RNA–Protein interactions for RNA: ENST00000473066.5

MRPL55-226, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 820 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-226ENST00000473066 RBM19Q9Y4C8 960 aaKnown RBP17.17■□□□□ 0.34
MRPL55-226ENST00000473066 HIDE1A8MVS5 230 aa17.16■□□□□ 0.34
MRPL55-226ENST00000473066 MBTPS2O43462 519 aa17.16■□□□□ 0.34
MRPL55-226ENST00000473066 STX6O43752 255 aa17.16■□□□□ 0.34
MRPL55-226ENST00000473066 DDHD2O94830 711 aa17.16■□□□□ 0.34
MRPL55-226ENST00000473066 CXCL14O95715 111 aa17.16■□□□□ 0.34
MRPL55-226ENST00000473066 GLP2RO95838 553 aa17.16■□□□□ 0.34
MRPL55-226ENST00000473066 KRT18P05783 430 aaKnown RBP17.16■□□□□ 0.34
MRPL55-226ENST00000473066 NPTX2P47972 431 aa17.16■□□□□ 0.34
MRPL55-226ENST00000473066 SMTNP53814 917 aa17.16■□□□□ 0.34
MRPL55-226ENST00000473066 RAD51AP2Q09MP3 1159 aa17.16■□□□□ 0.34
MRPL55-226ENST00000473066 ATF7IP2Q5U623 682 aa17.16■□□□□ 0.34
MRPL55-226ENST00000473066 LLGL2Q6P1M3 1020 aa17.16■□□□□ 0.34
MRPL55-226ENST00000473066 FAM178BQ8IXR5 827 aa17.16■□□□□ 0.34
MRPL55-226ENST00000473066 CASP10Q92851 521 aa17.16■□□□□ 0.34
MRPL55-226ENST00000473066 POP1Q99575 1024 aaKnown RBP17.16■□□□□ 0.34
MRPL55-226ENST00000473066 MRPL4Q9BYD3 311 aaKnown RBP17.16■□□□□ 0.34
MRPL55-226ENST00000473066 ZSCAN16Q9H4T2 348 aaPredicted RBP17.16■□□□□ 0.34
MRPL55-226ENST00000473066 KLK14Q9P0G3 267 aa17.16■□□□□ 0.34
MRPL55-226ENST00000473066 PRKAG3Q9UGI9 489 aa17.16■□□□□ 0.34
MRPL55-226ENST00000473066 C2orf71A6NGG8 1288 aa17.15■□□□□ 0.34
MRPL55-226ENST00000473066 NRP1O14786 923 aa17.15■□□□□ 0.34
MRPL55-226ENST00000473066 B4GALT3O60512 393 aa17.15■□□□□ 0.34
MRPL55-226ENST00000473066 URODP06132 367 aa17.15■□□□□ 0.34
MRPL55-226ENST00000473066 CTSAP10619 480 aa17.15■□□□□ 0.34
MRPL55-226ENST00000473066 AFF1P51825 1210 aaKnown RBP17.15■□□□□ 0.34
MRPL55-226ENST00000473066 STRN3Q13033 797 aa17.15■□□□□ 0.34
MRPL55-226ENST00000473066 ZNF568Q3ZCX4 644 aa17.15■□□□□ 0.34
MRPL55-226ENST00000473066 GPBP1Q86WP2 473 aa17.15■□□□□ 0.34
MRPL55-226ENST00000473066 COLGALT2Q8IYK4 626 aa17.15■□□□□ 0.34
MRPL55-226ENST00000473066 DAW1Q8N136 415 aa17.15■□□□□ 0.34
MRPL55-226ENST00000473066 MRPL43Q8N983 215 aaKnown RBP17.15■□□□□ 0.34
MRPL55-226ENST00000473066 BCL7CQ8WUZ0 217 aaPredicted RBP17.15■□□□□ 0.34
MRPL55-226ENST00000473066 MSLNLQ96KJ4 702 aa17.15■□□□□ 0.34
MRPL55-226ENST00000473066 COLEC11Q9BWP8 271 aa17.15■□□□□ 0.34
MRPL55-226ENST00000473066 TMEM134Q9H6X4 195 aa17.15■□□□□ 0.34
MRPL55-226ENST00000473066 SNTG2Q9NY99 539 aa17.15■□□□□ 0.34
MRPL55-226ENST00000473066 LARSQ9P2J5 1176 aaKnown RBP17.15■□□□□ 0.34
MRPL55-226ENST00000473066 MTMR6Q9Y217 621 aa17.15■□□□□ 0.34
MRPL55-226ENST00000473066 CLIC4Q9Y696 253 aa17.15■□□□□ 0.34
MRPL55-226ENST00000473066 PDCD11Q14690 1871 aaKnown RBP17.14■□□□□ 0.33
MRPL55-226ENST00000473066 TTLL13PA6NNM8 815 aa17.14■□□□□ 0.33
MRPL55-226ENST00000473066 H0YCG3 227 aa17.14■□□□□ 0.33
MRPL55-226ENST00000473066 RECQL4O94761 1208 aa17.14■□□□□ 0.33
MRPL55-226ENST00000473066 PLS3P13797 630 aa17.14■□□□□ 0.33
MRPL55-226ENST00000473066 PLCG1P19174 1290 aa17.14■□□□□ 0.33
MRPL55-226ENST00000473066 SLC12A3P55017 1021 aa17.14■□□□□ 0.33
MRPL55-226ENST00000473066 CEBPZQ03701 1054 aaKnown RBP17.14■□□□□ 0.33
MRPL55-226ENST00000473066 DSC1Q08554 894 aa17.14■□□□□ 0.33
MRPL55-226ENST00000473066 COASYQ13057 564 aa17.14■□□□□ 0.33
MRPL55-226ENST00000473066 MAPK7Q13164 816 aa17.14■□□□□ 0.33
MRPL55-226ENST00000473066 DHX8Q14562 1220 aaKnown RBP17.14■□□□□ 0.33
MRPL55-226ENST00000473066 KARSQ15046 597 aaKnown RBP17.14■□□□□ 0.33
MRPL55-226ENST00000473066 SMAD2Q15796 467 aaKnown RBP17.14■□□□□ 0.33
MRPL55-226ENST00000473066 EEF1DP3Q658K8 133 aa17.14■□□□□ 0.33
MRPL55-226ENST00000473066 GJD3Q8N144 294 aa17.14■□□□□ 0.33
MRPL55-226ENST00000473066 SMRP1Q8NCR6 262 aa17.14■□□□□ 0.33
MRPL55-226ENST00000473066 EMILIN2Q9BXX0 1053 aa17.14■□□□□ 0.33
MRPL55-226ENST00000473066 CLEC1BQ9P126 229 aa17.14■□□□□ 0.33
MRPL55-226ENST00000473066 ARHGAP28Q9P2N2 729 aa17.14■□□□□ 0.33
MRPL55-226ENST00000473066 CCDC39Q9UFE4 941 aa17.14■□□□□ 0.33
MRPL55-226ENST00000473066 ODF2LQ9ULJ1 636 aa17.14■□□□□ 0.33
MRPL55-226ENST00000473066 SSX2IPQ9Y2D8 614 aa17.14■□□□□ 0.33
MRPL55-226ENST00000473066 SPDYE4A6NLX3 237 aa17.13■□□□□ 0.33
MRPL55-226ENST00000473066 SLC16A4O15374 487 aa17.13■□□□□ 0.33
MRPL55-226ENST00000473066 TBCAO75347 108 aaKnown RBP17.13■□□□□ 0.33
MRPL55-226ENST00000473066 FAM13AO94988 1023 aa17.13■□□□□ 0.33
MRPL55-226ENST00000473066 EDN1P05305 212 aa17.13■□□□□ 0.33
MRPL55-226ENST00000473066 MARCKSP29966 332 aaPredicted RBP17.13■□□□□ 0.33
MRPL55-226ENST00000473066 YARSP54577 528 aaKnown RBP17.13■□□□□ 0.33
MRPL55-226ENST00000473066 TPRNQ4KMQ1 711 aa17.13■□□□□ 0.33
MRPL55-226ENST00000473066 NT5DC1Q5TFE4 455 aa17.13■□□□□ 0.33
MRPL55-226ENST00000473066 ADHFE1Q8IWW8 467 aa17.13■□□□□ 0.33
MRPL55-226ENST00000473066 SPIRE2Q8WWL2 714 aa17.13■□□□□ 0.33
MRPL55-226ENST00000473066 AUTS2Q8WXX7 1259 aa17.13■□□□□ 0.33
MRPL55-226ENST00000473066 TCHPQ9BT92 498 aa17.13■□□□□ 0.33
MRPL55-226ENST00000473066 HERC2P3Q9BVR0 1158 aa17.13■□□□□ 0.33
MRPL55-226ENST00000473066 CCDC94Q9BW85 323 aaPredicted RBP17.13■□□□□ 0.33
MRPL55-226ENST00000473066 MRPL17Q9NRX2 175 aaKnown RBP17.13■□□□□ 0.33
MRPL55-226ENST00000473066 MIOSQ9NXC5 875 aa17.13■□□□□ 0.33
MRPL55-226ENST00000473066 TNFSF13BQ9Y275 285 aa17.13■□□□□ 0.33
MRPL55-226ENST00000473066 USP20Q9Y2K6 914 aa17.13■□□□□ 0.33
MRPL55-226ENST00000473066 GDAQ9Y2T3 454 aa17.13■□□□□ 0.33
MRPL55-226ENST00000473066 IRAK3Q9Y616 596 aa17.13■□□□□ 0.33
MRPL55-226ENST00000473066 SFI1A8K8P3 1242 aa17.12■□□□□ 0.33
MRPL55-226ENST00000473066 SOD2P04179 222 aa17.12■□□□□ 0.33
MRPL55-226ENST00000473066 THP07101 528 aa17.12■□□□□ 0.33
MRPL55-226ENST00000473066 PDIA4P13667 645 aaKnown RBP17.12■□□□□ 0.33
MRPL55-226ENST00000473066 HOXB8P17481 243 aaPredicted RBP17.12■□□□□ 0.33
MRPL55-226ENST00000473066 RBM10P98175 930 aaKnown RBP17.12■□□□□ 0.33
MRPL55-226ENST00000473066 GRIN1Q05586 938 aa17.12■□□□□ 0.33
MRPL55-226ENST00000473066 TUSC3Q13454 348 aa17.12■□□□□ 0.33
MRPL55-226ENST00000473066 STK38Q15208 465 aa17.12■□□□□ 0.33
MRPL55-226ENST00000473066 PTPAQ15257 358 aa17.12■□□□□ 0.33
MRPL55-226ENST00000473066 PTPN14Q15678 1187 aa17.12■□□□□ 0.33
MRPL55-226ENST00000473066 KIAA1841Q6NSI8 718 aa17.12■□□□□ 0.33
MRPL55-226ENST00000473066 ANKRD54Q6NXT1 300 aa17.12■□□□□ 0.33
MRPL55-226ENST00000473066 FAM173BQ6P4H8 233 aa17.12■□□□□ 0.33
MRPL55-226ENST00000473066 PPFIBP1Q86W92 1011 aa17.12■□□□□ 0.33
MRPL55-226ENST00000473066 VN1R2Q8NFZ6 395 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms