RNA–Protein interactions for RNA: ENST00000471377.5

HDGF-206, Transcript of heparin binding growth factor, human

TSL 3

Gene HDGF, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDGF-206	ENST00000471377	RNF19A	Q9NV58	838 aa		10.02	□□□□□ -0.81
HDGF-206	ENST00000471377	TYW1	Q9NV66	732 aa	Known RBP	10.02	□□□□□ -0.81
HDGF-206	ENST00000471377	ARHGAP28	Q9P2N2	729 aa		10.02	□□□□□ -0.81
HDGF-206	ENST00000471377	SEL1L	Q9UBV2	794 aa		10.02	□□□□□ -0.81
HDGF-206	ENST00000471377	INPP5F	Q9Y2H2	1132 aa		10.02	□□□□□ -0.81
HDGF-206	ENST00000471377	SZT2	Q5T011	3432 aa		10.02	□□□□□ -0.81
HDGF-206	ENST00000471377	ZMYM2	Q9UBW7	1377 aa		10.01	□□□□□ -0.81
HDGF-206	ENST00000471377		A0A087X0B3	334 aa		10.01	□□□□□ -0.81
HDGF-206	ENST00000471377	NPHP3-ACAD11	A0A0J9YXS1	232 aa		10.01	□□□□□ -0.81
HDGF-206	ENST00000471377		K7ENM7	598 aa		10.01	□□□□□ -0.81
HDGF-206	ENST00000471377	ACTN4	O43707	911 aa	Known RBP	10.01	□□□□□ -0.81
HDGF-206	ENST00000471377	OFD1	O75665	1012 aa		10.01	□□□□□ -0.81
HDGF-206	ENST00000471377	LINC00271	P0C7V0	271 aa		10.01	□□□□□ -0.81
HDGF-206	ENST00000471377	ALDH7A1	P49419	539 aa	Known RBP	10.01	□□□□□ -0.81
HDGF-206	ENST00000471377	ZNF131	P52739	623 aa		10.01	□□□□□ -0.81
HDGF-206	ENST00000471377	KRT17	Q04695	432 aa		10.01	□□□□□ -0.81
HDGF-206	ENST00000471377	UBE3A	Q05086	875 aa		10.01	□□□□□ -0.81
HDGF-206	ENST00000471377	GIT2	Q14161	759 aa		10.01	□□□□□ -0.81
HDGF-206	ENST00000471377	STX1A	Q16623	288 aa		10.01	□□□□□ -0.81
HDGF-206	ENST00000471377	ANO6	Q4KMQ2	910 aa		10.01	□□□□□ -0.81
HDGF-206	ENST00000471377	TIGD5	Q53EQ6	642 aa		10.01	□□□□□ -0.81
HDGF-206	ENST00000471377	FAM178B	Q8IXR5	827 aa		10.01	□□□□□ -0.81
HDGF-206	ENST00000471377	ELOA2	Q8IYF1	753 aa	Predicted RBP	10.01	□□□□□ -0.81
HDGF-206	ENST00000471377	COLGALT1	Q8NBJ5	622 aa		10.01	□□□□□ -0.81
HDGF-206	ENST00000471377	SMG8	Q8ND04	991 aa	Known RBP	10.01	□□□□□ -0.81
HDGF-206	ENST00000471377	FAM200A	Q8TCP9	573 aa		10.01	□□□□□ -0.81
HDGF-206	ENST00000471377	LRRC15	Q8TF66	581 aa		10.01	□□□□□ -0.81
HDGF-206	ENST00000471377	ERCC4	Q92889	916 aa	Predicted RBP	10.01	□□□□□ -0.81
HDGF-206	ENST00000471377	PPP2R3C	Q969Q6	453 aa		10.01	□□□□□ -0.81
HDGF-206	ENST00000471377	FAM193B	Q96PV7	902 aa	Predicted RBP	10.01	□□□□□ -0.81
HDGF-206	ENST00000471377	RPS6KC1	Q96S38	1066 aa		10.01	□□□□□ -0.81
HDGF-206	ENST00000471377	APOL6	Q9BWW8	343 aa		10.01	□□□□□ -0.81
HDGF-206	ENST00000471377	PDZD7	Q9H5P4	517 aa		10.01	□□□□□ -0.81
HDGF-206	ENST00000471377	PARP2	Q9UGN5	583 aa		10.01	□□□□□ -0.81
HDGF-206	ENST00000471377	PUF60	Q9UHX1	559 aa	Known RBP	10.01	□□□□□ -0.81
HDGF-206	ENST00000471377	TNFSF13B	Q9Y275	285 aa		10.01	□□□□□ -0.81
HDGF-206	ENST00000471377	GIT1	Q9Y2X7	761 aa		10.01	□□□□□ -0.81
HDGF-206	ENST00000471377	MTCH2	Q9Y6C9	303 aa		10.01	□□□□□ -0.81
HDGF-206	ENST00000471377	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	10	□□□□□ -0.81
HDGF-206	ENST00000471377	POLR2D	O15514	142 aa	Known RBP	10	□□□□□ -0.81
HDGF-206	ENST00000471377	LPXN	O60711	386 aa		10	□□□□□ -0.81
HDGF-206	ENST00000471377	ZC3H11A	O75152	810 aa	Known RBP eCLIP	10	□□□□□ -0.81
HDGF-206	ENST00000471377	MAPT	P10636	758 aa	Known RBP	10	□□□□□ -0.81
HDGF-206	ENST00000471377	GAP43	P17677	238 aa		10	□□□□□ -0.81
HDGF-206	ENST00000471377	NCKAP1L	P55160	1127 aa		10	□□□□□ -0.81
HDGF-206	ENST00000471377	BMS1	Q14692	1282 aa	Known RBP	10	□□□□□ -0.81
HDGF-206	ENST00000471377	SKIV2L	Q15477	1246 aa	Known RBP	10	□□□□□ -0.81
HDGF-206	ENST00000471377	ZNF568	Q3ZCX4	644 aa		10	□□□□□ -0.81
HDGF-206	ENST00000471377	KCNT2	Q6UVM3	1135 aa		10	□□□□□ -0.81
HDGF-206	ENST00000471377	ZPBP2	Q6X784	338 aa		10	□□□□□ -0.81
HDGF-206	ENST00000471377	AGMO	Q6ZNB7	445 aa		10	□□□□□ -0.81
HDGF-206	ENST00000471377	C11orf57	Q6ZUT1	292 aa	Predicted RBP	10	□□□□□ -0.81
HDGF-206	ENST00000471377	DYM	Q7RTS9	669 aa		10	□□□□□ -0.81
HDGF-206	ENST00000471377	HAUS6	Q7Z4H7	955 aa		10	□□□□□ -0.81
HDGF-206	ENST00000471377	CDR2L	Q86X02	465 aa	Predicted RBP	10	□□□□□ -0.81
HDGF-206	ENST00000471377	KLHL23	Q8NBE8	558 aa		10	□□□□□ -0.81
HDGF-206	ENST00000471377	TMEM161B	Q8NDZ6	487 aa		10	□□□□□ -0.81
HDGF-206	ENST00000471377	PPM1E	Q8WY54	764 aa		10	□□□□□ -0.81
HDGF-206	ENST00000471377	DDX12P	Q92771	950 aa		10	□□□□□ -0.81
HDGF-206	ENST00000471377	KCNN1	Q92952	543 aa		10	□□□□□ -0.81
HDGF-206	ENST00000471377	DHX58	Q96C10	678 aa		10	□□□□□ -0.81
HDGF-206	ENST00000471377	BICD1	Q96G01	975 aa		10	□□□□□ -0.81
HDGF-206	ENST00000471377	PPP1R9B	Q96SB3	815 aa		10	□□□□□ -0.81
HDGF-206	ENST00000471377	ACO2	Q99798	780 aa	Known RBP	10	□□□□□ -0.81
HDGF-206	ENST00000471377	TCHP	Q9BT92	498 aa		10	□□□□□ -0.81
HDGF-206	ENST00000471377	DNAJC25	Q9H1X3	360 aa		10	□□□□□ -0.81
HDGF-206	ENST00000471377	NXF3	Q9H4D5	531 aa	Known RBP	10	□□□□□ -0.81
HDGF-206	ENST00000471377	CWH43	Q9H720	699 aa		10	□□□□□ -0.81
HDGF-206	ENST00000471377	CBX8	Q9HC52	389 aa		10	□□□□□ -0.81
HDGF-206	ENST00000471377	TBC1D13	Q9NVG8	400 aa		10	□□□□□ -0.81
HDGF-206	ENST00000471377	SPG21	Q9NZD8	308 aa		10	□□□□□ -0.81
HDGF-206	ENST00000471377	KIAA1468	Q9P260	1216 aa		10	□□□□□ -0.81
HDGF-206	ENST00000471377	SERTAD1	Q9UHV2	236 aa		10	□□□□□ -0.81
HDGF-206	ENST00000471377	PLAGL2	Q9UPG8	496 aa		10	□□□□□ -0.81
HDGF-206	ENST00000471377	HES2	Q9Y543	173 aa		10	□□□□□ -0.81
HDGF-206	ENST00000471377	ARL5C	A6NH57	179 aa		9.99	□□□□□ -0.81
HDGF-206	ENST00000471377	MYMK	A6NI61	221 aa		9.99	□□□□□ -0.81
HDGF-206	ENST00000471377	MEIS3P2	A8K0S8	358 aa		9.99	□□□□□ -0.81
HDGF-206	ENST00000471377	GRM6	O15303	877 aa		9.99	□□□□□ -0.81
HDGF-206	ENST00000471377	INPPL1	O15357	1258 aa		9.99	□□□□□ -0.81
HDGF-206	ENST00000471377	TOM1L1	O75674	476 aa		9.99	□□□□□ -0.81
HDGF-206	ENST00000471377	FGF18	O76093	207 aa		9.99	□□□□□ -0.81
HDGF-206	ENST00000471377	POMC	P01189	267 aa		9.99	□□□□□ -0.81
HDGF-206	ENST00000471377	ITGB1	P05556	798 aa		9.99	□□□□□ -0.81
HDGF-206	ENST00000471377	MCF2	P10911	925 aa		9.99	□□□□□ -0.81
HDGF-206	ENST00000471377	IDE	P14735	1019 aa		9.99	□□□□□ -0.81
HDGF-206	ENST00000471377	AKAP5	P24588	427 aa		9.99	□□□□□ -0.81
HDGF-206	ENST00000471377	MLH1	P40692	756 aa		9.99	□□□□□ -0.81
HDGF-206	ENST00000471377	MATR3	P43243	847 aa	Known RBP eCLIP	9.99	□□□□□ -0.81
HDGF-206	ENST00000471377	YARS	P54577	528 aa	Known RBP	9.99	□□□□□ -0.81
HDGF-206	ENST00000471377	BCAR1	P56945	870 aa		9.99	□□□□□ -0.81
HDGF-206	ENST00000471377	PLCB3	Q01970	1234 aa		9.99	□□□□□ -0.81
HDGF-206	ENST00000471377	CCDC173	Q0VFZ6	552 aa		9.99	□□□□□ -0.81
HDGF-206	ENST00000471377	PNOC	Q13519	176 aa		9.99	□□□□□ -0.81
HDGF-206	ENST00000471377	CCDC85B	Q15834	202 aa	Predicted RBP	9.99	□□□□□ -0.81
HDGF-206	ENST00000471377	E2F4	Q16254	413 aa		9.99	□□□□□ -0.81
HDGF-206	ENST00000471377	NT5DC1	Q5TFE4	455 aa		9.99	□□□□□ -0.81
HDGF-206	ENST00000471377	MPZL3	Q6UWV2	235 aa		9.99	□□□□□ -0.81
HDGF-206	ENST00000471377	LRRC55	Q6ZSA7	311 aa		9.99	□□□□□ -0.81
HDGF-206	ENST00000471377	CCDC65	Q8IXS2	484 aa		9.99	□□□□□ -0.81

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