RNA–Protein interactions for RNA: ENST00000473073.1

PCCB-211, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 2

Gene PCCB, Length 1,964 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-211ENST00000473073 TTC26A0AVF1 554 aa13.71□□□□□ -0.21
PCCB-211ENST00000473073 EXTL3O43909 919 aa13.71□□□□□ -0.21
PCCB-211ENST00000473073 TSPAN1O60635 241 aa13.71□□□□□ -0.21
PCCB-211ENST00000473073 ERLIN2O94905 339 aa13.71□□□□□ -0.21
PCCB-211ENST00000473073 CTSHP09668 335 aa13.71□□□□□ -0.21
PCCB-211ENST00000473073 DLATP10515 647 aaKnown RBP13.71□□□□□ -0.21
PCCB-211ENST00000473073 ACTN1P12814 892 aa13.71□□□□□ -0.21
PCCB-211ENST00000473073 SFPQP23246 707 aaKnown RBP eCLIP13.71□□□□□ -0.21
PCCB-211ENST00000473073 GSDMDP57764 484 aa13.71□□□□□ -0.21
PCCB-211ENST00000473073 CYP24A1Q07973 514 aa13.71□□□□□ -0.21
PCCB-211ENST00000473073 PPP3CAQ08209 521 aa13.71□□□□□ -0.21
PCCB-211ENST00000473073 ZNF568Q3ZCX4 644 aa13.71□□□□□ -0.21
PCCB-211ENST00000473073 LMBRD2Q68DH5 695 aaPredicted RBP13.71□□□□□ -0.21
PCCB-211ENST00000473073 SLFN12LQ6IEE8 588 aa13.71□□□□□ -0.21
PCCB-211ENST00000473073 TSHZ1Q6ZSZ6 1077 aa13.71□□□□□ -0.21
PCCB-211ENST00000473073 CEP120Q8N960 986 aa13.71□□□□□ -0.21
PCCB-211ENST00000473073 LSM14BQ9BX40 385 aaKnown RBP13.71□□□□□ -0.21
PCCB-211ENST00000473073 RNF208Q9H0X6 261 aa13.71□□□□□ -0.21
PCCB-211ENST00000473073 AGPAT5Q9NUQ2 364 aa13.71□□□□□ -0.21
PCCB-211ENST00000473073 LRRIQ3A6PVS8 624 aaPredicted RBP13.71□□□□□ -0.22
PCCB-211ENST00000473073 FAM189A1O60320 539 aa13.71□□□□□ -0.22
PCCB-211ENST00000473073 MFAP3LO75121 409 aa13.71□□□□□ -0.22
PCCB-211ENST00000473073 HSPA8P11142 646 aaKnown RBP13.71□□□□□ -0.22
PCCB-211ENST00000473073 CCL5P13501 91 aa13.71□□□□□ -0.22
PCCB-211ENST00000473073 SLC9A1P19634 815 aa13.71□□□□□ -0.22
PCCB-211ENST00000473073 GCLMP48507 274 aa13.71□□□□□ -0.22
PCCB-211ENST00000473073 FMO5P49326 533 aa13.71□□□□□ -0.22
PCCB-211ENST00000473073 NOLC1Q14978 699 aaKnown RBP eCLIP13.71□□□□□ -0.22
PCCB-211ENST00000473073 PTGISQ16647 500 aa13.71□□□□□ -0.22
PCCB-211ENST00000473073 MPZL3Q6UWV2 235 aa13.71□□□□□ -0.22
PCCB-211ENST00000473073 THNSL1Q8IYQ7 743 aa13.71□□□□□ -0.22
PCCB-211ENST00000473073 GLT1D1Q96MS3 346 aa13.71□□□□□ -0.22
PCCB-211ENST00000473073 GCOM2Q9BZD3 368 aaPredicted RBP13.71□□□□□ -0.22
PCCB-211ENST00000473073 CDT1Q9H211 546 aa13.71□□□□□ -0.22
PCCB-211ENST00000473073 PDZD7Q9H5P4 517 aa13.71□□□□□ -0.22
PCCB-211ENST00000473073 PTPRHQ9HD43 1115 aa13.71□□□□□ -0.22
PCCB-211ENST00000473073 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.71□□□□□ -0.22
PCCB-211ENST00000473073 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.71□□□□□ -0.22
PCCB-211ENST00000473073 CNTNAP2Q9UHC6 1331 aa13.7□□□□□ -0.22
PCCB-211ENST00000473073 MOXD2PA6NHM9 499 aa13.7□□□□□ -0.22
PCCB-211ENST00000473073 ZNF233A6NK53 670 aa13.7□□□□□ -0.22
PCCB-211ENST00000473073 AKR1B15C9JRZ8 316 aaPredicted RBP13.7□□□□□ -0.22
PCCB-211ENST00000473073 LRRN2O75325 713 aa13.7□□□□□ -0.22
PCCB-211ENST00000473073 PROZP22891 400 aa13.7□□□□□ -0.22
PCCB-211ENST00000473073 LBX1P52954 281 aa13.7□□□□□ -0.22
PCCB-211ENST00000473073 PPP2R3AQ06190 1150 aa13.7□□□□□ -0.22
PCCB-211ENST00000473073 MCL1Q07820 350 aa13.7□□□□□ -0.22
PCCB-211ENST00000473073 FAM187BQ17R55 369 aa13.7□□□□□ -0.22
PCCB-211ENST00000473073 HS1BP3Q53T59 392 aa13.7□□□□□ -0.22
PCCB-211ENST00000473073 SRGAP1Q7Z6B7 1085 aa13.7□□□□□ -0.22
PCCB-211ENST00000473073 TMEM192Q8IY95 271 aa13.7□□□□□ -0.22
PCCB-211ENST00000473073 CCDC150Q8NCX0 1101 aa13.7□□□□□ -0.22
PCCB-211ENST00000473073 PARD3BQ8TEW8 1205 aa13.7□□□□□ -0.22
PCCB-211ENST00000473073 MFSD14AQ96MC6 490 aa13.7□□□□□ -0.22
PCCB-211ENST00000473073 TTYH3Q9C0H2 523 aa13.7□□□□□ -0.22
PCCB-211ENST00000473073 PDE11AQ9HCR9 933 aa13.7□□□□□ -0.22
PCCB-211ENST00000473073 PAK6Q9NQU5 681 aaPredicted RBP13.7□□□□□ -0.22
PCCB-211ENST00000473073 RBAKQ9NYW8 714 aaPredicted RBP13.7□□□□□ -0.22
PCCB-211ENST00000473073 GCNT4Q9P109 453 aa13.7□□□□□ -0.22
PCCB-211ENST00000473073 PYCARDQ9ULZ3 195 aa13.7□□□□□ -0.22
PCCB-211ENST00000473073 MAPK13O15264 365 aa13.69□□□□□ -0.22
PCCB-211ENST00000473073 DARSP14868 501 aaKnown RBP13.69□□□□□ -0.22
PCCB-211ENST00000473073 CCZ1BP86790 482 aa13.69□□□□□ -0.22
PCCB-211ENST00000473073 CCZ1P86791 482 aaPredicted RBP13.69□□□□□ -0.22
PCCB-211ENST00000473073 MYL7Q01449 175 aa13.69□□□□□ -0.22
PCCB-211ENST00000473073 SNX17Q15036 470 aa13.69□□□□□ -0.22
PCCB-211ENST00000473073 TAF2Q6P1X5 1199 aa13.69□□□□□ -0.22
PCCB-211ENST00000473073 CATSPER4Q7RTX7 472 aa13.69□□□□□ -0.22
PCCB-211ENST00000473073 SERINC5Q86VE9 423 aa13.69□□□□□ -0.22
PCCB-211ENST00000473073 TNFSF13BQ9Y275 285 aa13.69□□□□□ -0.22
PCCB-211ENST00000473073 CDY2AQ9Y6F7 541 aa13.69□□□□□ -0.22
PCCB-211ENST00000473073 PTPRJQ12913 1337 aa13.69□□□□□ -0.22
PCCB-211ENST00000473073 KBTBD13C9JR72 458 aa13.69□□□□□ -0.22
PCCB-211ENST00000473073 NOL4O94818 638 aa13.69□□□□□ -0.22
PCCB-211ENST00000473073 EIF4BP23588 611 aaKnown RBP13.69□□□□□ -0.22
PCCB-211ENST00000473073 KRT9P35527 623 aa13.69□□□□□ -0.22
PCCB-211ENST00000473073 EXOC3L4Q17RC7 722 aa13.69□□□□□ -0.22
PCCB-211ENST00000473073 SESTD1Q86VW0 696 aa13.69□□□□□ -0.22
PCCB-211ENST00000473073 C17orf53Q8N3J3 647 aaPredicted RBP13.69□□□□□ -0.22
PCCB-211ENST00000473073 ARRDC4Q8NCT1 418 aa13.69□□□□□ -0.22
PCCB-211ENST00000473073 NEK11Q8NG66 645 aa13.69□□□□□ -0.22
PCCB-211ENST00000473073 ELMO3Q96BJ8 720 aa13.69□□□□□ -0.22
PCCB-211ENST00000473073 FAM212AQ96EL1 285 aa13.69□□□□□ -0.22
PCCB-211ENST00000473073 PRIMPOLQ96LW4 560 aa13.69□□□□□ -0.22
PCCB-211ENST00000473073 OSBPL7Q9BZF2 842 aa13.69□□□□□ -0.22
PCCB-211ENST00000473073 NLRC4Q9NPP4 1024 aa13.69□□□□□ -0.22
PCCB-211ENST00000473073 STARD7Q9NQZ5 370 aa13.69□□□□□ -0.22
PCCB-211ENST00000473073 OGTO15294 1046 aa13.68□□□□□ -0.22
PCCB-211ENST00000473073 CABYRO75952 493 aa13.68□□□□□ -0.22
PCCB-211ENST00000473073 TPM1P09493 284 aa13.68□□□□□ -0.22
PCCB-211ENST00000473073 PON1P27169 355 aa13.68□□□□□ -0.22
PCCB-211ENST00000473073 HOXA11P31270 313 aaPredicted RBP13.68□□□□□ -0.22
PCCB-211ENST00000473073 THPOP40225 353 aa13.68□□□□□ -0.22
PCCB-211ENST00000473073 MRPS6P82932 125 aaKnown RBP13.68□□□□□ -0.22
PCCB-211ENST00000473073 TRIM14Q14142 442 aa13.68□□□□□ -0.22
PCCB-211ENST00000473073 GJB7Q6PEY0 223 aa13.68□□□□□ -0.22
PCCB-211ENST00000473073 DHX38Q92620 1227 aaKnown RBP13.68□□□□□ -0.22
PCCB-211ENST00000473073 TSEN34Q9BSV6 310 aaKnown RBP13.68□□□□□ -0.22
PCCB-211ENST00000473073 CELF4Q9BZC1 486 aaKnown RBP13.68□□□□□ -0.22
PCCB-211ENST00000473073 TMEM117Q9H0C3 514 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms