RNA–Protein interactions for RNA: ENST00000474036.1

FN1-219, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 1,058 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-219ENST00000474036 TMEM145Q8NBT3 493 aa6.29□□□□□ -1.4
FN1-219ENST00000474036 UBXN4Q92575 508 aa6.29□□□□□ -1.4
FN1-219ENST00000474036 SNX27Q96L92 541 aa6.29□□□□□ -1.4
FN1-219ENST00000474036 MMP19Q99542 508 aa6.29□□□□□ -1.4
FN1-219ENST00000474036 LNPKQ9C0E8 428 aa6.29□□□□□ -1.4
FN1-219ENST00000474036 CCDC113Q9H0I3 377 aa6.29□□□□□ -1.4
FN1-219ENST00000474036 ARHGEF4Q9NR80 690 aa6.29□□□□□ -1.4
FN1-219ENST00000474036 SIRPGQ9P1W8 387 aa6.29□□□□□ -1.4
FN1-219ENST00000474036 PLXNB2O15031 1838 aa6.29□□□□□ -1.4
FN1-219ENST00000474036 DOCK2Q92608 1830 aa6.29□□□□□ -1.4
FN1-219ENST00000474036 XDHP47989 1333 aa6.28□□□□□ -1.4
FN1-219ENST00000474036 MYO3BQ8WXR4 1341 aa6.28□□□□□ -1.4
FN1-219ENST00000474036 MUC6Q6W4X9 2439 aa6.28□□□□□ -1.4
FN1-219ENST00000474036 DNAH12Q6ZR08 3092 aa6.28□□□□□ -1.4
FN1-219ENST00000474036 PHIPQ8WWQ0 1821 aa6.28□□□□□ -1.4
FN1-219ENST00000474036 ATAD5Q96QE3 1844 aa6.28□□□□□ -1.4
FN1-219ENST00000474036 TRBV23OR9-2A0A075B6M9 112 aa6.28□□□□□ -1.4
FN1-219ENST00000474036 FAM221BA6H8Z2 402 aa6.28□□□□□ -1.4
FN1-219ENST00000474036 NTRK1P04629 796 aa6.28□□□□□ -1.4
FN1-219ENST00000474036 CETPP11597 493 aa6.28□□□□□ -1.4
FN1-219ENST00000474036 KCNJ6P48051 423 aa6.28□□□□□ -1.4
FN1-219ENST00000474036 EIF4A1P60842 406 aaKnown RBP6.28□□□□□ -1.4
FN1-219ENST00000474036 CACNB2Q08289 660 aaPredicted RBP6.28□□□□□ -1.4
FN1-219ENST00000474036 HDAC1Q13547 482 aaPredicted RBP6.28□□□□□ -1.4
FN1-219ENST00000474036 RASGRF1Q13972 1273 aa6.28□□□□□ -1.4
FN1-219ENST00000474036 RASA3Q14644 834 aa6.28□□□□□ -1.4
FN1-219ENST00000474036 YOD1Q5VVQ6 348 aaPredicted RBP6.28□□□□□ -1.4
FN1-219ENST00000474036 TTLL5Q6EMB2 1281 aa6.28□□□□□ -1.4
FN1-219ENST00000474036 ZNF761Q86XN6 746 aaPredicted RBP6.28□□□□□ -1.4
FN1-219ENST00000474036 FAM26EQ8N5C1 309 aa6.28□□□□□ -1.4
FN1-219ENST00000474036 NETO2Q8NC67 525 aa6.28□□□□□ -1.4
FN1-219ENST00000474036 PLEKHO2Q8TD55 490 aa6.28□□□□□ -1.4
FN1-219ENST00000474036 CPA5Q8WXQ8 436 aa6.28□□□□□ -1.4
FN1-219ENST00000474036 ZBTB8AQ96BR9 441 aa6.28□□□□□ -1.4
FN1-219ENST00000474036 SGSM3Q96HU1 749 aa6.28□□□□□ -1.4
FN1-219ENST00000474036 GORASP1Q9BQQ3 440 aa6.28□□□□□ -1.4
FN1-219ENST00000474036 IER2Q9BTL4 223 aa6.28□□□□□ -1.4
FN1-219ENST00000474036 ZBTB40Q9NUA8 1239 aa6.28□□□□□ -1.4
FN1-219ENST00000474036 ZNF804BA4D1E1 1349 aa6.27□□□□□ -1.41
FN1-219ENST00000474036 CACNA1AO00555 2505 aa6.27□□□□□ -1.41
FN1-219ENST00000474036 BDP1A6H8Y1 2624 aa6.27□□□□□ -1.41
FN1-219ENST00000474036 TCP10L2B9ZVM9 353 aa6.27□□□□□ -1.41
FN1-219ENST00000474036 FUCA1P04066 466 aa6.27□□□□□ -1.41
FN1-219ENST00000474036 SF3B3Q15393 1217 aaKnown RBP6.27□□□□□ -1.41
FN1-219ENST00000474036 CFAP100Q494V2 611 aa6.27□□□□□ -1.41
FN1-219ENST00000474036 SLC35F1Q5T1Q4 408 aa6.27□□□□□ -1.41
FN1-219ENST00000474036 WWC2Q6AWC2 1192 aa6.27□□□□□ -1.41
FN1-219ENST00000474036 STK32CQ86UX6 486 aa6.27□□□□□ -1.41
FN1-219ENST00000474036 ANKRD18AQ8IVF6 992 aa6.27□□□□□ -1.41
FN1-219ENST00000474036 USP38Q8NB14 1042 aa6.27□□□□□ -1.41
FN1-219ENST00000474036 PEX11GQ96HA9 241 aa6.27□□□□□ -1.41
FN1-219ENST00000474036 RBM15Q96T37 977 aaKnown RBP eCLIP6.27□□□□□ -1.41
FN1-219ENST00000474036 API5Q9BZZ5 524 aaKnown RBP6.27□□□□□ -1.41
FN1-219ENST00000474036 C11orf49Q9H6J7 331 aa6.27□□□□□ -1.41
FN1-219ENST00000474036 PFDN2Q9UHV9 154 aa6.27□□□□□ -1.41
FN1-219ENST00000474036 PPP2R3BQ9Y5P8 575 aa6.27□□□□□ -1.41
FN1-219ENST00000474036 MED23Q9ULK4 1368 aa6.27□□□□□ -1.41
FN1-219ENST00000474036 COL2A1P02458 1487 aaPredicted RBP6.27□□□□□ -1.41
FN1-219ENST00000474036 DOCK1Q14185 1865 aa6.26□□□□□ -1.41
FN1-219ENST00000474036 K7ESM1 405 aa6.26□□□□□ -1.41
FN1-219ENST00000474036 PDHXO00330 501 aa6.26□□□□□ -1.41
FN1-219ENST00000474036 CHL1O00533 1208 aa6.26□□□□□ -1.41
FN1-219ENST00000474036 DLX3O60479 287 aa6.26□□□□□ -1.41
FN1-219ENST00000474036 CPP00450 1065 aa6.26□□□□□ -1.41
FN1-219ENST00000474036 LCP1P13796 627 aa6.26□□□□□ -1.41
FN1-219ENST00000474036 KLRK1P26718 216 aa6.26□□□□□ -1.41
FN1-219ENST00000474036 SARSP49591 514 aaKnown RBP6.26□□□□□ -1.41
FN1-219ENST00000474036 FLT3LGP49771 235 aa6.26□□□□□ -1.41
FN1-219ENST00000474036 HSP90AA2PQ14568 343 aaPredicted RBP6.26□□□□□ -1.41
FN1-219ENST00000474036 ZXDCQ2QGD7 858 aaPredicted RBP6.26□□□□□ -1.41
FN1-219ENST00000474036 MTERF2Q49AM1 385 aa6.26□□□□□ -1.41
FN1-219ENST00000474036 STRIP1Q5VSL9 837 aa6.26□□□□□ -1.41
FN1-219ENST00000474036 FAM109BQ6ICB4 259 aaPredicted RBP6.26□□□□□ -1.41
FN1-219ENST00000474036 CABP7Q86V35 215 aa6.26□□□□□ -1.41
FN1-219ENST00000474036 PPIL6Q8IXY8 311 aa6.26□□□□□ -1.41
FN1-219ENST00000474036 SMC5Q8IY18 1101 aa6.26□□□□□ -1.41
FN1-219ENST00000474036 FAM177A1Q8N128 213 aaPredicted RBP6.26□□□□□ -1.41
FN1-219ENST00000474036 LINC00482Q8N8I6 264 aa6.26□□□□□ -1.41
FN1-219ENST00000474036 ARHGAP45Q92619 1136 aa6.26□□□□□ -1.41
FN1-219ENST00000474036 CCDC140Q96MF4 163 aa6.26□□□□□ -1.41
FN1-219ENST00000474036 DEPDC7Q96QD5 511 aa6.26□□□□□ -1.41
FN1-219ENST00000474036 LBHD1Q9BQE6 289 aaPredicted RBP6.26□□□□□ -1.41
FN1-219ENST00000474036 AARSD1Q9BTE6 412 aaKnown RBP6.26□□□□□ -1.41
FN1-219ENST00000474036 SPATA9Q9BWV2 254 aa6.26□□□□□ -1.41
FN1-219ENST00000474036 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.26□□□□□ -1.41
FN1-219ENST00000474036 SNTG2Q9NY99 539 aa6.26□□□□□ -1.41
FN1-219ENST00000474036 RLFQ13129 1914 aa6.26□□□□□ -1.41
FN1-219ENST00000474036 FAM205AQ6ZU69 1335 aa6.25□□□□□ -1.41
FN1-219ENST00000474036 ADGRA2Q96PE1 1338 aa6.25□□□□□ -1.41
FN1-219ENST00000474036 TNPO2O14787 897 aaKnown RBP6.25□□□□□ -1.41
FN1-219ENST00000474036 MEFVO15553 781 aaPredicted RBP6.25□□□□□ -1.41
FN1-219ENST00000474036 PRODHO43272 600 aa6.25□□□□□ -1.41
FN1-219ENST00000474036 NPHS1O60500 1241 aa6.25□□□□□ -1.41
FN1-219ENST00000474036 CYP2C8P10632 490 aa6.25□□□□□ -1.41
FN1-219ENST00000474036 KCNJ4P48050 445 aa6.25□□□□□ -1.41
FN1-219ENST00000474036 SNAPC2Q13487 334 aa6.25□□□□□ -1.41
FN1-219ENST00000474036 PUM1Q14671 1186 aaKnown RBP eCLIP6.25□□□□□ -1.41
FN1-219ENST00000474036 TESK1Q15569 626 aa6.25□□□□□ -1.41
FN1-219ENST00000474036 CCDC152Q4G0S7 254 aa6.25□□□□□ -1.41
FN1-219ENST00000474036 ACBD5Q5T8D3 534 aaPredicted RBP6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms