RNA–Protein interactions for RNA: ENST00000472729.1

COMMD1-208, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 629 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-208ENST00000472729 NPTX2P47972 431 aa21.4■■□□□ 1.02
COMMD1-208ENST00000472729 RAD51AP2Q09MP3 1159 aa21.4■■□□□ 1.02
COMMD1-208ENST00000472729 TPRNQ4KMQ1 711 aa21.4■■□□□ 1.02
COMMD1-208ENST00000472729 C1orf186Q6ZWK4 172 aa21.4■■□□□ 1.02
COMMD1-208ENST00000472729 TMEM173Q86WV6 379 aaPredicted RBP21.4■■□□□ 1.02
COMMD1-208ENST00000472729 HSCBQ8IWL3 235 aa21.4■■□□□ 1.02
COMMD1-208ENST00000472729 MSLNLQ96KJ4 702 aa21.4■■□□□ 1.02
COMMD1-208ENST00000472729 RUSC1Q9BVN2 902 aa21.4■■□□□ 1.02
COMMD1-208ENST00000472729 MRPL17Q9NRX2 175 aaKnown RBP21.4■■□□□ 1.02
COMMD1-208ENST00000472729 NLRC5Q86WI3 1866 aa21.4■■□□□ 1.02
COMMD1-208ENST00000472729 SPTBN5Q9NRC6 3674 aaKnown RBP21.4■■□□□ 1.02
COMMD1-208ENST00000472729 URODP06132 367 aa21.39■■□□□ 1.01
COMMD1-208ENST00000472729 GUCY2CP25092 1073 aa21.39■■□□□ 1.01
COMMD1-208ENST00000472729 YARSP54577 528 aaKnown RBP21.39■■□□□ 1.01
COMMD1-208ENST00000472729 GRIK3Q13003 919 aa21.39■■□□□ 1.01
COMMD1-208ENST00000472729 HYIQ5T013 277 aa21.39■■□□□ 1.01
COMMD1-208ENST00000472729 CES5AQ6NT32 575 aa21.39■■□□□ 1.01
COMMD1-208ENST00000472729 PPFIBP1Q86W92 1011 aa21.39■■□□□ 1.01
COMMD1-208ENST00000472729 SYT2Q8N9I0 419 aaPredicted RBP21.39■■□□□ 1.01
COMMD1-208ENST00000472729 SMRP1Q8NCR6 262 aa21.39■■□□□ 1.01
COMMD1-208ENST00000472729 MRPL4Q9BYD3 311 aaKnown RBP21.39■■□□□ 1.01
COMMD1-208ENST00000472729 CCDC113Q9H0I3 377 aa21.39■■□□□ 1.01
COMMD1-208ENST00000472729 ZBP1Q9H171 429 aa21.39■■□□□ 1.01
COMMD1-208ENST00000472729 SNTG2Q9NY99 539 aa21.39■■□□□ 1.01
COMMD1-208ENST00000472729 WDR81Q562E7 1941 aa21.39■■□□□ 1.01
COMMD1-208ENST00000472729 SFI1A8K8P3 1242 aa21.38■■□□□ 1.01
COMMD1-208ENST00000472729 H0YCG3 227 aa21.38■■□□□ 1.01
COMMD1-208ENST00000472729 INPPL1O15357 1258 aa21.38■■□□□ 1.01
COMMD1-208ENST00000472729 KLRC2P26717 231 aa21.38■■□□□ 1.01
COMMD1-208ENST00000472729 TXLNAP40222 546 aa21.38■■□□□ 1.01
COMMD1-208ENST00000472729 DHX8Q14562 1220 aaKnown RBP21.38■■□□□ 1.01
COMMD1-208ENST00000472729 ANKRD54Q6NXT1 300 aa21.38■■□□□ 1.01
COMMD1-208ENST00000472729 ELMSAN1Q6PJG2 1045 aa21.38■■□□□ 1.01
COMMD1-208ENST00000472729 KCNK18Q7Z418 384 aa21.38■■□□□ 1.01
COMMD1-208ENST00000472729 COLGALT2Q8IYK4 626 aa21.38■■□□□ 1.01
COMMD1-208ENST00000472729 AUTS2Q8WXX7 1259 aa21.38■■□□□ 1.01
COMMD1-208ENST00000472729 ZSCAN16Q9H4T2 348 aaPredicted RBP21.38■■□□□ 1.01
COMMD1-208ENST00000472729 TMEM134Q9H6X4 195 aa21.38■■□□□ 1.01
COMMD1-208ENST00000472729 LARSQ9P2J5 1176 aaKnown RBP21.38■■□□□ 1.01
COMMD1-208ENST00000472729 CLASP2O75122 1294 aaKnown RBP21.37■■□□□ 1.01
COMMD1-208ENST00000472729 TADA2AO75478 443 aa21.37■■□□□ 1.01
COMMD1-208ENST00000472729 GLP2RO95838 553 aa21.37■■□□□ 1.01
COMMD1-208ENST00000472729 THP07101 528 aa21.37■■□□□ 1.01
COMMD1-208ENST00000472729 ALADP13716 330 aa21.37■■□□□ 1.01
COMMD1-208ENST00000472729 PLS3P13797 630 aa21.37■■□□□ 1.01
COMMD1-208ENST00000472729 RBM10P98175 930 aaKnown RBP21.37■■□□□ 1.01
COMMD1-208ENST00000472729 CEBPZQ03701 1054 aaKnown RBP21.37■■□□□ 1.01
COMMD1-208ENST00000472729 ZP2Q05996 745 aa21.37■■□□□ 1.01
COMMD1-208ENST00000472729 TMEM184AQ6ZMB5 413 aa21.37■■□□□ 1.01
COMMD1-208ENST00000472729 PNMA5Q96PV4 448 aa21.37■■□□□ 1.01
COMMD1-208ENST00000472729 TOPORSQ9NS56 1045 aaPredicted RBP21.37■■□□□ 1.01
COMMD1-208ENST00000472729 CCDC39Q9UFE4 941 aa21.37■■□□□ 1.01
COMMD1-208ENST00000472729 USP20Q9Y2K6 914 aa21.37■■□□□ 1.01
COMMD1-208ENST00000472729 GDAQ9Y2T3 454 aa21.37■■□□□ 1.01
COMMD1-208ENST00000472729 USP15Q9Y4E8 981 aaPredicted RBP21.37■■□□□ 1.01
COMMD1-208ENST00000472729 HCFC2Q9Y5Z7 792 aa21.37■■□□□ 1.01
COMMD1-208ENST00000472729 IRAK3Q9Y616 596 aa21.37■■□□□ 1.01
COMMD1-208ENST00000472729 ZMYM2Q9UBW7 1377 aa21.36■■□□□ 1.01
COMMD1-208ENST00000472729 C2CD2LO14523 706 aa21.36■■□□□ 1.01
COMMD1-208ENST00000472729 SLC16A4O15374 487 aa21.36■■□□□ 1.01
COMMD1-208ENST00000472729 STX6O43752 255 aa21.36■■□□□ 1.01
COMMD1-208ENST00000472729 SOD2P04179 222 aa21.36■■□□□ 1.01
COMMD1-208ENST00000472729 ZNF568Q3ZCX4 644 aa21.36■■□□□ 1.01
COMMD1-208ENST00000472729 BCL7CQ8WUZ0 217 aaPredicted RBP21.36■■□□□ 1.01
COMMD1-208ENST00000472729 CCDC94Q9BW85 323 aaPredicted RBP21.36■■□□□ 1.01
COMMD1-208ENST00000472729 APOL5Q9BWW9 433 aa21.36■■□□□ 1.01
COMMD1-208ENST00000472729 ZHX3Q9H4I2 956 aa21.36■■□□□ 1.01
COMMD1-208ENST00000472729 DZANK1Q9NVP4 752 aa21.36■■□□□ 1.01
COMMD1-208ENST00000472729 MIOSQ9NXC5 875 aa21.36■■□□□ 1.01
COMMD1-208ENST00000472729 DPP7Q9UHL4 492 aa21.36■■□□□ 1.01
COMMD1-208ENST00000472729 TNFSF13BQ9Y275 285 aa21.36■■□□□ 1.01
COMMD1-208ENST00000472729 FNDC1Q4ZHG4 1894 aaPredicted RBP21.35■■□□□ 1.01
COMMD1-208ENST00000472729 TTLL13PA6NNM8 815 aa21.35■■□□□ 1.01
COMMD1-208ENST00000472729 B4GALT3O60512 393 aa21.35■■□□□ 1.01
COMMD1-208ENST00000472729 RECQL4O94761 1208 aa21.35■■□□□ 1.01
COMMD1-208ENST00000472729 MATR3P43243 847 aaKnown RBP eCLIP21.35■■□□□ 1.016e-6■■□□□ 12.4
COMMD1-208ENST00000472729 SLC12A3P55017 1021 aa21.35■■□□□ 1.01
COMMD1-208ENST00000472729 DSC1Q08554 894 aa21.35■■□□□ 1.01
COMMD1-208ENST00000472729 TMEM119Q4V9L6 283 aa21.35■■□□□ 1.01
COMMD1-208ENST00000472729 NT5DC1Q5TFE4 455 aa21.35■■□□□ 1.01
COMMD1-208ENST00000472729 GPBP1Q86WP2 473 aa21.35■■□□□ 1.01
COMMD1-208ENST00000472729 VN1R2Q8NFZ6 395 aa21.35■■□□□ 1.01
COMMD1-208ENST00000472729 SPIRE2Q8WWL2 714 aa21.35■■□□□ 1.01
COMMD1-208ENST00000472729 CLIC4Q9Y696 253 aa21.35■■□□□ 1.01
COMMD1-208ENST00000472729 TBCAO75347 108 aaKnown RBP21.34■■□□□ 1.01
COMMD1-208ENST00000472729 FAM13AO94988 1023 aa21.34■■□□□ 1.01
COMMD1-208ENST00000472729 PDIA4P13667 645 aaKnown RBP21.34■■□□□ 1.01
COMMD1-208ENST00000472729 MARCKSP29966 332 aaPredicted RBP21.34■■□□□ 1.01
COMMD1-208ENST00000472729 GLUD2P49448 558 aa21.34■■□□□ 1.01
COMMD1-208ENST00000472729 ITIH3Q06033 890 aa21.34■■□□□ 1.01
COMMD1-208ENST00000472729 TUSC3Q13454 348 aa21.34■■□□□ 1.01
COMMD1-208ENST00000472729 KARSQ15046 597 aaKnown RBP21.34■■□□□ 1.01
COMMD1-208ENST00000472729 PTPN14Q15678 1187 aa21.34■■□□□ 1.01
COMMD1-208ENST00000472729 ZBTB33Q86T24 672 aa21.34■■□□□ 1.01
COMMD1-208ENST00000472729 DAW1Q8N136 415 aa21.34■■□□□ 1.01
COMMD1-208ENST00000472729 SNX21Q969T3 373 aa21.34■■□□□ 1.01
COMMD1-208ENST00000472729 BICD1Q96G01 975 aa21.34■■□□□ 1.01
COMMD1-208ENST00000472729 NTPCRQ9BSD7 190 aaKnown RBP21.34■■□□□ 1.01
COMMD1-208ENST00000472729 PHF7Q9BWX1 381 aaPredicted RBP21.34■■□□□ 1.01
COMMD1-208ENST00000472729 ARHGAP28Q9P2N2 729 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms