RNA–Protein interactions for RNA: ENST00000472224.1

CLRN1-205, Transcript of clarin 1, humanhuman

TSL 3

Gene CLRN1, Length 606 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-205ENST00000472224 ZHX3Q9H4I2 956 aa13.09□□□□□ -0.31
CLRN1-205ENST00000472224 RNF19AQ9NV58 838 aa13.09□□□□□ -0.31
CLRN1-205ENST00000472224 PRMT7Q9NVM4 692 aaPredicted RBP13.09□□□□□ -0.31
CLRN1-205ENST00000472224 RWDD3Q9Y3V2 267 aa13.09□□□□□ -0.31
CLRN1-205ENST00000472224 PCDHB2Q9Y5E7 798 aa13.09□□□□□ -0.31
CLRN1-205ENST00000472224 TRIP11Q15643 1979 aa13.09□□□□□ -0.31
CLRN1-205ENST00000472224 MEIS3P2A8K0S8 358 aa13.08□□□□□ -0.32
CLRN1-205ENST00000472224 SFI1A8K8P3 1242 aa13.08□□□□□ -0.32
CLRN1-205ENST00000472224 FAM13AO94988 1023 aa13.08□□□□□ -0.32
CLRN1-205ENST00000472224 NPTXRO95502 500 aa13.08□□□□□ -0.32
CLRN1-205ENST00000472224 GUCY2CP25092 1073 aa13.08□□□□□ -0.32
CLRN1-205ENST00000472224 HOXA11P31270 313 aaPredicted RBP13.08□□□□□ -0.32
CLRN1-205ENST00000472224 STAT6P42226 847 aa13.08□□□□□ -0.32
CLRN1-205ENST00000472224 MAPK7Q13164 816 aa13.08□□□□□ -0.32
CLRN1-205ENST00000472224 PRPF4BQ13523 1007 aaKnown RBP13.08□□□□□ -0.32
CLRN1-205ENST00000472224 PCBP1Q15365 356 aaKnown RBP eCLIP13.08□□□□□ -0.32
CLRN1-205ENST00000472224 MAPK6Q16659 721 aa13.08□□□□□ -0.32
CLRN1-205ENST00000472224 CLLU1OSQ5K130 101 aa13.08□□□□□ -0.32
CLRN1-205ENST00000472224 UBXN11Q5T124 520 aa13.08□□□□□ -0.32
CLRN1-205ENST00000472224 RRAGBQ5VZM2 374 aa13.08□□□□□ -0.32
CLRN1-205ENST00000472224 GLB1LQ6UWU2 654 aa13.08□□□□□ -0.32
CLRN1-205ENST00000472224 ASCL5Q7RTU5 278 aa13.08□□□□□ -0.32
CLRN1-205ENST00000472224 ZNF598Q86UK7 904 aaKnown RBP13.08□□□□□ -0.32
CLRN1-205ENST00000472224 SUGP1Q8IWZ8 645 aaKnown RBP13.08□□□□□ -0.32
CLRN1-205ENST00000472224 DAW1Q8N136 415 aa13.08□□□□□ -0.32
CLRN1-205ENST00000472224 LRRC43Q8N309 656 aa13.08□□□□□ -0.32
CLRN1-205ENST00000472224 KCTD17Q8N5Z5 321 aa13.08□□□□□ -0.32
CLRN1-205ENST00000472224 PDILTQ8N807 584 aa13.08□□□□□ -0.32
CLRN1-205ENST00000472224 LARP4BQ92615 738 aaKnown RBP13.08□□□□□ -0.32
CLRN1-205ENST00000472224 PGBD4Q96DM1 585 aa13.08□□□□□ -0.32
CLRN1-205ENST00000472224 CCDC51Q96ER9 411 aa13.08□□□□□ -0.32
CLRN1-205ENST00000472224 CASD1Q96PB1 797 aa13.08□□□□□ -0.32
CLRN1-205ENST00000472224 TIPINQ9BVW5 301 aa13.08□□□□□ -0.32
CLRN1-205ENST00000472224 PANK2Q9BZ23 570 aa13.08□□□□□ -0.32
CLRN1-205ENST00000472224 KMT5AQ9NQR1 393 aa13.08□□□□□ -0.32
CLRN1-205ENST00000472224 BLOC1S4Q9NUP1 217 aa13.08□□□□□ -0.32
CLRN1-205ENST00000472224 USP20Q9Y2K6 914 aa13.08□□□□□ -0.32
CLRN1-205ENST00000472224 PHLPP2Q6ZVD8 1323 aa13.08□□□□□ -0.32
CLRN1-205ENST00000472224 CNTNAP2Q9UHC6 1331 aa13.08□□□□□ -0.32
CLRN1-205ENST00000472224 DNAH14Q0VDD8 3507 aa13.08□□□□□ -0.32
CLRN1-205ENST00000472224 CACNA1HO95180 2353 aa13.07□□□□□ -0.32
CLRN1-205ENST00000472224 SLC16A4O15374 487 aa13.07□□□□□ -0.32
CLRN1-205ENST00000472224 LINC01565O15544 149 aa13.07□□□□□ -0.32
CLRN1-205ENST00000472224 TBCAO75347 108 aaKnown RBP13.07□□□□□ -0.32
CLRN1-205ENST00000472224 BRD1O95696 1058 aa13.07□□□□□ -0.32
CLRN1-205ENST00000472224 EOMESO95936 686 aa13.07□□□□□ -0.32
CLRN1-205ENST00000472224 LINC00271P0C7V0 271 aa13.07□□□□□ -0.32
CLRN1-205ENST00000472224 GTF2F1P35269 517 aaKnown RBP eCLIP13.07□□□□□ -0.32
CLRN1-205ENST00000472224 BMPR1AP36894 532 aa13.07□□□□□ -0.32
CLRN1-205ENST00000472224 NPTX2P47972 431 aa13.07□□□□□ -0.32
CLRN1-205ENST00000472224 ME1P48163 572 aa13.07□□□□□ -0.32
CLRN1-205ENST00000472224 ZXDAP98168 799 aa13.07□□□□□ -0.32
CLRN1-205ENST00000472224 SMAD4Q13485 552 aaKnown RBP13.07□□□□□ -0.32
CLRN1-205ENST00000472224 KCNG4Q8TDN1 519 aa13.07□□□□□ -0.32
CLRN1-205ENST00000472224 ATOH1Q92858 354 aaPredicted RBP13.07□□□□□ -0.32
CLRN1-205ENST00000472224 CLP1Q92989 425 aaKnown RBP13.07□□□□□ -0.32
CLRN1-205ENST00000472224 CHAMP1Q96JM3 812 aa13.07□□□□□ -0.32
CLRN1-205ENST00000472224 REEP2Q9BRK0 252 aa13.07□□□□□ -0.32
CLRN1-205ENST00000472224 C11orf84Q9BUA3 381 aaPredicted RBP13.07□□□□□ -0.32
CLRN1-205ENST00000472224 GBP3Q9H0R5 595 aa13.07□□□□□ -0.32
CLRN1-205ENST00000472224 NXF3Q9H4D5 531 aaKnown RBP13.07□□□□□ -0.32
CLRN1-205ENST00000472224 TYW1Q9NV66 732 aaKnown RBP13.07□□□□□ -0.32
CLRN1-205ENST00000472224 STK17AQ9UEE5 414 aa13.07□□□□□ -0.32
CLRN1-205ENST00000472224 CFAP45Q9UL16 551 aa13.07□□□□□ -0.32
CLRN1-205ENST00000472224 HES2Q9Y543 173 aa13.07□□□□□ -0.32
CLRN1-205ENST00000472224 MORC2Q9Y6X9 1032 aaPredicted RBP13.07□□□□□ -0.32
CLRN1-205ENST00000472224 WDR87Q6ZQQ6 2873 aa13.07□□□□□ -0.32
CLRN1-205ENST00000472224 CITO14578 2027 aa13.06□□□□□ -0.32
CLRN1-205ENST00000472224 PROB1E7EW31 1015 aa13.06□□□□□ -0.32
CLRN1-205ENST00000472224 K7ERI5 159 aa13.06□□□□□ -0.32
CLRN1-205ENST00000472224 N4BP3O15049 544 aa13.06□□□□□ -0.32
CLRN1-205ENST00000472224 CUTAO60888 179 aa13.06□□□□□ -0.32
CLRN1-205ENST00000472224 PPP6R2O75170 966 aa13.06□□□□□ -0.32
CLRN1-205ENST00000472224 ITGA4P13612 1032 aa13.06□□□□□ -0.32
CLRN1-205ENST00000472224 PLS3P13797 630 aa13.06□□□□□ -0.32
CLRN1-205ENST00000472224 LAG3P18627 525 aa13.06□□□□□ -0.32
CLRN1-205ENST00000472224 PBX3P40426 434 aa13.06□□□□□ -0.32
CLRN1-205ENST00000472224 EFNA5P52803 228 aa13.06□□□□□ -0.32
CLRN1-205ENST00000472224 RNASELQ05823 741 aaKnown RBP13.06□□□□□ -0.32
CLRN1-205ENST00000472224 TPRNQ4KMQ1 711 aa13.06□□□□□ -0.32
CLRN1-205ENST00000472224 ARSHQ5FYA8 562 aa13.06□□□□□ -0.32
CLRN1-205ENST00000472224 SLC27A1Q6PCB7 646 aa13.06□□□□□ -0.32
CLRN1-205ENST00000472224 CCDC73Q6ZRK6 1079 aa13.06□□□□□ -0.32
CLRN1-205ENST00000472224 THNSL1Q8IYQ7 743 aa13.06□□□□□ -0.32
CLRN1-205ENST00000472224 HACE1Q8IYU2 909 aa13.06□□□□□ -0.32
CLRN1-205ENST00000472224 EFCAB3Q8N7B9 438 aa13.06□□□□□ -0.32
CLRN1-205ENST00000472224 COLGALT1Q8NBJ5 622 aa13.06□□□□□ -0.32
CLRN1-205ENST00000472224 URGCPQ8TCY9 931 aa13.06□□□□□ -0.32
CLRN1-205ENST00000472224 PRIMPOLQ96LW4 560 aa13.06□□□□□ -0.32
CLRN1-205ENST00000472224 ADPGKQ9BRR6 497 aa13.06□□□□□ -0.32
CLRN1-205ENST00000472224 TRAIPQ9BWF2 469 aa13.06□□□□□ -0.32
CLRN1-205ENST00000472224 MRPL9Q9BYD2 267 aaKnown RBP13.06□□□□□ -0.32
CLRN1-205ENST00000472224 CCDC113Q9H0I3 377 aa13.06□□□□□ -0.32
CLRN1-205ENST00000472224 FZD8Q9H461 694 aa13.06□□□□□ -0.32
CLRN1-205ENST00000472224 PDZD7Q9H5P4 517 aa13.06□□□□□ -0.32
CLRN1-205ENST00000472224 RSAD1Q9HA92 442 aa13.06□□□□□ -0.32
CLRN1-205ENST00000472224 AAASQ9NRG9 546 aa13.06□□□□□ -0.32
CLRN1-205ENST00000472224 KCND2Q9NZV8 630 aa13.06□□□□□ -0.32
CLRN1-205ENST00000472224 ZDHHC9Q9Y397 364 aa13.06□□□□□ -0.32
CLRN1-205ENST00000472224 IPPQ9Y573 584 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms