RNA–Protein interactions for RNA: ENST00000472610.5

COMMD3-210, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 428 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-210ENST00000472610 CXCL14O95715 111 aa18.76■□□□□ 0.59
COMMD3-210ENST00000472610 PLS3P13797 630 aa18.76■□□□□ 0.59
COMMD3-210ENST00000472610 SCNN1GP51170 649 aa18.76■□□□□ 0.59
COMMD3-210ENST00000472610 GRIN1Q05586 938 aa18.76■□□□□ 0.59
COMMD3-210ENST00000472610 ATF7IP2Q5U623 682 aa18.76■□□□□ 0.59
COMMD3-210ENST00000472610 TMEM173Q86WV6 379 aaPredicted RBP18.76■□□□□ 0.59
COMMD3-210ENST00000472610 SPIRE2Q8WWL2 714 aa18.76■□□□□ 0.59
COMMD3-210ENST00000472610 ZFP42Q96MM3 310 aa18.76■□□□□ 0.59
COMMD3-210ENST00000472610 RPS6KC1Q96S38 1066 aa18.76■□□□□ 0.59
COMMD3-210ENST00000472610 ZBP1Q9H171 429 aa18.76■□□□□ 0.59
COMMD3-210ENST00000472610 MIOSQ9NXC5 875 aa18.76■□□□□ 0.59
COMMD3-210ENST00000472610 LARSQ9P2J5 1176 aaKnown RBP18.76■□□□□ 0.59
COMMD3-210ENST00000472610 ODF2LQ9ULJ1 636 aa18.76■□□□□ 0.59
COMMD3-210ENST00000472610 TNFSF13BQ9Y275 285 aa18.76■□□□□ 0.59
COMMD3-210ENST00000472610 IRAK3Q9Y616 596 aa18.76■□□□□ 0.59
COMMD3-210ENST00000472610 C2orf71A6NGG8 1288 aa18.75■□□□□ 0.59
COMMD3-210ENST00000472610 SFI1A8K8P3 1242 aa18.75■□□□□ 0.59
COMMD3-210ENST00000472610 HIDE1A8MVS5 230 aa18.75■□□□□ 0.59
COMMD3-210ENST00000472610 B4GALT3O60512 393 aa18.75■□□□□ 0.59
COMMD3-210ENST00000472610 CTSAP10619 480 aa18.75■□□□□ 0.59
COMMD3-210ENST00000472610 IL9P15248 144 aa18.75■□□□□ 0.59
COMMD3-210ENST00000472610 MARCKSP29966 332 aaPredicted RBP18.75■□□□□ 0.59
COMMD3-210ENST00000472610 OR1G1P47890 313 aa18.75■□□□□ 0.59
COMMD3-210ENST00000472610 DSC1Q08554 894 aa18.75■□□□□ 0.59
COMMD3-210ENST00000472610 GRIK3Q13003 919 aa18.75■□□□□ 0.59
COMMD3-210ENST00000472610 COASYQ13057 564 aa18.75■□□□□ 0.59
COMMD3-210ENST00000472610 NT5DC1Q5TFE4 455 aa18.75■□□□□ 0.59
COMMD3-210ENST00000472610 FAM173BQ6P4H8 233 aa18.75■□□□□ 0.59
COMMD3-210ENST00000472610 TMEM184AQ6ZMB5 413 aa18.75■□□□□ 0.59
COMMD3-210ENST00000472610 FAM178BQ8IXR5 827 aa18.75■□□□□ 0.59
COMMD3-210ENST00000472610 TMEM87AQ8NBN3 555 aa18.75■□□□□ 0.59
COMMD3-210ENST00000472610 MSLNLQ96KJ4 702 aa18.75■□□□□ 0.59
COMMD3-210ENST00000472610 NECAB3Q96P71 396 aaPredicted RBP18.75■□□□□ 0.59
COMMD3-210ENST00000472610 COLEC11Q9BWP8 271 aa18.75■□□□□ 0.59
COMMD3-210ENST00000472610 MRPL4Q9BYD3 311 aaKnown RBP18.75■□□□□ 0.59
COMMD3-210ENST00000472610 SNTG2Q9NY99 539 aa18.75■□□□□ 0.59
COMMD3-210ENST00000472610 CLEC1BQ9P126 229 aa18.75■□□□□ 0.59
COMMD3-210ENST00000472610 CCDC39Q9UFE4 941 aa18.75■□□□□ 0.59
COMMD3-210ENST00000472610 PRKAG3Q9UGI9 489 aa18.75■□□□□ 0.59
COMMD3-210ENST00000472610 FBXO2Q9UK22 296 aaPredicted RBP18.75■□□□□ 0.59
COMMD3-210ENST00000472610 CUL9Q8IWT3 2517 aa18.75■□□□□ 0.59
COMMD3-210ENST00000472610 H0YCG3 227 aa18.74■□□□□ 0.59
COMMD3-210ENST00000472610 MBTPS2O43462 519 aa18.74■□□□□ 0.59
COMMD3-210ENST00000472610 GLP2RO95838 553 aa18.74■□□□□ 0.59
COMMD3-210ENST00000472610 EDN1P05305 212 aa18.74■□□□□ 0.59
COMMD3-210ENST00000472610 PLCG1P19174 1290 aa18.74■□□□□ 0.59
COMMD3-210ENST00000472610 CA8P35219 290 aa18.74■□□□□ 0.59
COMMD3-210ENST00000472610 TXLNAP40222 546 aa18.74■□□□□ 0.59
COMMD3-210ENST00000472610 CEBPZQ03701 1054 aaKnown RBP18.74■□□□□ 0.59
COMMD3-210ENST00000472610 RAD51AP2Q09MP3 1159 aa18.74■□□□□ 0.59
COMMD3-210ENST00000472610 STRN3Q13033 797 aa18.74■□□□□ 0.59
COMMD3-210ENST00000472610 SMAD4Q13485 552 aaKnown RBP18.74■□□□□ 0.59
COMMD3-210ENST00000472610 SLC39A14Q15043 492 aa18.74■□□□□ 0.59
COMMD3-210ENST00000472610 KARSQ15046 597 aaKnown RBP18.74■□□□□ 0.59
COMMD3-210ENST00000472610 ARSHQ5FYA8 562 aa18.74■□□□□ 0.59
COMMD3-210ENST00000472610 EEF1DP3Q658K8 133 aa18.74■□□□□ 0.59
COMMD3-210ENST00000472610 GSTCDQ8NEC7 633 aa18.74■□□□□ 0.59
COMMD3-210ENST00000472610 BCL7CQ8WUZ0 217 aaPredicted RBP18.74■□□□□ 0.59
COMMD3-210ENST00000472610 RAD54LQ92698 747 aa18.74■□□□□ 0.59
COMMD3-210ENST00000472610 USP28Q96RU2 1077 aa18.74■□□□□ 0.59
COMMD3-210ENST00000472610 ACO2Q99798 780 aaKnown RBP18.74■□□□□ 0.59
COMMD3-210ENST00000472610 BLOC1S4Q9NUP1 217 aa18.74■□□□□ 0.59
COMMD3-210ENST00000472610 KLK14Q9P0G3 267 aa18.74■□□□□ 0.59
COMMD3-210ENST00000472610 USP20Q9Y2K6 914 aa18.74■□□□□ 0.59
COMMD3-210ENST00000472610 XIRP2A4UGR9 3374 aa18.73■□□□□ 0.59
COMMD3-210ENST00000472610 SLC16A4O15374 487 aa18.73■□□□□ 0.59
COMMD3-210ENST00000472610 SCP2P22307 547 aa18.73■□□□□ 0.59
COMMD3-210ENST00000472610 DDIT3P35638 169 aa18.73■□□□□ 0.59
COMMD3-210ENST00000472610 KCNC3Q14003 757 aa18.73■□□□□ 0.59
COMMD3-210ENST00000472610 DHX8Q14562 1220 aaKnown RBP18.73■□□□□ 0.59
COMMD3-210ENST00000472610 SMAD2Q15796 467 aaKnown RBP18.73■□□□□ 0.59
COMMD3-210ENST00000472610 CLUL1Q15846 466 aa18.73■□□□□ 0.59
COMMD3-210ENST00000472610 GPBP1Q86WP2 473 aa18.73■□□□□ 0.59
COMMD3-210ENST00000472610 LARP4BQ92615 738 aaKnown RBP18.73■□□□□ 0.59
COMMD3-210ENST00000472610 EPSTI1Q96J88 318 aa18.73■□□□□ 0.59
COMMD3-210ENST00000472610 ZNF396Q96N95 335 aaPredicted RBP18.73■□□□□ 0.59
COMMD3-210ENST00000472610 BARX2Q9UMQ3 279 aaPredicted RBP18.73■□□□□ 0.59
COMMD3-210ENST00000472610 SSX2IPQ9Y2D8 614 aa18.73■□□□□ 0.59
COMMD3-210ENST00000472610 MYH15Q9Y2K3 1946 aa18.72■□□□□ 0.59
COMMD3-210ENST00000472610 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.72■□□□□ 0.59
COMMD3-210ENST00000472610 RECQL4O94761 1208 aa18.72■□□□□ 0.59
COMMD3-210ENST00000472610 THP07101 528 aa18.72■□□□□ 0.59
COMMD3-210ENST00000472610 MCM6Q14566 821 aa18.72■□□□□ 0.59
COMMD3-210ENST00000472610 TAS1R3Q7RTX0 852 aa18.72■□□□□ 0.59
COMMD3-210ENST00000472610 KRI1Q8N9T8 703 aaKnown RBP18.72■□□□□ 0.59
COMMD3-210ENST00000472610 SMRP1Q8NCR6 262 aa18.72■□□□□ 0.59
COMMD3-210ENST00000472610 TMEM161BQ8NDZ6 487 aa18.72■□□□□ 0.59
COMMD3-210ENST00000472610 CASP10Q92851 521 aa18.72■□□□□ 0.59
COMMD3-210ENST00000472610 STK17AQ9UEE5 414 aa18.72■□□□□ 0.59
COMMD3-210ENST00000472610 PRG3Q9Y2Y8 225 aaPredicted RBP18.72■□□□□ 0.59
COMMD3-210ENST00000472610 NPHP3-ACAD11A0A0J9YXS1 232 aa18.71■□□□□ 0.59
COMMD3-210ENST00000472610 SOD2P04179 222 aa18.71■□□□□ 0.59
COMMD3-210ENST00000472610 KRT18P05783 430 aaKnown RBP18.71■□□□□ 0.59
COMMD3-210ENST00000472610 HOXB8P17481 243 aaPredicted RBP18.71■□□□□ 0.59
COMMD3-210ENST00000472610 NASPP49321 788 aaPredicted RBP18.71■□□□□ 0.59
COMMD3-210ENST00000472610 NCKAP1LP55160 1127 aa18.71■□□□□ 0.59
COMMD3-210ENST00000472610 TUSC3Q13454 348 aa18.71■□□□□ 0.59
COMMD3-210ENST00000472610 ZNF568Q3ZCX4 644 aa18.71■□□□□ 0.59
COMMD3-210ENST00000472610 SPECC1Q5M775 1068 aa18.71■□□□□ 0.59
COMMD3-210ENST00000472610 PPFIBP1Q86W92 1011 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms