RNA–Protein interactions for RNA: ENST00000472725.5

SF1-213, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-213ENST00000472725 KIAA0391O15091 583 aaKnown RBP21.86■■□□□ 1.09
SF1-213ENST00000472725 INPPL1O15357 1258 aa21.86■■□□□ 1.09
SF1-213ENST00000472725 POU5F1Q01860 360 aaKnown RBP21.86■■□□□ 1.09
SF1-213ENST00000472725 STK4Q13043 487 aa21.86■■□□□ 1.09
SF1-213ENST00000472725 GPR153Q6NV75 609 aa21.86■■□□□ 1.09
SF1-213ENST00000472725 GLB1LQ6UWU2 654 aa21.86■■□□□ 1.09
SF1-213ENST00000472725 CDR2LQ86X02 465 aaPredicted RBP21.86■■□□□ 1.09
SF1-213ENST00000472725 SCFD1Q8WVM8 642 aa21.86■■□□□ 1.09
SF1-213ENST00000472725 HPS3Q969F9 1004 aa21.86■■□□□ 1.09
SF1-213ENST00000472725 MRPL9Q9BYD2 267 aaKnown RBP21.86■■□□□ 1.09
SF1-213ENST00000472725 FGFBP2Q9BYJ0 223 aa21.86■■□□□ 1.09
SF1-213ENST00000472725 PBX4Q9BYU1 374 aa21.86■■□□□ 1.09
SF1-213ENST00000472725 RSAD1Q9HA92 442 aa21.86■■□□□ 1.09
SF1-213ENST00000472725 KANSL3Q9P2N6 904 aa21.86■■□□□ 1.09
SF1-213ENST00000472725 CARNS1A5YM72 827 aa21.85■■□□□ 1.09
SF1-213ENST00000472725 GRXCR1A8MXD5 290 aa21.85■■□□□ 1.09
SF1-213ENST00000472725 PRPF6O94906 941 aaKnown RBP21.85■■□□□ 1.09
SF1-213ENST00000472725 GARTP22102 1010 aa21.85■■□□□ 1.09
SF1-213ENST00000472725 GRM5P41594 1212 aa21.85■■□□□ 1.09
SF1-213ENST00000472725 HSP90AA2PQ14568 343 aaPredicted RBP21.85■■□□□ 1.09
SF1-213ENST00000472725 COBLL1Q53SF7 1204 aa21.85■■□□□ 1.09
SF1-213ENST00000472725 FAM117BQ6P1L5 589 aa21.85■■□□□ 1.09
SF1-213ENST00000472725 AGMOQ6ZNB7 445 aa21.85■■□□□ 1.09
SF1-213ENST00000472725 KIAA0895Q8NCT3 520 aa21.85■■□□□ 1.09
SF1-213ENST00000472725 CCDC94Q9BW85 323 aaPredicted RBP21.85■■□□□ 1.09
SF1-213ENST00000472725 GBP3Q9H0R5 595 aa21.85■■□□□ 1.09
SF1-213ENST00000472725 CLSTN2Q9H4D0 955 aa21.85■■□□□ 1.09
SF1-213ENST00000472725 RNF19AQ9NV58 838 aa21.85■■□□□ 1.09
SF1-213ENST00000472725 ANKFY1Q9P2R3 1169 aa21.85■■□□□ 1.09
SF1-213ENST00000472725 USP20Q9Y2K6 914 aa21.85■■□□□ 1.09
SF1-213ENST00000472725 A0A0B4J269 797 aa21.84■■□□□ 1.09
SF1-213ENST00000472725 PPP1R2P41236 205 aa21.84■■□□□ 1.09
SF1-213ENST00000472725 RABGGTBP53611 331 aa21.84■■□□□ 1.09
SF1-213ENST00000472725 KCNA1Q09470 495 aa21.84■■□□□ 1.09
SF1-213ENST00000472725 KNOP1Q1ED39 458 aaKnown RBP21.84■■□□□ 1.09
SF1-213ENST00000472725 ZNF658Q5TYW1 1059 aaPredicted RBP21.84■■□□□ 1.09
SF1-213ENST00000472725 TMCO2Q7Z6W1 182 aaPredicted RBP21.84■■□□□ 1.09
SF1-213ENST00000472725 TRIML1Q8N9V2 468 aa21.84■■□□□ 1.09
SF1-213ENST00000472725 RNF169Q8NCN4 708 aa21.84■■□□□ 1.09
SF1-213ENST00000472725 GOLGA5Q8TBA6 731 aa21.84■■□□□ 1.09
SF1-213ENST00000472725 NXF3Q9H4D5 531 aaKnown RBP21.84■■□□□ 1.09
SF1-213ENST00000472725 TOPORSQ9NS56 1045 aaPredicted RBP21.84■■□□□ 1.09
SF1-213ENST00000472725 RWDD3Q9Y3V2 267 aa21.84■■□□□ 1.09
SF1-213ENST00000472725 TRIOBPQ9H2D6 2365 aa21.83■■□□□ 1.09
SF1-213ENST00000472725 OGTO15294 1046 aa21.83■■□□□ 1.09
SF1-213ENST00000472725 OFD1O75665 1012 aa21.83■■□□□ 1.09
SF1-213ENST00000472725 LDHAP00338 332 aaKnown RBP21.83■■□□□ 1.09
SF1-213ENST00000472725 FGFR1P11362 822 aa21.83■■□□□ 1.09
SF1-213ENST00000472725 DNAJB2P25686 324 aa21.83■■□□□ 1.09
SF1-213ENST00000472725 MATR3P43243 847 aaKnown RBP eCLIP21.83■■□□□ 1.09
SF1-213ENST00000472725 BTG3Q14201 252 aaPredicted RBP21.83■■□□□ 1.09
SF1-213ENST00000472725 CLLU1OSQ5K130 101 aa21.83■■□□□ 1.09
SF1-213ENST00000472725 SLC39A4Q6P5W5 647 aa21.83■■□□□ 1.09
SF1-213ENST00000472725 HS2ST1Q7LGA3 356 aa21.83■■□□□ 1.09
SF1-213ENST00000472725 GUF1Q8N442 669 aaKnown RBP21.83■■□□□ 1.09
SF1-213ENST00000472725 FIBCD1Q8N539 461 aa21.83■■□□□ 1.09
SF1-213ENST00000472725 GLIS3Q8NEA6 775 aa21.83■■□□□ 1.09
SF1-213ENST00000472725 URGCPQ8TCY9 931 aa21.83■■□□□ 1.09
SF1-213ENST00000472725 TMEM174Q8WUU8 243 aa21.83■■□□□ 1.09
SF1-213ENST00000472725 ZBTB45Q96K62 511 aaPredicted RBP21.83■■□□□ 1.09
SF1-213ENST00000472725 SAMD11Q96NU1 681 aa21.83■■□□□ 1.09
SF1-213ENST00000472725 CASD1Q96PB1 797 aa21.83■■□□□ 1.09
SF1-213ENST00000472725 NUP62CLQ9H1M0 184 aa21.83■■□□□ 1.09
SF1-213ENST00000472725 KIAA1468Q9P260 1216 aa21.83■■□□□ 1.09
SF1-213ENST00000472725 ANKRD63C9JTQ0 380 aa21.82■■□□□ 1.08
SF1-213ENST00000472725 RBAK-RBAKDNI3L0D1 243 aa21.82■■□□□ 1.08
SF1-213ENST00000472725 HOXD13P35453 343 aa21.82■■□□□ 1.08
SF1-213ENST00000472725 YARSP54577 528 aaKnown RBP21.82■■□□□ 1.08
SF1-213ENST00000472725 NOMO2Q5JPE7 1267 aa21.82■■□□□ 1.08
SF1-213ENST00000472725 ZBTB33Q86T24 672 aa21.82■■□□□ 1.08
SF1-213ENST00000472725 LRRC43Q8N309 656 aa21.82■■□□□ 1.08
SF1-213ENST00000472725 GPT2Q8TD30 523 aa21.82■■□□□ 1.08
SF1-213ENST00000472725 POMGNT1Q8WZA1 660 aa21.82■■□□□ 1.08
SF1-213ENST00000472725 LPPQ93052 612 aa21.82■■□□□ 1.08
SF1-213ENST00000472725 TIFAQ96CG3 184 aa21.82■■□□□ 1.08
SF1-213ENST00000472725 ACAP3Q96P50 834 aa21.82■■□□□ 1.08
SF1-213ENST00000472725 TSPAN18Q96SJ8 248 aa21.82■■□□□ 1.08
SF1-213ENST00000472725 MSTO1Q9BUK6 570 aa21.82■■□□□ 1.08
SF1-213ENST00000472725 SLC28A3Q9HAS3 691 aa21.82■■□□□ 1.08
SF1-213ENST00000472725 YBX2Q9Y2T7 364 aaKnown RBP21.82■■□□□ 1.08
SF1-213ENST00000472725 HES2Q9Y543 173 aa21.82■■□□□ 1.08
SF1-213ENST00000472725 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.82■■□□□ 1.08
SF1-213ENST00000472725 CITO14578 2027 aa21.81■■□□□ 1.08
SF1-213ENST00000472725 TBKBP1A7MCY6 615 aa21.81■■□□□ 1.08
SF1-213ENST00000472725 CLTAP09496 248 aa21.81■■□□□ 1.08
SF1-213ENST00000472725 IBSPP21815 317 aaPredicted RBP21.81■■□□□ 1.08
SF1-213ENST00000472725 PBX2P40425 430 aa21.81■■□□□ 1.08
SF1-213ENST00000472725 C12orf56Q8IXR9 622 aa21.81■■□□□ 1.08
SF1-213ENST00000472725 HELQQ8TDG4 1101 aa21.81■■□□□ 1.08
SF1-213ENST00000472725 CLP1Q92989 425 aaKnown RBP21.81■■□□□ 1.08
SF1-213ENST00000472725 HAPLN2Q9GZV7 340 aa21.81■■□□□ 1.08
SF1-213ENST00000472725 RNF39Q9H2S5 420 aa21.81■■□□□ 1.08
SF1-213ENST00000472725 PLEKHA5Q9HAU0 1116 aa21.81■■□□□ 1.08
SF1-213ENST00000472725 SNTG2Q9NY99 539 aa21.81■■□□□ 1.08
SF1-213ENST00000472725 PARP2Q9UGN5 583 aa21.81■■□□□ 1.08
SF1-213ENST00000472725 AGO2Q9UKV8 859 aaKnown RBP21.81■■□□□ 1.08
SF1-213ENST00000472725 RALGAPA2Q2PPJ7 1873 aa21.81■■□□□ 1.08
SF1-213ENST00000472725 RANBP2P49792 3224 aaKnown RBP21.81■■□□□ 1.08
SF1-213ENST00000472725 PDXKO00764 312 aa21.8■■□□□ 1.08
SF1-213ENST00000472725 TGFB1I1O43294 461 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms