RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 PNPOQ9NVS9 261 aa8.05□□□□□ -1.12
SMC5-202ENST00000471372 CPA4Q9UI42 421 aa8.05□□□□□ -1.12
SMC5-202ENST00000471372 ADAMTS6Q9UKP5 1117 aa8.05□□□□□ -1.12
SMC5-202ENST00000471372 OGDHLQ9ULD0 1010 aa8.05□□□□□ -1.12
SMC5-202ENST00000471372 PADI4Q9UM07 663 aa8.05□□□□□ -1.12
SMC5-202ENST00000471372 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.04□□□□□ -1.12
SMC5-202ENST00000471372 MYO1FO00160 1098 aa8.04□□□□□ -1.12
SMC5-202ENST00000471372 FGF18O76093 207 aa8.04□□□□□ -1.12
SMC5-202ENST00000471372 IL18BPO95998 194 aa8.04□□□□□ -1.12
SMC5-202ENST00000471372 PRNPP04156 253 aa8.04□□□□□ -1.12
SMC5-202ENST00000471372 RAC2P15153 192 aa8.04□□□□□ -1.12
SMC5-202ENST00000471372 NPR1P16066 1061 aa8.04□□□□□ -1.12
SMC5-202ENST00000471372 RPL17P18621 184 aaKnown RBP8.04□□□□□ -1.12
SMC5-202ENST00000471372 SLC7A1P30825 629 aa8.04□□□□□ -1.12
SMC5-202ENST00000471372 MAPKAPK2P49137 400 aa8.04□□□□□ -1.12
SMC5-202ENST00000471372 NKX3-2P78367 333 aa8.04□□□□□ -1.12
SMC5-202ENST00000471372 FOXD4Q12950 439 aaPredicted RBP8.04□□□□□ -1.12
SMC5-202ENST00000471372 PMS2P11Q13670 270 aa8.04□□□□□ -1.12
SMC5-202ENST00000471372 DGKDQ16760 1214 aa8.04□□□□□ -1.12
SMC5-202ENST00000471372 KLHDC7AQ5VTJ3 777 aa8.04□□□□□ -1.12
SMC5-202ENST00000471372 ABHD15Q6UXT9 468 aa8.04□□□□□ -1.12
SMC5-202ENST00000471372 NFXL1Q6ZNB6 911 aa8.04□□□□□ -1.12
SMC5-202ENST00000471372 Q6ZVL8 140 aa8.04□□□□□ -1.12
SMC5-202ENST00000471372 NBPF11Q86T75 865 aa8.04□□□□□ -1.12
SMC5-202ENST00000471372 SESTD1Q86VW0 696 aa8.04□□□□□ -1.12
SMC5-202ENST00000471372 RNF152Q8N8N0 203 aa8.04□□□□□ -1.12
SMC5-202ENST00000471372 DTX3Q8N9I9 347 aa8.04□□□□□ -1.12
SMC5-202ENST00000471372 TEX19Q8NA77 164 aa8.04□□□□□ -1.12
SMC5-202ENST00000471372 PPP1R14CQ8TAE6 165 aa8.04□□□□□ -1.12
SMC5-202ENST00000471372 ALG3Q92685 438 aa8.04□□□□□ -1.12
SMC5-202ENST00000471372 ARL8AQ96BM9 186 aa8.04□□□□□ -1.12
SMC5-202ENST00000471372 AGO4Q9HCK5 861 aaKnown RBP8.04□□□□□ -1.12
SMC5-202ENST00000471372 PNPLA8Q9NP80 782 aa8.04□□□□□ -1.12
SMC5-202ENST00000471372 CPNE7Q9UBL6 633 aa8.04□□□□□ -1.12
SMC5-202ENST00000471372 DNAI1Q9UI46 699 aa8.04□□□□□ -1.12
SMC5-202ENST00000471372 A0A1W2PR48 441 aa8.03□□□□□ -1.12
SMC5-202ENST00000471372 LY86O95711 162 aa8.03□□□□□ -1.12
SMC5-202ENST00000471372 BRAFP15056 766 aa8.03□□□□□ -1.12
SMC5-202ENST00000471372 CCT5P48643 541 aa8.03□□□□□ -1.12
SMC5-202ENST00000471372 DAG1Q14118 895 aa8.03□□□□□ -1.12
SMC5-202ENST00000471372 CNGA2Q16280 664 aa8.03□□□□□ -1.12
SMC5-202ENST00000471372 CCDC38Q502W7 563 aa8.03□□□□□ -1.12
SMC5-202ENST00000471372 ADGRF1Q5T601 910 aa8.03□□□□□ -1.12
SMC5-202ENST00000471372 WDR78Q5VTH9 848 aa8.03□□□□□ -1.12
SMC5-202ENST00000471372 LVRNQ6Q4G3 990 aa8.03□□□□□ -1.12
SMC5-202ENST00000471372 CD300LDQ6UXZ3 194 aa8.03□□□□□ -1.12
SMC5-202ENST00000471372 NME8Q8N427 588 aa8.03□□□□□ -1.12
SMC5-202ENST00000471372 FLCNQ8NFG4 579 aa8.03□□□□□ -1.12
SMC5-202ENST00000471372 DDX11Q96FC9 970 aa8.03□□□□□ -1.12
SMC5-202ENST00000471372 PAWRQ96IZ0 340 aaKnown RBP8.03□□□□□ -1.12
SMC5-202ENST00000471372 SYT3Q9BQG1 590 aa8.03□□□□□ -1.12
SMC5-202ENST00000471372 UNKQ9C0B0 810 aaKnown RBP8.03□□□□□ -1.12
SMC5-202ENST00000471372 MYLK2Q9H1R3 596 aa8.03□□□□□ -1.12
SMC5-202ENST00000471372 DLL4Q9NR61 685 aa8.03□□□□□ -1.12
SMC5-202ENST00000471372 POLR3BQ9NW08 1133 aaPredicted RBP8.03□□□□□ -1.12
SMC5-202ENST00000471372 MAP3K20Q9NYL2 800 aaKnown RBP8.03□□□□□ -1.12
SMC5-202ENST00000471372 ARHGAP20Q9P2F6 1191 aa8.03□□□□□ -1.12
SMC5-202ENST00000471372 KLHL14Q9P2G3 628 aa8.03□□□□□ -1.12
SMC5-202ENST00000471372 ZNF69Q9UC07 566 aa8.03□□□□□ -1.12
SMC5-202ENST00000471372 CCDC39Q9UFE4 941 aa8.03□□□□□ -1.12
SMC5-202ENST00000471372 GPR52Q9Y2T5 361 aa8.03□□□□□ -1.12
SMC5-202ENST00000471372 RPTORQ8N122 1335 aa8.03□□□□□ -1.12
SMC5-202ENST00000471372 FOXN3O00409 490 aaPredicted RBP8.02□□□□□ -1.13
SMC5-202ENST00000471372 DDX3XO00571 662 aaKnown RBP eCLIP8.02□□□□□ -1.13
SMC5-202ENST00000471372 PRAMEF4O60810 478 aa8.02□□□□□ -1.13
SMC5-202ENST00000471372 MAFO75444 373 aaPredicted RBP8.02□□□□□ -1.13
SMC5-202ENST00000471372 IL18RAPO95256 599 aa8.02□□□□□ -1.13
SMC5-202ENST00000471372 HARSP12081 509 aaKnown RBP8.02□□□□□ -1.13
SMC5-202ENST00000471372 TECP42680 631 aa8.02□□□□□ -1.13
SMC5-202ENST00000471372 ICA1Q05084 483 aa8.02□□□□□ -1.13
SMC5-202ENST00000471372 SNAPC2Q13487 334 aa8.02□□□□□ -1.13
SMC5-202ENST00000471372 PUM3Q15397 648 aaKnown RBP8.02□□□□□ -1.13
SMC5-202ENST00000471372 SLC4A8Q2Y0W8 1093 aa8.02□□□□□ -1.13
SMC5-202ENST00000471372 ZC3H14Q6PJT7 736 aaKnown RBP8.02□□□□□ -1.13
SMC5-202ENST00000471372 FAM180AQ6UWF9 173 aa8.02□□□□□ -1.13
SMC5-202ENST00000471372 MMS22LQ6ZRQ5 1243 aa8.02□□□□□ -1.13
SMC5-202ENST00000471372 RSPH3Q86UC2 560 aa8.02□□□□□ -1.13
SMC5-202ENST00000471372 BCL6BQ8N143 479 aaPredicted RBP8.02□□□□□ -1.13
SMC5-202ENST00000471372 OR10H5Q8NGA6 315 aa8.02□□□□□ -1.13
SMC5-202ENST00000471372 CCHCR1Q8TD31 782 aa8.02□□□□□ -1.13
SMC5-202ENST00000471372 TMX3Q96JJ7 454 aa8.02□□□□□ -1.13
SMC5-202ENST00000471372 FAM167AQ96KS9 214 aa8.02□□□□□ -1.13
SMC5-202ENST00000471372 ISCA1Q9BUE6 129 aa8.02□□□□□ -1.13
SMC5-202ENST00000471372 PAK6Q9NQU5 681 aaPredicted RBP8.02□□□□□ -1.13
SMC5-202ENST00000471372 PCDHA6Q9UN73 950 aa8.02□□□□□ -1.13
SMC5-202ENST00000471372 YBX2Q9Y2T7 364 aaKnown RBP8.02□□□□□ -1.13
SMC5-202ENST00000471372 APOL1O14791 398 aa8.01□□□□□ -1.13
SMC5-202ENST00000471372 ADAMTS3O15072 1205 aa8.01□□□□□ -1.13
SMC5-202ENST00000471372 ENDOD1O94919 500 aa8.01□□□□□ -1.13
SMC5-202ENST00000471372 PARP1P09874 1014 aaKnown RBP8.01□□□□□ -1.13
SMC5-202ENST00000471372 BDNFP23560 247 aa8.01□□□□□ -1.13
SMC5-202ENST00000471372 SUMO3P55854 103 aaPredicted RBP8.01□□□□□ -1.13
SMC5-202ENST00000471372 IRX6P78412 446 aaPredicted RBP8.01□□□□□ -1.13
SMC5-202ENST00000471372 MAPRE1Q15691 268 aaKnown RBP8.01□□□□□ -1.13
SMC5-202ENST00000471372 GGT6Q6P531 493 aa8.01□□□□□ -1.13
SMC5-202ENST00000471372 VSIG10LQ86VR7 867 aa8.01□□□□□ -1.13
SMC5-202ENST00000471372 SYTL1Q8IYJ3 562 aa8.01□□□□□ -1.13
SMC5-202ENST00000471372 CLASRPQ8N2M8 674 aaKnown RBP8.01□□□□□ -1.13
SMC5-202ENST00000471372 ZGPATQ8N5A5 531 aaKnown RBP8.01□□□□□ -1.13
SMC5-202ENST00000471372 IFI44Q8TCB0 444 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms