RNA–Protein interactions for RNA: ENST00000471438.2

CSMD2-208, Transcript of CUB and Sushi multiple domains 2, human

TSL 5

Gene CSMD2, Length 355 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSMD2-208	ENST00000471438	HOOK1	Q9UJC3	728 aa	Known RBP	4.09	□□□□□ -1.75
CSMD2-208	ENST00000471438	PPP2R2C	Q9Y2T4	447 aa		4.09	□□□□□ -1.75
CSMD2-208	ENST00000471438	RIPOR2	Q9Y4F9	1068 aa		4.09	□□□□□ -1.75
CSMD2-208	ENST00000471438	MRFAP1	Q9Y605	127 aa		4.09	□□□□□ -1.75
CSMD2-208	ENST00000471438	ZNF831	Q5JPB2	1677 aa		4.09	□□□□□ -1.76
CSMD2-208	ENST00000471438	CHD8	Q9HCK8	2581 aa		4.08	□□□□□ -1.76
CSMD2-208	ENST00000471438		A0A0G2JLW4	131 aa		4.08	□□□□□ -1.76
CSMD2-208	ENST00000471438	KLF18	A0A0U1RQI7	1052 aa		4.08	□□□□□ -1.76
CSMD2-208	ENST00000471438		A0A1B0GUL7	405 aa		4.08	□□□□□ -1.76
CSMD2-208	ENST00000471438	TCRBV5S4A2T	A0A5A2	114 aa		4.08	□□□□□ -1.76
CSMD2-208	ENST00000471438	ZNF213	O14771	459 aa		4.08	□□□□□ -1.76
CSMD2-208	ENST00000471438	CHGB	P05060	677 aa		4.08	□□□□□ -1.76
CSMD2-208	ENST00000471438	PCCA	P05165	728 aa	Predicted RBP	4.08	□□□□□ -1.76
CSMD2-208	ENST00000471438	LAMB1	P07942	1786 aa		4.08	□□□□□ -1.76
CSMD2-208	ENST00000471438	MYL6B	P14649	208 aa		4.08	□□□□□ -1.76
CSMD2-208	ENST00000471438	PFKL	P17858	780 aa		4.08	□□□□□ -1.76
CSMD2-208	ENST00000471438	ADD2	P35612	726 aa		4.08	□□□□□ -1.76
CSMD2-208	ENST00000471438	MAP2K2	P36507	400 aa		4.08	□□□□□ -1.76
CSMD2-208	ENST00000471438	ARL4A	P40617	200 aa		4.08	□□□□□ -1.76
CSMD2-208	ENST00000471438	RTP1	P59025	263 aa		4.08	□□□□□ -1.76
CSMD2-208	ENST00000471438	CEBPZ	Q03701	1054 aa	Known RBP	4.08	□□□□□ -1.76
CSMD2-208	ENST00000471438	SLC39A6	Q13433	755 aa		4.08	□□□□□ -1.76
CSMD2-208	ENST00000471438	TCIRG1	Q13488	830 aa		4.08	□□□□□ -1.76
CSMD2-208	ENST00000471438	COL9A2	Q14055	689 aa	Predicted RBP	4.08	□□□□□ -1.76
CSMD2-208	ENST00000471438	TTF1	Q15361	905 aa	Predicted RBP	4.08	□□□□□ -1.76
CSMD2-208	ENST00000471438	SF3A1	Q15459	793 aa	Known RBP	4.08	□□□□□ -1.76
CSMD2-208	ENST00000471438	ZRSR1	Q15695	479 aa	Known RBP	4.08	□□□□□ -1.76
CSMD2-208	ENST00000471438	CCDC88A	Q3V6T2	1871 aa		4.08	□□□□□ -1.76
CSMD2-208	ENST00000471438	LONRF3	Q496Y0	759 aa		4.08	□□□□□ -1.76
CSMD2-208	ENST00000471438	VWA3B	Q502W6	1294 aa		4.08	□□□□□ -1.76
CSMD2-208	ENST00000471438	ARHGAP29	Q52LW3	1261 aa		4.08	□□□□□ -1.76
CSMD2-208	ENST00000471438	SEZ6	Q53EL9	994 aa		4.08	□□□□□ -1.76
CSMD2-208	ENST00000471438	TEX35	Q5T0J7	233 aa		4.08	□□□□□ -1.76
CSMD2-208	ENST00000471438	CDCP2	Q5VXM1	449 aa		4.08	□□□□□ -1.76
CSMD2-208	ENST00000471438	SPECC1L	Q69YQ0	1117 aa		4.08	□□□□□ -1.76
CSMD2-208	ENST00000471438	KRT40	Q6A162	431 aa		4.08	□□□□□ -1.76
CSMD2-208	ENST00000471438	OLFM4	Q6UX06	510 aa		4.08	□□□□□ -1.76
CSMD2-208	ENST00000471438	ITIH6	Q6UXX5	1313 aa		4.08	□□□□□ -1.76
CSMD2-208	ENST00000471438	RASGRP2	Q7LDG7	609 aa		4.08	□□□□□ -1.76
CSMD2-208	ENST00000471438	NLRC3	Q7RTR2	1065 aa		4.08	□□□□□ -1.76
CSMD2-208	ENST00000471438	REXO1	Q8N1G1	1221 aa	Known RBP	4.08	□□□□□ -1.76
CSMD2-208	ENST00000471438	TMTC2	Q8N394	836 aa		4.08	□□□□□ -1.76
CSMD2-208	ENST00000471438	TXLNB	Q8N3L3	684 aa		4.08	□□□□□ -1.76
CSMD2-208	ENST00000471438	WASF1	Q92558	559 aa		4.08	□□□□□ -1.76
CSMD2-208	ENST00000471438	DVL3	Q92997	716 aa	Predicted RBP	4.08	□□□□□ -1.76
CSMD2-208	ENST00000471438	MED15	Q96RN5	788 aa		4.08	□□□□□ -1.76
CSMD2-208	ENST00000471438	DNAJC2	Q99543	621 aa	Known RBP	4.08	□□□□□ -1.76
CSMD2-208	ENST00000471438	TEX13A	Q9BXU3	409 aa	Predicted RBP	4.08	□□□□□ -1.76
CSMD2-208	ENST00000471438	HDAC8	Q9BY41	377 aa		4.08	□□□□□ -1.76
CSMD2-208	ENST00000471438	LRRC2	Q9BYS8	371 aa		4.08	□□□□□ -1.76
CSMD2-208	ENST00000471438	KIF13B	Q9NQT8	1826 aa		4.08	□□□□□ -1.76
CSMD2-208	ENST00000471438	FANCL	Q9NW38	375 aa		4.08	□□□□□ -1.76
CSMD2-208	ENST00000471438	TNFRSF10D	Q9UBN6	386 aa		4.08	□□□□□ -1.76
CSMD2-208	ENST00000471438	FBXO2	Q9UK22	296 aa	Predicted RBP	4.08	□□□□□ -1.76
CSMD2-208	ENST00000471438	FBXL21	Q9UKT6	434 aa		4.08	□□□□□ -1.76
CSMD2-208	ENST00000471438	SRPRB	Q9Y5M8	271 aa	Known RBP	4.08	□□□□□ -1.76
CSMD2-208	ENST00000471438	PAPPA2	Q9BXP8	1791 aa		4.07	□□□□□ -1.76
CSMD2-208	ENST00000471438	RIC1	Q4ADV7	1423 aa		4.07	□□□□□ -1.76
CSMD2-208	ENST00000471438	MROH7-TTC4	A0A0A0MT08	1334 aa		4.07	□□□□□ -1.76
CSMD2-208	ENST00000471438	WTIP	A6NIX2	430 aa	Predicted RBP	4.07	□□□□□ -1.76
CSMD2-208	ENST00000471438	FKTN	O75072	461 aa		4.07	□□□□□ -1.76
CSMD2-208	ENST00000471438	FGR	P09769	529 aa		4.07	□□□□□ -1.76
CSMD2-208	ENST00000471438	UQCRFS1P1	P0C7P4	283 aa		4.07	□□□□□ -1.76
CSMD2-208	ENST00000471438	TOP1	P11387	765 aa	Known RBP	4.07	□□□□□ -1.76
CSMD2-208	ENST00000471438	ATP1A3	P13637	1013 aa		4.07	□□□□□ -1.76
CSMD2-208	ENST00000471438	ZNF16	P17020	682 aa	Predicted RBP	4.07	□□□□□ -1.76
CSMD2-208	ENST00000471438	CASQ1	P31415	396 aa		4.07	□□□□□ -1.76
CSMD2-208	ENST00000471438	NT5C2	P49902	561 aa		4.07	□□□□□ -1.76
CSMD2-208	ENST00000471438	TOB1	P50616	345 aa	Predicted RBP	4.07	□□□□□ -1.76
CSMD2-208	ENST00000471438	PLCD1	P51178	756 aa		4.07	□□□□□ -1.76
CSMD2-208	ENST00000471438	HNRNPH2	P55795	449 aa	Known RBP	4.07	□□□□□ -1.76
CSMD2-208	ENST00000471438	GJA9	P57773	515 aa		4.07	□□□□□ -1.76
CSMD2-208	ENST00000471438	GUCY1B3	Q02153	619 aa		4.07	□□□□□ -1.76
CSMD2-208	ENST00000471438	CUL4B	Q13620	913 aa		4.07	□□□□□ -1.76
CSMD2-208	ENST00000471438	LRRC24	Q50LG9	513 aa		4.07	□□□□□ -1.76
CSMD2-208	ENST00000471438	RILPL1	Q5EBL4	403 aa		4.07	□□□□□ -1.76
CSMD2-208	ENST00000471438	BEND6	Q5SZJ8	279 aa	Predicted RBP	4.07	□□□□□ -1.76
CSMD2-208	ENST00000471438	SPATA1	Q5VX52	437 aa		4.07	□□□□□ -1.76
CSMD2-208	ENST00000471438	TTLL5	Q6EMB2	1281 aa		4.07	□□□□□ -1.76
CSMD2-208	ENST00000471438	OVOS1	Q6IE37	1185 aa		4.07	□□□□□ -1.76
CSMD2-208	ENST00000471438	WDR93	Q6P2C0	686 aa		4.07	□□□□□ -1.76
CSMD2-208	ENST00000471438	GALNT18	Q6P9A2	607 aa		4.07	□□□□□ -1.76
CSMD2-208	ENST00000471438	CPLX2	Q6PUV4	134 aa	Known RBP	4.07	□□□□□ -1.76
CSMD2-208	ENST00000471438	APOA5	Q6Q788	366 aa		4.07	□□□□□ -1.76
CSMD2-208	ENST00000471438	GK5	Q6ZS86	529 aa		4.07	□□□□□ -1.76
CSMD2-208	ENST00000471438	CYB5R4	Q7L1T6	521 aa		4.07	□□□□□ -1.76
CSMD2-208	ENST00000471438	TMC3	Q7Z5M5	1100 aa		4.07	□□□□□ -1.76
CSMD2-208	ENST00000471438	SRGAP1	Q7Z6B7	1085 aa		4.07	□□□□□ -1.76
CSMD2-208	ENST00000471438	VPS37D	Q86XT2	251 aa		4.07	□□□□□ -1.76
CSMD2-208	ENST00000471438	TTC5	Q8N0Z6	440 aa		4.07	□□□□□ -1.76
CSMD2-208	ENST00000471438	CEP112	Q8N8E3	955 aa		4.07	□□□□□ -1.76
CSMD2-208	ENST00000471438	VGLL2	Q8N8G2	317 aa		4.07	□□□□□ -1.76
CSMD2-208	ENST00000471438	ATG4C	Q96DT6	458 aa		4.07	□□□□□ -1.76
CSMD2-208	ENST00000471438	DHRS1	Q96LJ7	313 aa		4.07	□□□□□ -1.76
CSMD2-208	ENST00000471438	NEUROD6	Q96NK8	337 aa		4.07	□□□□□ -1.76
CSMD2-208	ENST00000471438	GSDMA	Q96QA5	445 aa		4.07	□□□□□ -1.76
CSMD2-208	ENST00000471438	CTAGE1	Q96RT6	745 aa		4.07	□□□□□ -1.76
CSMD2-208	ENST00000471438	STRBP	Q96SI9	672 aa	Known RBP	4.07	□□□□□ -1.76
CSMD2-208	ENST00000471438	BAG1	Q99933	345 aa	Predicted RBP	4.07	□□□□□ -1.76
CSMD2-208	ENST00000471438	ALG1	Q9BT22	464 aa		4.07	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms