RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 HTR4Q13639 388 aa5.76□□□□□ -1.49
SNRNP40-204ENST00000474025 XKR3Q5GH77 459 aa5.76□□□□□ -1.49
SNRNP40-204ENST00000474025 LRCH2Q5VUJ6 765 aa5.76□□□□□ -1.49
SNRNP40-204ENST00000474025 B3GNT9Q6UX72 402 aa5.76□□□□□ -1.49
SNRNP40-204ENST00000474025 TAS1R1Q7RTX1 841 aa5.76□□□□□ -1.49
SNRNP40-204ENST00000474025 CATSPER4Q7RTX7 472 aa5.76□□□□□ -1.49
SNRNP40-204ENST00000474025 MRPL10Q7Z7H8 261 aaKnown RBP5.76□□□□□ -1.49
SNRNP40-204ENST00000474025 RHPN2Q8IUC4 686 aa5.76□□□□□ -1.49
SNRNP40-204ENST00000474025 KSR1Q8IVT5 923 aa5.76□□□□□ -1.49
SNRNP40-204ENST00000474025 RNF168Q8IYW5 571 aaPredicted RBP5.76□□□□□ -1.49
SNRNP40-204ENST00000474025 MAML2Q8IZL2 1156 aaPredicted RBP5.76□□□□□ -1.49
SNRNP40-204ENST00000474025 DCLK2Q8N568 766 aa5.76□□□□□ -1.49
SNRNP40-204ENST00000474025 SUMF1Q8NBK3 374 aa5.76□□□□□ -1.49
SNRNP40-204ENST00000474025 PJA1Q8NG27 643 aa5.76□□□□□ -1.49
SNRNP40-204ENST00000474025 RDM1Q8NG50 284 aa5.76□□□□□ -1.49
SNRNP40-204ENST00000474025 GPR152Q8TDT2 470 aa5.76□□□□□ -1.49
SNRNP40-204ENST00000474025 CCDC12Q8WUD4 166 aaPredicted RBP5.76□□□□□ -1.49
SNRNP40-204ENST00000474025 SMG7Q92540 1137 aaKnown RBP5.76□□□□□ -1.49
SNRNP40-204ENST00000474025 GJA10Q969M2 543 aa5.76□□□□□ -1.49
SNRNP40-204ENST00000474025 NLRP4Q96MN2 994 aa5.76□□□□□ -1.49
SNRNP40-204ENST00000474025 SH2D3AQ9BRG2 576 aa5.76□□□□□ -1.49
SNRNP40-204ENST00000474025 TMEM175Q9BSA9 504 aa5.76□□□□□ -1.49
SNRNP40-204ENST00000474025 ESYT1Q9BSJ8 1104 aa5.76□□□□□ -1.49
SNRNP40-204ENST00000474025 HERC2P3Q9BVR0 1158 aa5.76□□□□□ -1.49
SNRNP40-204ENST00000474025 NIFKQ9BYG3 293 aaKnown RBP5.76□□□□□ -1.49
SNRNP40-204ENST00000474025 FOXQ1Q9C009 403 aa5.76□□□□□ -1.49
SNRNP40-204ENST00000474025 INO80BQ9C086 356 aaPredicted RBP5.76□□□□□ -1.49
SNRNP40-204ENST00000474025 RSAD1Q9HA92 442 aa5.76□□□□□ -1.49
SNRNP40-204ENST00000474025 IFT122Q9HBG6 1241 aa5.76□□□□□ -1.49
SNRNP40-204ENST00000474025 RXFP1Q9HBX9 757 aa5.76□□□□□ -1.49
SNRNP40-204ENST00000474025 C6orf50Q9HD87 102 aa5.76□□□□□ -1.49
SNRNP40-204ENST00000474025 ANO2Q9NQ90 1003 aa5.76□□□□□ -1.49
SNRNP40-204ENST00000474025 SLC2A4RGQ9NR83 387 aa5.76□□□□□ -1.49
SNRNP40-204ENST00000474025 SUCLA2Q9P2R7 463 aaPredicted RBP5.76□□□□□ -1.49
SNRNP40-204ENST00000474025 PRG3Q9Y2Y8 225 aaPredicted RBP5.76□□□□□ -1.49
SNRNP40-204ENST00000474025 SIT1Q9Y3P8 196 aa5.76□□□□□ -1.49
SNRNP40-204ENST00000474025 SMG1Q96Q15 3661 aaKnown RBP5.76□□□□□ -1.49
SNRNP40-204ENST00000474025 NID2Q14112 1375 aa5.76□□□□□ -1.49
SNRNP40-204ENST00000474025 DSPP15924 2871 aaKnown RBP5.76□□□□□ -1.49
SNRNP40-204ENST00000474025 CNTNAP2Q9UHC6 1331 aa5.75□□□□□ -1.49
SNRNP40-204ENST00000474025 F8W810 466 aa5.75□□□□□ -1.49
SNRNP40-204ENST00000474025 LRRN2O75325 713 aa5.75□□□□□ -1.49
SNRNP40-204ENST00000474025 POMCP01189 267 aa5.75□□□□□ -1.49
SNRNP40-204ENST00000474025 MYBP10242 640 aa5.75□□□□□ -1.49
SNRNP40-204ENST00000474025 LAMP2P13473 410 aa5.75□□□□□ -1.49
SNRNP40-204ENST00000474025 GNA11P29992 359 aa5.75□□□□□ -1.49
SNRNP40-204ENST00000474025 HOXA11P31270 313 aaPredicted RBP5.75□□□□□ -1.49
SNRNP40-204ENST00000474025 GLUD2P49448 558 aa5.75□□□□□ -1.49
SNRNP40-204ENST00000474025 DSG1Q02413 1049 aa5.75□□□□□ -1.49
SNRNP40-204ENST00000474025 DSC1Q08554 894 aa5.75□□□□□ -1.49
SNRNP40-204ENST00000474025 DMWDQ09019 674 aa5.75□□□□□ -1.49
SNRNP40-204ENST00000474025 RSPO4Q2I0M5 234 aaPredicted RBP5.75□□□□□ -1.49
SNRNP40-204ENST00000474025 ADCK5Q3MIX3 580 aa5.75□□□□□ -1.49
SNRNP40-204ENST00000474025 UBXN11Q5T124 520 aa5.75□□□□□ -1.49
SNRNP40-204ENST00000474025 ELMSAN1Q6PJG2 1045 aa5.75□□□□□ -1.49
SNRNP40-204ENST00000474025 DCLRE1AQ6PJP8 1040 aa5.75□□□□□ -1.49
SNRNP40-204ENST00000474025 ANO5Q75V66 913 aa5.75□□□□□ -1.49
SNRNP40-204ENST00000474025 GET4Q7L5D6 327 aaPredicted RBP5.75□□□□□ -1.49
SNRNP40-204ENST00000474025 DHX32Q7L7V1 743 aaKnown RBP5.75□□□□□ -1.49
SNRNP40-204ENST00000474025 MIER3Q7Z3K6 550 aa5.75□□□□□ -1.49
SNRNP40-204ENST00000474025 COLGALT2Q8IYK4 626 aa5.75□□□□□ -1.49
SNRNP40-204ENST00000474025 BICD2Q8TD16 824 aa5.75□□□□□ -1.49
SNRNP40-204ENST00000474025 KCNV2Q8TDN2 545 aa5.75□□□□□ -1.49
SNRNP40-204ENST00000474025 HDAC7Q8WUI4 952 aa5.75□□□□□ -1.49
SNRNP40-204ENST00000474025 PGBD4Q96DM1 585 aa5.75□□□□□ -1.49
SNRNP40-204ENST00000474025 CHAMP1Q96JM3 812 aa5.75□□□□□ -1.49
SNRNP40-204ENST00000474025 CCDC136Q96JN2 1154 aa5.75□□□□□ -1.49
SNRNP40-204ENST00000474025 FAM193BQ96PV7 902 aaPredicted RBP5.75□□□□□ -1.49
SNRNP40-204ENST00000474025 TEKT3Q9BXF9 490 aa5.75□□□□□ -1.49
SNRNP40-204ENST00000474025 PLEKHA4Q9H4M7 779 aa5.75□□□□□ -1.49
SNRNP40-204ENST00000474025 MINDY3Q9H8M7 445 aa5.75□□□□□ -1.49
SNRNP40-204ENST00000474025 CHST7Q9NS84 486 aa5.75□□□□□ -1.49
SNRNP40-204ENST00000474025 ZDHHC7Q9NXF8 308 aa5.75□□□□□ -1.49
SNRNP40-204ENST00000474025 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.75□□□□□ -1.49
SNRNP40-204ENST00000474025 KANSL3Q9P2N6 904 aa5.75□□□□□ -1.49
SNRNP40-204ENST00000474025 DPP7Q9UHL4 492 aa5.75□□□□□ -1.49
SNRNP40-204ENST00000474025 SSX2IPQ9Y2D8 614 aa5.75□□□□□ -1.49
SNRNP40-204ENST00000474025 FAN1Q9Y2M0 1017 aa5.75□□□□□ -1.49
SNRNP40-204ENST00000474025 COL4A3BPQ9Y5P4 624 aa5.75□□□□□ -1.49
SNRNP40-204ENST00000474025 NUMBLQ9Y6R0 609 aa5.75□□□□□ -1.49
SNRNP40-204ENST00000474025 ATRXP46100 2492 aa5.75□□□□□ -1.49
SNRNP40-204ENST00000474025 COL4A3Q01955 1670 aa5.75□□□□□ -1.49
SNRNP40-204ENST00000474025 ZFYVE26Q68DK2 2539 aa5.75□□□□□ -1.49
SNRNP40-204ENST00000474025 CCDC196A0A1B0GTZ2 297 aa5.74□□□□□ -1.49
SNRNP40-204ENST00000474025 ARL5CA6NH57 179 aa5.74□□□□□ -1.49
SNRNP40-204ENST00000474025 DDX11L8A8MPP1 907 aa5.74□□□□□ -1.49
SNRNP40-204ENST00000474025 SPTLC1O15269 473 aa5.74□□□□□ -1.49
SNRNP40-204ENST00000474025 PRPF3O43395 683 aaKnown RBP5.74□□□□□ -1.49
SNRNP40-204ENST00000474025 TGM5O43548 720 aa5.74□□□□□ -1.49
SNRNP40-204ENST00000474025 KINO60870 393 aaKnown RBP5.74□□□□□ -1.49
SNRNP40-204ENST00000474025 C1RP00736 705 aa5.74□□□□□ -1.49
SNRNP40-204ENST00000474025 SPATA31D3P0C874 917 aa5.74□□□□□ -1.49
SNRNP40-204ENST00000474025 NCLP19338 710 aaKnown RBP5.74□□□□□ -1.49
SNRNP40-204ENST00000474025 MLH1P40692 756 aa5.74□□□□□ -1.49
SNRNP40-204ENST00000474025 OR1G1P47890 313 aa5.74□□□□□ -1.49
SNRNP40-204ENST00000474025 USP11P51784 963 aa5.74□□□□□ -1.49
SNRNP40-204ENST00000474025 STARD6P59095 220 aa5.74□□□□□ -1.49
SNRNP40-204ENST00000474025 ACAP1Q15027 740 aa5.74□□□□□ -1.49
SNRNP40-204ENST00000474025 ZNF528Q3MIS6 628 aa5.74□□□□□ -1.49
SNRNP40-204ENST00000474025 TSGA10IPQ3SY00 556 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms