RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 EZH1Q92800 747 aaPredicted RBP10.88□□□□□ -0.67
APTX-216ENST00000472896 P2RX5Q93086 422 aa10.88□□□□□ -0.67
APTX-216ENST00000472896 PGM2Q96G03 612 aa10.88□□□□□ -0.67
APTX-216ENST00000472896 ZNF512BQ96KM6 892 aaPredicted RBP10.88□□□□□ -0.67
APTX-216ENST00000472896 CNOT6LQ96LI5 555 aaKnown RBP10.88□□□□□ -0.67
APTX-216ENST00000472896 PSMB7Q99436 277 aa10.88□□□□□ -0.67
APTX-216ENST00000472896 DUSP9Q99956 384 aaKnown RBP10.88□□□□□ -0.67
APTX-216ENST00000472896 SLITRK6Q9H5Y7 841 aa10.88□□□□□ -0.67
APTX-216ENST00000472896 ARHGEF3Q9NR81 526 aa10.88□□□□□ -0.67
APTX-216ENST00000472896 FBXL5Q9UKA1 691 aa10.88□□□□□ -0.67
APTX-216ENST00000472896 ASB3Q9Y575 518 aa10.88□□□□□ -0.67
APTX-216ENST00000472896 ZNF236Q9UL36 1845 aa10.88□□□□□ -0.67
APTX-216ENST00000472896 CDH23Q9H251 3354 aa10.88□□□□□ -0.67
APTX-216ENST00000472896 F8VZ95 297 aa10.88□□□□□ -0.67
APTX-216ENST00000472896 PRPF3O43395 683 aaKnown RBP10.88□□□□□ -0.67
APTX-216ENST00000472896 HIP1RO75146 1068 aa10.88□□□□□ -0.67
APTX-216ENST00000472896 FGFR1OPO95684 399 aaKnown RBP10.88□□□□□ -0.67
APTX-216ENST00000472896 TIMP1P01033 207 aa10.88□□□□□ -0.67
APTX-216ENST00000472896 PGK2P07205 417 aa10.88□□□□□ -0.67
APTX-216ENST00000472896 ZNF865P0CJ78 1059 aaPredicted RBP10.88□□□□□ -0.67
APTX-216ENST00000472896 RARAP10276 462 aa10.88□□□□□ -0.67
APTX-216ENST00000472896 RARBP10826 455 aa10.88□□□□□ -0.67
APTX-216ENST00000472896 STAT6P42226 847 aa10.88□□□□□ -0.67
APTX-216ENST00000472896 ABL2P42684 1182 aa10.88□□□□□ -0.67
APTX-216ENST00000472896 MMP13P45452 471 aa10.88□□□□□ -0.67
APTX-216ENST00000472896 COPS2P61201 443 aa10.88□□□□□ -0.67
APTX-216ENST00000472896 GABPAQ06546 454 aa10.88□□□□□ -0.67
APTX-216ENST00000472896 BNIP1Q12981 228 aa10.88□□□□□ -0.67
APTX-216ENST00000472896 CUL3Q13618 768 aa10.88□□□□□ -0.67
APTX-216ENST00000472896 MIIPQ5JXC2 388 aa10.88□□□□□ -0.67
APTX-216ENST00000472896 RASIP1Q5U651 963 aa10.88□□□□□ -0.67
APTX-216ENST00000472896 ANKRD33Q7Z3H0 272 aa10.88□□□□□ -0.67
APTX-216ENST00000472896 ABRAQ8N0Z2 381 aa10.88□□□□□ -0.67
APTX-216ENST00000472896 SLC44A5Q8NCS7 719 aa10.88□□□□□ -0.67
APTX-216ENST00000472896 TEKT4Q8WW24 435 aa10.88□□□□□ -0.67
APTX-216ENST00000472896 STAMQ92783 540 aa10.88□□□□□ -0.67
APTX-216ENST00000472896 ATG4CQ96DT6 458 aa10.88□□□□□ -0.67
APTX-216ENST00000472896 MTMR8Q96EF0 704 aa10.88□□□□□ -0.67
APTX-216ENST00000472896 UHRF1Q96T88 793 aaPredicted RBP10.88□□□□□ -0.67
APTX-216ENST00000472896 GORASP1Q9BQQ3 440 aa10.88□□□□□ -0.67
APTX-216ENST00000472896 TRIM7Q9C029 511 aa10.88□□□□□ -0.67
APTX-216ENST00000472896 TANGO6Q9C0B7 1094 aa10.88□□□□□ -0.67
APTX-216ENST00000472896 STMN4Q9H169 189 aaPredicted RBP10.88□□□□□ -0.67
APTX-216ENST00000472896 CUEDC2Q9H467 287 aa10.88□□□□□ -0.67
APTX-216ENST00000472896 MROH8Q9H579 483 aa10.88□□□□□ -0.67
APTX-216ENST00000472896 ECT2Q9H8V3 914 aa10.88□□□□□ -0.67
APTX-216ENST00000472896 INCENPQ9NQS7 918 aa10.88□□□□□ -0.67
APTX-216ENST00000472896 ZSWIM5Q9P217 1185 aa10.88□□□□□ -0.67
APTX-216ENST00000472896 THEGQ9P2T0 379 aa10.88□□□□□ -0.67
APTX-216ENST00000472896 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.88□□□□□ -0.67
APTX-216ENST00000472896 PLXNA1Q9UIW2 1896 aa10.87□□□□□ -0.67
APTX-216ENST00000472896 PPFIA2O75334 1257 aa10.87□□□□□ -0.67
APTX-216ENST00000472896 MMEP08473 750 aa10.87□□□□□ -0.67
APTX-216ENST00000472896 MSH2P43246 934 aa10.87□□□□□ -0.67
APTX-216ENST00000472896 PDE6CP51160 858 aa10.87□□□□□ -0.67
APTX-216ENST00000472896 PMS1P54277 932 aaKnown RBP10.87□□□□□ -0.67
APTX-216ENST00000472896 PTGDRQ13258 359 aa10.87□□□□□ -0.67
APTX-216ENST00000472896 SNX1Q13596 522 aa10.87□□□□□ -0.67
APTX-216ENST00000472896 TMEM132BQ14DG7 1078 aa10.87□□□□□ -0.67
APTX-216ENST00000472896 ZNF174Q15697 407 aa10.87□□□□□ -0.67
APTX-216ENST00000472896 PDXDC1Q6P996 788 aa10.87□□□□□ -0.67
APTX-216ENST00000472896 TMC3Q7Z5M5 1100 aa10.87□□□□□ -0.67
APTX-216ENST00000472896 RNF180Q86T96 592 aa10.87□□□□□ -0.67
APTX-216ENST00000472896 SESTD1Q86VW0 696 aa10.87□□□□□ -0.67
APTX-216ENST00000472896 STAG2Q8N3U4 1231 aa10.87□□□□□ -0.67
APTX-216ENST00000472896 MAGEB6Q8N7X4 407 aa10.87□□□□□ -0.67
APTX-216ENST00000472896 FANCBQ8NB91 859 aa10.87□□□□□ -0.67
APTX-216ENST00000472896 FBF1Q8TES7 1133 aa10.87□□□□□ -0.67
APTX-216ENST00000472896 SEC14L1Q92503 715 aa10.87□□□□□ -0.67
APTX-216ENST00000472896 TNFRSF25Q93038 417 aa10.87□□□□□ -0.67
APTX-216ENST00000472896 KLHL29Q96CT2 875 aa10.87□□□□□ -0.67
APTX-216ENST00000472896 TOX2Q96NM4 488 aa10.87□□□□□ -0.67
APTX-216ENST00000472896 TRAPPC9Q96Q05 1148 aa10.87□□□□□ -0.67
APTX-216ENST00000472896 GAS2L1Q99501 681 aaPredicted RBP10.87□□□□□ -0.67
APTX-216ENST00000472896 VCXQ9H320 206 aa10.87□□□□□ -0.67
APTX-216ENST00000472896 WDR35Q9P2L0 1181 aa10.87□□□□□ -0.67
APTX-216ENST00000472896 TBX21Q9UL17 535 aa10.87□□□□□ -0.67
APTX-216ENST00000472896 SIK3Q9Y2K2 1263 aa10.87□□□□□ -0.67
APTX-216ENST00000472896 TCF20Q9UGU0 1960 aaKnown RBP10.86□□□□□ -0.67
APTX-216ENST00000472896 SPDYE3A6NKU9 549 aa10.86□□□□□ -0.67
APTX-216ENST00000472896 CCDC169A6NNP5 214 aa10.86□□□□□ -0.67
APTX-216ENST00000472896 DCDC2CA8MYV0 355 aa10.86□□□□□ -0.67
APTX-216ENST00000472896 KLRC4O43908 158 aa10.86□□□□□ -0.67
APTX-216ENST00000472896 ADAMTS4O75173 837 aa10.86□□□□□ -0.67
APTX-216ENST00000472896 PALMO75781 387 aa10.86□□□□□ -0.67
APTX-216ENST00000472896 RNF8O76064 485 aa10.86□□□□□ -0.67
APTX-216ENST00000472896 OAS1P00973 400 aaKnown RBP10.86□□□□□ -0.67
APTX-216ENST00000472896 PLEKP08567 350 aaPredicted RBP10.86□□□□□ -0.67
APTX-216ENST00000472896 NUDT17P0C025 328 aa10.86□□□□□ -0.67
APTX-216ENST00000472896 ACRP10323 421 aa10.86□□□□□ -0.67
APTX-216ENST00000472896 IMPDH2P12268 514 aa10.86□□□□□ -0.67
APTX-216ENST00000472896 FCER1AP12319 257 aa10.86□□□□□ -0.67
APTX-216ENST00000472896 CHN1P15882 459 aa10.86□□□□□ -0.67
APTX-216ENST00000472896 ATP6V1C1P21283 382 aa10.86□□□□□ -0.67
APTX-216ENST00000472896 IGFBP4P22692 258 aa10.86□□□□□ -0.67
APTX-216ENST00000472896 KLK7P49862 253 aa10.86□□□□□ -0.67
APTX-216ENST00000472896 ZNF792Q3KQV3 632 aa10.86□□□□□ -0.67
APTX-216ENST00000472896 VWA3BQ502W6 1294 aa10.86□□□□□ -0.67
APTX-216ENST00000472896 FAM133BQ5BKY9 247 aaKnown RBP10.86□□□□□ -0.67
APTX-216ENST00000472896 CCSAPQ6IQ19 270 aaPredicted RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms