RNA–Protein interactions for RNA: ENST00000470621.1

SSB-209, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-209ENST00000470621 HS1BP3Q53T59 392 aa7.34□□□□□ -1.23
SSB-209ENST00000470621 C1QL3Q5VWW1 255 aa7.34□□□□□ -1.23
SSB-209ENST00000470621 Q6ZRM9 215 aa7.34□□□□□ -1.23
SSB-209ENST00000470621 PNMA8AQ86V59 439 aaPredicted RBP7.34□□□□□ -1.23
SSB-209ENST00000470621 TRMT2AQ8IZ69 625 aaKnown RBP7.34□□□□□ -1.23
SSB-209ENST00000470621 PAWRQ96IZ0 340 aaKnown RBP7.34□□□□□ -1.23
SSB-209ENST00000470621 CDC5LQ99459 802 aaKnown RBP7.34□□□□□ -1.23
SSB-209ENST00000470621 MPHOSPH9Q99550 1183 aa7.34□□□□□ -1.23
SSB-209ENST00000470621 LSM14BQ9BX40 385 aaKnown RBP7.34□□□□□ -1.23
SSB-209ENST00000470621 SERPINB13Q9UIV8 391 aa7.34□□□□□ -1.23
SSB-209ENST00000470621 SIK3Q9Y2K2 1263 aa7.34□□□□□ -1.23
SSB-209ENST00000470621 PHF2O75151 1096 aa7.33□□□□□ -1.24
SSB-209ENST00000470621 ZRANB2O95218 330 aaKnown RBP eCLIP7.33□□□□□ -1.24
SSB-209ENST00000470621 ECHS1P30084 290 aa7.33□□□□□ -1.24
SSB-209ENST00000470621 HIBADHP31937 336 aaKnown RBP7.33□□□□□ -1.24
SSB-209ENST00000470621 SLC6A9P48067 706 aa7.33□□□□□ -1.24
SSB-209ENST00000470621 KRT85P78386 507 aa7.33□□□□□ -1.24
SSB-209ENST00000470621 APBA1Q02410 837 aa7.33□□□□□ -1.24
SSB-209ENST00000470621 MGAT2Q10469 447 aa7.33□□□□□ -1.24
SSB-209ENST00000470621 SSH1Q8WYL5 1049 aa7.33□□□□□ -1.24
SSB-209ENST00000470621 FAM89AQ96GI7 184 aa7.33□□□□□ -1.24
SSB-209ENST00000470621 CPEB1Q9BZB8 566 aaKnown RBP7.33□□□□□ -1.24
SSB-209ENST00000470621 SLC13A1Q9BZW2 595 aa7.33□□□□□ -1.24
SSB-209ENST00000470621 EPC1Q9H2F5 836 aa7.33□□□□□ -1.24
SSB-209ENST00000470621 LDAHQ9H6V9 325 aa7.33□□□□□ -1.24
SSB-209ENST00000470621 TYW1Q9NV66 732 aaKnown RBP7.33□□□□□ -1.24
SSB-209ENST00000470621 ZBTB21Q9ULJ3 1066 aa7.33□□□□□ -1.24
SSB-209ENST00000470621 CRHR1P34998 444 aa7.32□□□□□ -1.24
SSB-209ENST00000470621 SREBF1P36956 1147 aa7.32□□□□□ -1.24
SSB-209ENST00000470621 PRKD1Q15139 912 aaPredicted RBP7.32□□□□□ -1.24
SSB-209ENST00000470621 MFSD14BQ5SR56 506 aa7.32□□□□□ -1.24
SSB-209ENST00000470621 ANKS6Q68DC2 871 aa7.32□□□□□ -1.24
SSB-209ENST00000470621 OR7D4Q8NG98 312 aa7.32□□□□□ -1.24
SSB-209ENST00000470621 PGBD4Q96DM1 585 aa7.32□□□□□ -1.24
SSB-209ENST00000470621 PDCD2LQ9BRP1 358 aa7.32□□□□□ -1.24
SSB-209ENST00000470621 TSC22D4Q9Y3Q8 395 aa7.32□□□□□ -1.24
SSB-209ENST00000470621 SCNN1GP51170 649 aa7.31□□□□□ -1.24
SSB-209ENST00000470621 NEK2P51955 445 aa7.31□□□□□ -1.24
SSB-209ENST00000470621 RABGGTBP53611 331 aa7.31□□□□□ -1.24
SSB-209ENST00000470621 HHEXQ03014 270 aa7.31□□□□□ -1.24
SSB-209ENST00000470621 CSRP2Q16527 193 aa7.31□□□□□ -1.24
SSB-209ENST00000470621 MFSD5Q6N075 450 aa7.31□□□□□ -1.24
SSB-209ENST00000470621 ZBTB46Q86UZ6 589 aa7.31□□□□□ -1.24
SSB-209ENST00000470621 THEMISQ8N1K5 641 aaPredicted RBP7.31□□□□□ -1.24
SSB-209ENST00000470621 PQLC1Q8N2U9 271 aa7.31□□□□□ -1.24
SSB-209ENST00000470621 RAB24Q969Q5 203 aa7.31□□□□□ -1.24
SSB-209ENST00000470621 MIEF2Q96C03 454 aa7.31□□□□□ -1.24
SSB-209ENST00000470621 UHRF1Q96T88 793 aaPredicted RBP7.31□□□□□ -1.24
SSB-209ENST00000470621 BCO1Q9HAY6 547 aa7.31□□□□□ -1.24
SSB-209ENST00000470621 INTUQ9ULD6 942 aa7.31□□□□□ -1.24
SSB-209ENST00000470621 MYRFQ9Y2G1 1151 aa7.31□□□□□ -1.24
SSB-209ENST00000470621 PLSCR1O15162 318 aa7.3□□□□□ -1.24
SSB-209ENST00000470621 ALDH1L1O75891 902 aa7.3□□□□□ -1.24
SSB-209ENST00000470621 INSRRP14616 1297 aa7.3□□□□□ -1.24
SSB-209ENST00000470621 GNAT2P19087 354 aa7.3□□□□□ -1.24
SSB-209ENST00000470621 HK1P19367 917 aa7.3□□□□□ -1.24
SSB-209ENST00000470621 FPR1P21462 350 aa7.3□□□□□ -1.24
SSB-209ENST00000470621 EDNRBP24530 442 aa7.3□□□□□ -1.24
SSB-209ENST00000470621 PTPN7P35236 360 aa7.3□□□□□ -1.24
SSB-209ENST00000470621 KIF23Q02241 960 aaPredicted RBP7.3□□□□□ -1.24
SSB-209ENST00000470621 APBB1IPQ7Z5R6 666 aaPredicted RBP7.3□□□□□ -1.24
SSB-209ENST00000470621 SPRED1Q7Z699 444 aa7.3□□□□□ -1.24
SSB-209ENST00000470621 ANKRD35Q8N283 1001 aa7.3□□□□□ -1.24
SSB-209ENST00000470621 MDGA1Q8NFP4 955 aa7.3□□□□□ -1.24
SSB-209ENST00000470621 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.3□□□□□ -1.24
SSB-209ENST00000470621 ATXN2LQ8WWM7 1075 aaKnown RBP7.3□□□□□ -1.24
SSB-209ENST00000470621 ST8SIA2Q92186 375 aa7.3□□□□□ -1.24
SSB-209ENST00000470621 CPPED1Q9BRF8 314 aaPredicted RBP7.3□□□□□ -1.24
SSB-209ENST00000470621 KCNH6Q9H252 994 aa7.3□□□□□ -1.24
SSB-209ENST00000470621 LIMCH1Q9UPQ0 1083 aa7.3□□□□□ -1.24
SSB-209ENST00000470621 MRFAP1Q9Y605 127 aa7.3□□□□□ -1.24
SSB-209ENST00000470621 KLRG2A4D1S0 409 aaPredicted RBP7.29□□□□□ -1.24
SSB-209ENST00000470621 GASTP01350 101 aa7.29□□□□□ -1.24
SSB-209ENST00000470621 CCND1P24385 295 aa7.29□□□□□ -1.24
SSB-209ENST00000470621 ACRV1P26436 265 aa7.29□□□□□ -1.24
SSB-209ENST00000470621 GUCY1A2P33402 732 aa7.29□□□□□ -1.24
SSB-209ENST00000470621 PTTG1IPP53801 180 aa7.29□□□□□ -1.24
SSB-209ENST00000470621 PER3P56645 1201 aa7.29□□□□□ -1.24
SSB-209ENST00000470621 PUM1Q14671 1186 aaKnown RBP eCLIP7.29□□□□□ -1.24
SSB-209ENST00000470621 RRP1BQ14684 758 aaKnown RBP7.29□□□□□ -1.24
SSB-209ENST00000470621 TTF1Q15361 905 aaPredicted RBP7.29□□□□□ -1.24
SSB-209ENST00000470621 USP39Q53GS9 565 aaKnown RBP7.29□□□□□ -1.24
SSB-209ENST00000470621 EFCAB2Q5VUJ9 269 aa7.29□□□□□ -1.24
SSB-209ENST00000470621 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.29□□□□□ -1.24
SSB-209ENST00000470621 SLC35B2Q8TB61 432 aa7.29□□□□□ -1.24
SSB-209ENST00000470621 CCHCR1Q8TD31 782 aa7.29□□□□□ -1.24
SSB-209ENST00000470621 STON2Q8WXE9 905 aa7.29□□□□□ -1.24
SSB-209ENST00000470621 EXTL1Q92935 676 aa7.29□□□□□ -1.24
SSB-209ENST00000470621 CHMP4CQ96CF2 233 aa7.29□□□□□ -1.24
SSB-209ENST00000470621 CDK5RAP1Q96SZ6 601 aaKnown RBP7.29□□□□□ -1.24
SSB-209ENST00000470621 AJAP1Q9UKB5 411 aaPredicted RBP7.29□□□□□ -1.24
SSB-209ENST00000470621 LUC7L2Q9Y383 392 aaKnown RBP7.29□□□□□ -1.24
SSB-209ENST00000470621 TESMINQ9Y4I5 508 aa7.29□□□□□ -1.24
SSB-209ENST00000470621 ATRNL1Q5VV63 1379 aa7.29□□□□□ -1.24
SSB-209ENST00000470621 CRHR2Q13324 411 aa7.28□□□□□ -1.24
SSB-209ENST00000470621 PLEKHG6Q3KR16 790 aa7.28□□□□□ -1.24
SSB-209ENST00000470621 C3orf36Q3SXR2 165 aa7.28□□□□□ -1.24
SSB-209ENST00000470621 DOK3Q7L591 496 aa7.28□□□□□ -1.24
SSB-209ENST00000470621 ZNF572Q7Z3I7 529 aaPredicted RBP7.28□□□□□ -1.24
SSB-209ENST00000470621 RAVER1Q8IY67 606 aaKnown RBP7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms