50B-208	ENST00000474272	SPATA31A6	Q5VVP1	1343 aa		5.07	□□□□□ -1.6
TMEM50B-208	ENST00000474272	ANKRD62	A6NC57	917 aa		5.07	□□□□□ -1.6
TMEM50B-208	ENST00000474272	ZSCAN20	P17040	1043 aa	Predicted RBP	5.07	□□□□□ -1.6
TMEM50B-208	ENST00000474272	WNT3A	P56704	352 aa		5.07	□□□□□ -1.6
TMEM50B-208	ENST00000474272	PPARA	Q07869	468 aa		5.07	□□□□□ -1.6
TMEM50B-208	ENST00000474272	TP53BP2	Q13625	1128 aa		5.07	□□□□□ -1.6
TMEM50B-208	ENST00000474272	PCBP1	Q15365	356 aa	Known RBP eCLIP	5.07	□□□□□ -1.6
TMEM50B-208	ENST00000474272	COLEC12	Q5KU26	742 aa		5.07	□□□□□ -1.6
TMEM50B-208	ENST00000474272	CNNM4	Q6P4Q7	775 aa		5.07	□□□□□ -1.6
TMEM50B-208	ENST00000474272	LMBR1L	Q6UX01	489 aa		5.07	□□□□□ -1.6
TMEM50B-208	ENST00000474272	ABHD15	Q6UXT9	468 aa		5.07	□□□□□ -1.6
TMEM50B-208	ENST00000474272	RD3	Q7Z3Z2	195 aa		5.07	□□□□□ -1.6
TMEM50B-208	ENST00000474272	LYSMD2	Q8IV50	215 aa		5.07	□□□□□ -1.6
TMEM50B-208	ENST00000474272	DHX37	Q8IY37	1157 aa	Known RBP	5.07	□□□□□ -1.6
TMEM50B-208	ENST00000474272	EFHB	Q8N7U6	833 aa		5.07	□□□□□ -1.6
TMEM50B-208	ENST00000474272	MFSD3	Q96ES6	412 aa		5.07	□□□□□ -1.6
TMEM50B-208	ENST00000474272	MAGEC2	Q9UBF1	373 aa	Predicted RBP	5.07	□□□□□ -1.6
TMEM50B-208	ENST00000474272	DKK2	Q9UBU2	259 aa		5.07	□□□□□ -1.6
TMEM50B-208	ENST00000474272	EVL	Q9UI08	416 aa	Predicted RBP	5.07	□□□□□ -1.6
TMEM50B-208	ENST00000474272	TMPRSS11E	Q9UL52	423 aa		5.07	□□□□□ -1.6
TMEM50B-208	ENST00000474272	PRAMEF4	O60810	478 aa		5.06	□□□□□ -1.6
TMEM50B-208	ENST00000474272	XPA	P23025	273 aa	Predicted RBP	5.06	□□□□□ -1.6
TMEM50B-208	ENST00000474272	KPNA1	P52294	538 aa	Predicted RBP	5.06	□□□□□ -1.6
TMEM50B-208	ENST00000474272	SEC24C	P53992	1094 aa		5.06	□□□□□ -1.6
TMEM50B-208	ENST00000474272	TAP1	Q03518	808 aa		5.06	□□□□□ -1.6
TMEM50B-208	ENST00000474272	FBXO42	Q6P3S6	717 aa		5.06	□□□□□ -1.6
TMEM50B-208	ENST00000474272	SYCE2	Q6PIF2	218 aa		5.06	□□□□□ -1.6
TMEM50B-208	ENST00000474272	PASD1	Q8IV76	773 aa		5.06	□□□□□ -1.6
TMEM50B-208	ENST00000474272	MDM1	Q8TC05	714 aa		5.06	□□□□□ -1.6
TMEM50B-208	ENST00000474272	ASB10	Q8WXI3	467 aa		5.06	□□□□□ -1.6
TMEM50B-208	ENST00000474272	NAF1	Q96HR8	494 aa	Known RBP	5.06	□□□□□ -1.6
TMEM50B-208	ENST00000474272	ADAM2	Q99965	735 aa		5.06	□□□□□ -1.6
TMEM50B-208	ENST00000474272	SPTLC3	Q9NUV7	552 aa		5.06	□□□□□ -1.6
TMEM50B-208	ENST00000474272	USP36	Q9P275	1121 aa	Known RBP	5.06	□□□□□ -1.6
TMEM50B-208	ENST00000474272	USP15	Q9Y4E8	981 aa	Predicted RBP	5.06	□□□□□ -1.6
TMEM50B-208	ENST00000474272	PPP2R3B	Q9Y5P8	575 aa		5.06	□□□□□ -1.6
TMEM50B-208	ENST00000474272		A0A087X0B3	334 aa		5.05	□□□□□ -1.6
TMEM50B-208	ENST00000474272	TYRP1	P17643	537 aa		5.05	□□□□□ -1.6
TMEM50B-208	ENST00000474272	MASP1	P48740	699 aa		5.05	□□□□□ -1.6
TMEM50B-208	ENST00000474272	GUCY1B3	Q02153	619 aa		5.05	□□□□□ -1.6
TMEM50B-208	ENST00000474272	TRIM25	Q14258	630 aa	Known RBP	5.05	□□□□□ -1.6
TMEM50B-208	ENST00000474272	TAF7L	Q5H9L4	462 aa		5.05	□□□□□ -1.6
TMEM50B-208	ENST00000474272	THNSL2	Q86YJ6	484 aa		5.05	□□□□□ -1.6
TMEM50B-208	ENST00000474272	CEP95	Q96GE4	821 aa		5.05	□□□□□ -1.6
TMEM50B-208	ENST00000474272	PHACTR3	Q96KR7	559 aa		5.05	□□□□□ -1.6
TMEM50B-208	ENST00000474272	CDC5L	Q99459	802 aa	Known RBP	5.05	□□□□□ -1.6
TMEM50B-208	ENST00000474272	NEU1	Q99519	415 aa		5.05	□□□□□ -1.6
TMEM50B-208	ENST00000474272	ORAI3	Q9BRQ5	295 aa		5.05	□□□□□ -1.6
TMEM50B-208	ENST00000474272	EDAR	Q9UNE0	448 aa		5.05	□□□□□ -1.6
TMEM50B-208	ENST00000474272	PRKAB1	Q9Y478	270 aa		5.05	□□□□□ -1.6
TMEM50B-208	ENST00000474272	SALL3	Q9BXA9	1300 aa		5.04	□□□□□ -1.6
TMEM50B-208	ENST00000474272	GAGE12B	A1L429	117 aa		5.04	□□□□□ -1.6
TMEM50B-208	ENST00000474272	PIPSL	A2A3N6	862 aa		5.04	□□□□□ -1.6
TMEM50B-208	ENST00000474272	GAGE12H	A6NDE8	117 aa		5.04	□□□□□ -1.6
TMEM50B-208	ENST00000474272	GSG1L2	A8MUP6	293 aa		5.04	□□□□□ -1.6
TMEM50B-208	ENST00000474272	SPDEF	O95238	335 aa		5.04	□□□□□ -1.6
TMEM50B-208	ENST00000474272	DDX6	P26196	483 aa	Known RBP eCLIP	5.04	□□□□□ -1.6
TMEM50B-208	ENST00000474272	REST	Q13127	1097 aa		5.04	□□□□□ -1.6
TMEM50B-208	ENST00000474272	RNF187	Q5TA31	235 aa	Predicted RBP	5.04	□□□□□ -1.6
TMEM50B-208	ENST00000474272	SP5	Q6BEB4	398 aa	Predicted RBP	5.04	□□□□□ -1.6
TMEM50B-208	ENST00000474272	EFCAB12	Q6NXP0	572 aa		5.04	□□□□□ -1.6
TMEM50B-208	ENST00000474272	LRRTM3	Q86VH5	581 aa		5.04	□□□□□ -1.6
TMEM50B-208	ENST00000474272	KIF18B	Q86Y91	864 aa		5.04	□□□□□ -1.6
TMEM50B-208	ENST00000474272	PLXDC1	Q8IUK5	500 aa		5.04	□□□□□ -1.6
TMEM50B-208	ENST00000474272	SMC1B	Q8NDV3	1235 aa		5.04	□□□□□ -1.6
TMEM50B-208	ENST00000474272	LINC00476	Q8WZB0	136 aa		5.04	□□□□□ -1.6
TMEM50B-208	ENST00000474272	TFAP2C	Q92754	450 aa		5.04	□□□□□ -1.6
TMEM50B-208	ENST00000474272	GPATCH3	Q96I76	525 aa		5.04	□□□□□ -1.6
TMEM50B-208	ENST00000474272	TARS2	Q9BW92	718 aa	Known RBP	5.04	□□□□□ -1.6
TMEM50B-208	ENST00000474272	PRSS50	Q9UI38	385 aa		5.04	□□□□□ -1.6
TMEM50B-208	ENST00000474272	COX11	Q9Y6N1	276 aa		5.04	□□□□□ -1.6
TMEM50B-208	ENST00000474272	TBKBP1	A7MCY6	615 aa		5.03	□□□□□ -1.6
TMEM50B-208	ENST00000474272	NRP2	O60462	931 aa		5.03	□□□□□ -1.6
TMEM50B-208	ENST00000474272	PDE8A	O60658	829 aa		5.03	□□□□□ -1.6
TMEM50B-208	ENST00000474272	TMEM127	O75204	238 aa		5.03	□□□□□ -1.6
TMEM50B-208	ENST00000474272	ITGA10	O75578	1167 aa		5.03	□□□□□ -1.6
TMEM50B-208	ENST00000474272	VIL1	P09327	827 aa	Known RBP	5.03	□□□□□ -1.6
TMEM50B-208	ENST00000474272	LTA4H	P09960	611 aa	Known RBP	5.03	□□□□□ -1.6
TMEM50B-208	ENST00000474272	MYCLP1	P12525	358 aa	Predicted RBP	5.03	□□□□□ -1.6
TMEM50B-208	ENST00000474272	CD38	P28907	300 aa		5.03	□□□□□ -1.6
TMEM50B-208	ENST00000474272	CXCR5	P32302	372 aa		5.03	□□□□□ -1.6
TMEM50B-208	ENST00000474272	BMPR1A	P36894	532 aa		5.03	□□□□□ -1.6
TMEM50B-208	ENST00000474272	NRG3	P56975	720 aa		5.03	□□□□□ -1.6

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