RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 Q7L0L9 218 aa13.6□□□□□ -0.23
DDX56-209ENST00000473924 MAP4K3Q8IVH8 894 aa13.6□□□□□ -0.23
DDX56-209ENST00000473924 SYCP3Q8IZU3 236 aa13.6□□□□□ -0.23
DDX56-209ENST00000473924 LRRC43Q8N309 656 aa13.6□□□□□ -0.23
DDX56-209ENST00000473924 DEFB123Q8N688 67 aa13.6□□□□□ -0.23
DDX56-209ENST00000473924 ENGASEQ8NFI3 743 aa13.6□□□□□ -0.23
DDX56-209ENST00000473924 URGCPQ8TCY9 931 aa13.6□□□□□ -0.23
DDX56-209ENST00000473924 ARNTL2Q8WYA1 636 aa13.6□□□□□ -0.23
DDX56-209ENST00000473924 RSPH1Q8WYR4 309 aa13.6□□□□□ -0.23
DDX56-209ENST00000473924 KCNN1Q92952 543 aa13.6□□□□□ -0.23
DDX56-209ENST00000473924 HPS3Q969F9 1004 aa13.6□□□□□ -0.23
DDX56-209ENST00000473924 CASD1Q96PB1 797 aa13.6□□□□□ -0.23
DDX56-209ENST00000473924 ACCSQ96QU6 501 aa13.6□□□□□ -0.23
DDX56-209ENST00000473924 MRPL9Q9BYD2 267 aaKnown RBP13.6□□□□□ -0.23
DDX56-209ENST00000473924 CDT1Q9H211 546 aa13.6□□□□□ -0.23
DDX56-209ENST00000473924 RNF39Q9H2S5 420 aa13.6□□□□□ -0.23
DDX56-209ENST00000473924 TTYH1Q9H313 450 aaPredicted RBP13.6□□□□□ -0.23
DDX56-209ENST00000473924 SEMA6BQ9H3T3 888 aa13.6□□□□□ -0.23
DDX56-209ENST00000473924 RNF19AQ9NV58 838 aa13.6□□□□□ -0.23
DDX56-209ENST00000473924 SNTG2Q9NY99 539 aa13.6□□□□□ -0.23
DDX56-209ENST00000473924 RWDD3Q9Y3V2 267 aa13.6□□□□□ -0.23
DDX56-209ENST00000473924 GOLGA6L22H0YM25 854 aa13.59□□□□□ -0.23
DDX56-209ENST00000473924 OFD1O75665 1012 aa13.59□□□□□ -0.23
DDX56-209ENST00000473924 RPN1P04843 607 aaKnown RBP13.59□□□□□ -0.23
DDX56-209ENST00000473924 PRR29P0C7W0 189 aa13.59□□□□□ -0.23
DDX56-209ENST00000473924 MCF2P10911 925 aa13.59□□□□□ -0.23
DDX56-209ENST00000473924 MLH1P40692 756 aa13.59□□□□□ -0.23
DDX56-209ENST00000473924 CASP5P51878 434 aa13.59□□□□□ -0.23
DDX56-209ENST00000473924 RNASELQ05823 741 aaKnown RBP13.59□□□□□ -0.23
DDX56-209ENST00000473924 NOLC1Q14978 699 aaKnown RBP eCLIP13.59□□□□□ -0.23
DDX56-209ENST00000473924 POSTNQ15063 836 aa13.59□□□□□ -0.23
DDX56-209ENST00000473924 NOMO2Q5JPE7 1267 aa13.59□□□□□ -0.23
DDX56-209ENST00000473924 L1TD1Q5T7N2 865 aaKnown RBP13.59□□□□□ -0.23
DDX56-209ENST00000473924 CLEC17AQ6ZS10 378 aa13.59□□□□□ -0.23
DDX56-209ENST00000473924 THNSL1Q8IYQ7 743 aa13.59□□□□□ -0.23
DDX56-209ENST00000473924 ZBTB45Q96K62 511 aaPredicted RBP13.59□□□□□ -0.23
DDX56-209ENST00000473924 TIGD1Q96MW7 591 aa13.59□□□□□ -0.23
DDX56-209ENST00000473924 SAMD11Q96NU1 681 aa13.59□□□□□ -0.23
DDX56-209ENST00000473924 RPS6KC1Q96S38 1066 aa13.59□□□□□ -0.23
DDX56-209ENST00000473924 C17orf80Q9BSJ5 609 aa13.59□□□□□ -0.23
DDX56-209ENST00000473924 CCDC94Q9BW85 323 aaPredicted RBP13.59□□□□□ -0.23
DDX56-209ENST00000473924 PTPRHQ9HD43 1115 aa13.59□□□□□ -0.23
DDX56-209ENST00000473924 AAASQ9NRG9 546 aa13.59□□□□□ -0.23
DDX56-209ENST00000473924 TYW1Q9NV66 732 aaKnown RBP13.59□□□□□ -0.23
DDX56-209ENST00000473924 KANSL3Q9P2N6 904 aa13.59□□□□□ -0.23
DDX56-209ENST00000473924 GDAQ9Y2T3 454 aa13.59□□□□□ -0.23
DDX56-209ENST00000473924 GIT1Q9Y2X7 761 aa13.59□□□□□ -0.23
DDX56-209ENST00000473924 MRPL42Q9Y6G3 142 aaKnown RBP13.59□□□□□ -0.23
DDX56-209ENST00000473924 COL4A6Q14031 1691 aa13.59□□□□□ -0.23
DDX56-209ENST00000473924 LAMA2P24043 3122 aaKnown RBP13.59□□□□□ -0.23
DDX56-209ENST00000473924 FNDC1Q4ZHG4 1894 aaPredicted RBP13.59□□□□□ -0.23
DDX56-209ENST00000473924 KLRC4O43908 158 aa13.58□□□□□ -0.24
DDX56-209ENST00000473924 PPP1R37O75864 691 aa13.58□□□□□ -0.24
DDX56-209ENST00000473924 PRPF6O94906 941 aaKnown RBP13.58□□□□□ -0.24
DDX56-209ENST00000473924 PIGRP01833 764 aa13.58□□□□□ -0.24
DDX56-209ENST00000473924 PROZP22891 400 aa13.58□□□□□ -0.24
DDX56-209ENST00000473924 CTNNB1P35222 781 aa13.58□□□□□ -0.24
DDX56-209ENST00000473924 YARSP54577 528 aaKnown RBP13.58□□□□□ -0.24
DDX56-209ENST00000473924 OSTNP61366 133 aa13.58□□□□□ -0.24
DDX56-209ENST00000473924 ERVK-21P61565 698 aa13.58□□□□□ -0.24
DDX56-209ENST00000473924 MCL1Q07820 350 aa13.58□□□□□ -0.24
DDX56-209ENST00000473924 DPYDQ12882 1025 aa13.58□□□□□ -0.24
DDX56-209ENST00000473924 PSMD2Q13200 908 aa13.58□□□□□ -0.24
DDX56-209ENST00000473924 KMT5BQ4FZB7 885 aa13.58□□□□□ -0.24
DDX56-209ENST00000473924 SPRED2Q7Z698 418 aa13.58□□□□□ -0.24
DDX56-209ENST00000473924 TMEM192Q8IY95 271 aa13.58□□□□□ -0.24
DDX56-209ENST00000473924 FAM193BQ96PV7 902 aaPredicted RBP13.58□□□□□ -0.24
DDX56-209ENST00000473924 GAD1Q99259 594 aa13.58□□□□□ -0.24
DDX56-209ENST00000473924 STRA6Q9BX79 667 aa13.58□□□□□ -0.24
DDX56-209ENST00000473924 FGFBP2Q9BYJ0 223 aa13.58□□□□□ -0.24
DDX56-209ENST00000473924 GBP3Q9H0R5 595 aa13.58□□□□□ -0.24
DDX56-209ENST00000473924 TMEM206Q9H813 350 aa13.58□□□□□ -0.24
DDX56-209ENST00000473924 SLC39A2Q9NP94 309 aa13.58□□□□□ -0.24
DDX56-209ENST00000473924 KLK14Q9P0G3 267 aa13.58□□□□□ -0.24
DDX56-209ENST00000473924 ARL5CA6NH57 179 aa13.57□□□□□ -0.24
DDX56-209ENST00000473924 EIF3DO15371 548 aaKnown RBP eCLIP13.57□□□□□ -0.24
DDX56-209ENST00000473924 RECQL4O94761 1208 aa13.57□□□□□ -0.24
DDX56-209ENST00000473924 POMCP01189 267 aa13.57□□□□□ -0.24
DDX56-209ENST00000473924 LAG3P18627 525 aa13.57□□□□□ -0.24
DDX56-209ENST00000473924 BMPR1AP36894 532 aa13.57□□□□□ -0.24
DDX56-209ENST00000473924 GRM5P41594 1212 aa13.57□□□□□ -0.24
DDX56-209ENST00000473924 EHHADHQ08426 723 aa13.57□□□□□ -0.24
DDX56-209ENST00000473924 KCNA1Q09470 495 aa13.57□□□□□ -0.24
DDX56-209ENST00000473924 PNOCQ13519 176 aa13.57□□□□□ -0.24
DDX56-209ENST00000473924 GRIN2CQ14957 1233 aa13.57□□□□□ -0.24
DDX56-209ENST00000473924 EPC2Q52LR7 807 aa13.57□□□□□ -0.24
DDX56-209ENST00000473924 SLFN12LQ6IEE8 588 aa13.57□□□□□ -0.24
DDX56-209ENST00000473924 CEP120Q8N960 986 aa13.57□□□□□ -0.24
DDX56-209ENST00000473924 GLIS3Q8NEA6 775 aa13.57□□□□□ -0.24
DDX56-209ENST00000473924 FBXO22Q8NEZ5 403 aa13.57□□□□□ -0.24
DDX56-209ENST00000473924 CLP1Q92989 425 aaKnown RBP13.57□□□□□ -0.24
DDX56-209ENST00000473924 ZFP42Q96MM3 310 aa13.57□□□□□ -0.24
DDX56-209ENST00000473924 ACAP3Q96P50 834 aa13.57□□□□□ -0.24
DDX56-209ENST00000473924 MSTO1Q9BUK6 570 aa13.57□□□□□ -0.24
DDX56-209ENST00000473924 PRDM12Q9H4Q4 367 aa13.57□□□□□ -0.24
DDX56-209ENST00000473924 TOPORSQ9NS56 1045 aaPredicted RBP13.57□□□□□ -0.24
DDX56-209ENST00000473924 TBC1D13Q9NVG8 400 aa13.57□□□□□ -0.24
DDX56-209ENST00000473924 HCSTQ9UBK5 93 aa13.57□□□□□ -0.24
DDX56-209ENST00000473924 PCDHB12Q9Y5F1 795 aa13.57□□□□□ -0.24
DDX56-209ENST00000473924 ANKRD63C9JTQ0 380 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms