RNA–Protein interactions for RNA: ENST00000473344.1

CKS1B-205, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-205ENST00000473344 DTWD2Q8NBA8 298 aa7.73□□□□□ -1.17
CKS1B-205ENST00000473344 CNNM3Q8NE01 707 aa7.73□□□□□ -1.17
CKS1B-205ENST00000473344 PSPC1Q8WXF1 523 aaKnown RBP7.73□□□□□ -1.17
CKS1B-205ENST00000473344 CEP170P1Q96L14 293 aa7.73□□□□□ -1.17
CKS1B-205ENST00000473344 HINFPQ9BQA5 517 aa7.73□□□□□ -1.17
CKS1B-205ENST00000473344 PIDD1Q9HB75 910 aa7.73□□□□□ -1.17
CKS1B-205ENST00000473344 MAN1C1Q9NR34 630 aa7.73□□□□□ -1.17
CKS1B-205ENST00000473344 SH3GLB2Q9NR46 395 aa7.73□□□□□ -1.17
CKS1B-205ENST00000473344 WNT16Q9UBV4 365 aa7.73□□□□□ -1.17
CKS1B-205ENST00000473344 PCDHA4Q9UN74 947 aa7.73□□□□□ -1.17
CKS1B-205ENST00000473344 COL4A3BPQ9Y5P4 624 aa7.73□□□□□ -1.17
CKS1B-205ENST00000473344 CPLX1O14810 134 aa7.72□□□□□ -1.17
CKS1B-205ENST00000473344 INPPL1O15357 1258 aa7.72□□□□□ -1.17
CKS1B-205ENST00000473344 NARSO43776 548 aaKnown RBP7.72□□□□□ -1.17
CKS1B-205ENST00000473344 CDC45O75419 566 aa7.72□□□□□ -1.17
CKS1B-205ENST00000473344 TDP2O95551 362 aa7.72□□□□□ -1.17
CKS1B-205ENST00000473344 LMNAP02545 664 aaKnown RBP7.72□□□□□ -1.17
CKS1B-205ENST00000473344 MYBP10242 640 aa7.72□□□□□ -1.17
CKS1B-205ENST00000473344 ITGA4P13612 1032 aa7.72□□□□□ -1.17
CKS1B-205ENST00000473344 IFNAR1P17181 557 aa7.72□□□□□ -1.17
CKS1B-205ENST00000473344 NPR3P17342 541 aa7.72□□□□□ -1.17
CKS1B-205ENST00000473344 RFC5P40937 340 aa7.72□□□□□ -1.17
CKS1B-205ENST00000473344 QARSP47897 775 aaKnown RBP7.72□□□□□ -1.17
CKS1B-205ENST00000473344 GLUD2P49448 558 aa7.72□□□□□ -1.17
CKS1B-205ENST00000473344 CCT2P78371 535 aaKnown RBP7.72□□□□□ -1.17
CKS1B-205ENST00000473344 SSRP1Q08945 709 aaKnown RBP7.72□□□□□ -1.17
CKS1B-205ENST00000473344 SPECC1Q5M775 1068 aa7.72□□□□□ -1.17
CKS1B-205ENST00000473344 ZC3H14Q6PJT7 736 aaKnown RBP7.72□□□□□ -1.17
CKS1B-205ENST00000473344 AGMOQ6ZNB7 445 aa7.72□□□□□ -1.17
CKS1B-205ENST00000473344 ANO5Q75V66 913 aa7.72□□□□□ -1.17
CKS1B-205ENST00000473344 OTUD6AQ7L8S5 288 aa7.72□□□□□ -1.17
CKS1B-205ENST00000473344 SRGAP1Q7Z6B7 1085 aa7.72□□□□□ -1.17
CKS1B-205ENST00000473344 HACE1Q8IYU2 909 aa7.72□□□□□ -1.17
CKS1B-205ENST00000473344 CMASQ8NFW8 434 aaPredicted RBP7.72□□□□□ -1.17
CKS1B-205ENST00000473344 TCP11Q8WWU5 503 aa7.72□□□□□ -1.17
CKS1B-205ENST00000473344 PRPF31Q8WWY3 499 aaKnown RBP7.72□□□□□ -1.17
CKS1B-205ENST00000473344 ZNF516Q92618 1163 aa7.72□□□□□ -1.17
CKS1B-205ENST00000473344 NXPE3Q969Y0 559 aa7.72□□□□□ -1.17
CKS1B-205ENST00000473344 RPS6KC1Q96S38 1066 aa7.72□□□□□ -1.17
CKS1B-205ENST00000473344 VN1R3Q9BXE9 311 aa7.72□□□□□ -1.17
CKS1B-205ENST00000473344 TRIM6Q9C030 488 aaPredicted RBP7.72□□□□□ -1.17
CKS1B-205ENST00000473344 SEMA4AQ9H3S1 761 aa7.72□□□□□ -1.17
CKS1B-205ENST00000473344 IFT122Q9HBG6 1241 aa7.72□□□□□ -1.17
CKS1B-205ENST00000473344 WDR6Q9NNW5 1121 aaKnown RBP7.72□□□□□ -1.17
CKS1B-205ENST00000473344 DDX25Q9UHL0 483 aaKnown RBP7.72□□□□□ -1.17
CKS1B-205ENST00000473344 CA14Q9ULX7 337 aa7.72□□□□□ -1.17
CKS1B-205ENST00000473344 PRG3Q9Y2Y8 225 aaPredicted RBP7.72□□□□□ -1.17
CKS1B-205ENST00000473344 CLUHO75153 1309 aa7.72□□□□□ -1.17
CKS1B-205ENST00000473344 NID2Q14112 1375 aa7.71□□□□□ -1.17
CKS1B-205ENST00000473344 CYP3A7-CYP3A51PA0A087WV96 503 aa7.71□□□□□ -1.18
CKS1B-205ENST00000473344 TEX28O15482 410 aa7.71□□□□□ -1.18
CKS1B-205ENST00000473344 ASAP2O43150 1006 aa7.71□□□□□ -1.18
CKS1B-205ENST00000473344 GAS2O43903 313 aaKnown RBP7.71□□□□□ -1.18
CKS1B-205ENST00000473344 B4GALT3O60512 393 aa7.71□□□□□ -1.18
CKS1B-205ENST00000473344 LILRB3O75022 631 aa7.71□□□□□ -1.18
CKS1B-205ENST00000473344 STBD1O95210 358 aa7.71□□□□□ -1.18
CKS1B-205ENST00000473344 P4HBP07237 508 aaKnown RBP7.71□□□□□ -1.18
CKS1B-205ENST00000473344 SRFP11831 508 aa7.71□□□□□ -1.18
CKS1B-205ENST00000473344 RPS6KB1P23443 525 aa7.71□□□□□ -1.18
CKS1B-205ENST00000473344 CYP3A7P24462 503 aa7.71□□□□□ -1.18
CKS1B-205ENST00000473344 PSMA5P28066 241 aa7.71□□□□□ -1.18
CKS1B-205ENST00000473344 MLH1P40692 756 aa7.71□□□□□ -1.18
CKS1B-205ENST00000473344 AFF1P51825 1210 aaKnown RBP7.71□□□□□ -1.18
CKS1B-205ENST00000473344 NPEPPSP55786 919 aa7.71□□□□□ -1.18
CKS1B-205ENST00000473344 LAMTOR4Q0VGL1 99 aa7.71□□□□□ -1.18
CKS1B-205ENST00000473344 NTRK3Q16288 839 aa7.71□□□□□ -1.18
CKS1B-205ENST00000473344 GALNT17Q6IS24 598 aa7.71□□□□□ -1.18
CKS1B-205ENST00000473344 NOTUMQ6P988 496 aa7.71□□□□□ -1.18
CKS1B-205ENST00000473344 CPLX2Q6PUV4 134 aaKnown RBP7.71□□□□□ -1.18
CKS1B-205ENST00000473344 MOXD1Q6UVY6 613 aa7.71□□□□□ -1.18
CKS1B-205ENST00000473344 GET4Q7L5D6 327 aaPredicted RBP7.71□□□□□ -1.18
CKS1B-205ENST00000473344 MRPL10Q7Z7H8 261 aaKnown RBP7.71□□□□□ -1.18
CKS1B-205ENST00000473344 PALB2Q86YC2 1186 aa7.71□□□□□ -1.18
CKS1B-205ENST00000473344 BLIDQ8IZY5 108 aa7.71□□□□□ -1.18
CKS1B-205ENST00000473344 SLC44A3Q8N4M1 653 aa7.71□□□□□ -1.18
CKS1B-205ENST00000473344 RNF149Q8NC42 400 aa7.71□□□□□ -1.18
CKS1B-205ENST00000473344 ETNPPLQ8TBG4 499 aa7.71□□□□□ -1.18
CKS1B-205ENST00000473344 FEZF2Q8TBJ5 459 aa7.71□□□□□ -1.18
CKS1B-205ENST00000473344 RSAD2Q8WXG1 361 aa7.71□□□□□ -1.18
CKS1B-205ENST00000473344 SMG7Q92540 1137 aaKnown RBP7.71□□□□□ -1.18
CKS1B-205ENST00000473344 TMEM143Q96AN5 459 aa7.71□□□□□ -1.18
CKS1B-205ENST00000473344 CEP89Q96ST8 783 aa7.71□□□□□ -1.18
CKS1B-205ENST00000473344 HERC2P3Q9BVR0 1158 aa7.71□□□□□ -1.18
CKS1B-205ENST00000473344 PLEKHA4Q9H4M7 779 aa7.71□□□□□ -1.18
CKS1B-205ENST00000473344 NCOA5Q9HCD5 579 aaKnown RBP7.71□□□□□ -1.18
CKS1B-205ENST00000473344 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.71□□□□□ -1.18
CKS1B-205ENST00000473344 SIT1Q9Y3P8 196 aa7.71□□□□□ -1.18
CKS1B-205ENST00000473344 PPME1Q9Y570 386 aa7.71□□□□□ -1.18
CKS1B-205ENST00000473344 SNX14Q9Y5W7 946 aa7.71□□□□□ -1.18
CKS1B-205ENST00000473344 PLXNA3P51805 1871 aa7.7□□□□□ -1.18
CKS1B-205ENST00000473344 ZDBF2Q9HCK1 2354 aa7.7□□□□□ -1.18
CKS1B-205ENST00000473344 CCDC194A0A1B0GVG4 234 aa7.7□□□□□ -1.18
CKS1B-205ENST00000473344 KRBA1A5PL33 1030 aa7.7□□□□□ -1.18
CKS1B-205ENST00000473344 GOLGA6L3A6NEY3 463 aa7.7□□□□□ -1.18
CKS1B-205ENST00000473344 ARL5CA6NH57 179 aa7.7□□□□□ -1.18
CKS1B-205ENST00000473344 C3orf80F5H4A9 247 aa7.7□□□□□ -1.18
CKS1B-205ENST00000473344 INO80B-WBP1J3KQ70 363 aa7.7□□□□□ -1.18
CKS1B-205ENST00000473344 EDIL3O43854 480 aa7.7□□□□□ -1.18
CKS1B-205ENST00000473344 N4BP1O75113 896 aaKnown RBP7.7□□□□□ -1.18
CKS1B-205ENST00000473344 RFPL2O75678 378 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 303.8 ms