RNA–Protein interactions for RNA: ENST00000470241.2

SMC1A-206, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-206ENST00000470241 SLC9A7Q96T83 725 aa11.55□□□□□ -0.56
SMC1A-206ENST00000470241 ADPGKQ9BRR6 497 aa11.55□□□□□ -0.56
SMC1A-206ENST00000470241 TCHPQ9BT92 498 aa11.55□□□□□ -0.56
SMC1A-206ENST00000470241 GTPBP4Q9BZE4 634 aaKnown RBP11.55□□□□□ -0.56
SMC1A-206ENST00000470241 TRIM6Q9C030 488 aaPredicted RBP11.55□□□□□ -0.56
SMC1A-206ENST00000470241 GBP3Q9H0R5 595 aa11.55□□□□□ -0.56
SMC1A-206ENST00000470241 RNF19AQ9NV58 838 aa11.55□□□□□ -0.56
SMC1A-206ENST00000470241 TMEM161AQ9NX61 479 aa11.55□□□□□ -0.56
SMC1A-206ENST00000470241 SNTG2Q9NY99 539 aa11.55□□□□□ -0.56
SMC1A-206ENST00000470241 HES2Q9Y543 173 aa11.55□□□□□ -0.56
SMC1A-206ENST00000470241 PCDHB7Q9Y5E2 793 aa11.55□□□□□ -0.56
SMC1A-206ENST00000470241 FAM189A1O60320 539 aa11.54□□□□□ -0.56
SMC1A-206ENST00000470241 UPP2O95045 317 aa11.54□□□□□ -0.56
SMC1A-206ENST00000470241 KIF20AO95235 890 aa11.54□□□□□ -0.56
SMC1A-206ENST00000470241 GJB5O95377 273 aa11.54□□□□□ -0.56
SMC1A-206ENST00000470241 EOMESO95936 686 aa11.54□□□□□ -0.56
SMC1A-206ENST00000470241 HARSP12081 509 aaKnown RBP11.54□□□□□ -0.56
SMC1A-206ENST00000470241 ATP2A2P16615 1042 aaKnown RBP11.54□□□□□ -0.56
SMC1A-206ENST00000470241 GRM5P41594 1212 aa11.54□□□□□ -0.56
SMC1A-206ENST00000470241 GATMP50440 423 aa11.54□□□□□ -0.56
SMC1A-206ENST00000470241 SKOR2Q2VWA4 1001 aaPredicted RBP11.54□□□□□ -0.56
SMC1A-206ENST00000470241 ZBTB41Q5SVQ8 909 aa11.54□□□□□ -0.56
SMC1A-206ENST00000470241 SLFN12LQ6IEE8 588 aa11.54□□□□□ -0.56
SMC1A-206ENST00000470241 FAM117BQ6P1L5 589 aa11.54□□□□□ -0.56
SMC1A-206ENST00000470241 APBB1IPQ7Z5R6 666 aaPredicted RBP11.54□□□□□ -0.56
SMC1A-206ENST00000470241 HERC6Q8IVU3 1022 aa11.54□□□□□ -0.56
SMC1A-206ENST00000470241 RNF169Q8NCN4 708 aa11.54□□□□□ -0.56
SMC1A-206ENST00000470241 CBWD1Q9BRT8 395 aa11.54□□□□□ -0.56
SMC1A-206ENST00000470241 MSTO1Q9BUK6 570 aa11.54□□□□□ -0.56
SMC1A-206ENST00000470241 SEMA6BQ9H3T3 888 aa11.54□□□□□ -0.56
SMC1A-206ENST00000470241 AGPAT3Q9NRZ7 376 aa11.54□□□□□ -0.56
SMC1A-206ENST00000470241 TYW1Q9NV66 732 aaKnown RBP11.54□□□□□ -0.56
SMC1A-206ENST00000470241 COLQQ9Y215 455 aaPredicted RBP11.54□□□□□ -0.56
SMC1A-206ENST00000470241 PDE4DIPQ5VU43 2346 aa11.54□□□□□ -0.56
SMC1A-206ENST00000470241 TNRC18O15417 2968 aaPredicted RBP11.54□□□□□ -0.56
SMC1A-206ENST00000470241 GRXCR1A8MXD5 290 aa11.53□□□□□ -0.56
SMC1A-206ENST00000470241 PDXKO00764 312 aa11.53□□□□□ -0.56
SMC1A-206ENST00000470241 CLIC2O15247 247 aa11.53□□□□□ -0.56
SMC1A-206ENST00000470241 OGTO15294 1046 aa11.53□□□□□ -0.56
SMC1A-206ENST00000470241 MEFVO15553 781 aaPredicted RBP11.53□□□□□ -0.56
SMC1A-206ENST00000470241 DGKIO75912 1065 aa11.53□□□□□ -0.56
SMC1A-206ENST00000470241 STAG3L1P0CL83 205 aa11.53□□□□□ -0.56
SMC1A-206ENST00000470241 FGFR1P11362 822 aa11.53□□□□□ -0.56
SMC1A-206ENST00000470241 ITGA4P13612 1032 aa11.53□□□□□ -0.56
SMC1A-206ENST00000470241 GARTP22102 1010 aa11.53□□□□□ -0.56
SMC1A-206ENST00000470241 AKAP5P24588 427 aa11.53□□□□□ -0.56
SMC1A-206ENST00000470241 MATR3P43243 847 aaKnown RBP eCLIP11.53□□□□□ -0.56
SMC1A-206ENST00000470241 NLRP12P59046 1061 aa11.53□□□□□ -0.56
SMC1A-206ENST00000470241 SNRPFP62306 86 aaKnown RBP11.53□□□□□ -0.56
SMC1A-206ENST00000470241 ZCWPW2Q504Y3 356 aa11.53□□□□□ -0.56
SMC1A-206ENST00000470241 SEZ6Q53EL9 994 aa11.53□□□□□ -0.56
SMC1A-206ENST00000470241 CLLU1OSQ5K130 101 aa11.53□□□□□ -0.56
SMC1A-206ENST00000470241 CENPPQ6IPU0 288 aa11.53□□□□□ -0.56
SMC1A-206ENST00000470241 HS2ST1Q7LGA3 356 aa11.53□□□□□ -0.56
SMC1A-206ENST00000470241 C12orf56Q8IXR9 622 aa11.53□□□□□ -0.56
SMC1A-206ENST00000470241 TMEM192Q8IY95 271 aa11.53□□□□□ -0.56
SMC1A-206ENST00000470241 THNSL1Q8IYQ7 743 aa11.53□□□□□ -0.56
SMC1A-206ENST00000470241 ZSWIM2Q8NEG5 633 aa11.53□□□□□ -0.56
SMC1A-206ENST00000470241 POMGNT1Q8WZA1 660 aa11.53□□□□□ -0.56
SMC1A-206ENST00000470241 SYAP1Q96A49 352 aaPredicted RBP11.53□□□□□ -0.56
SMC1A-206ENST00000470241 PGBD4Q96DM1 585 aa11.53□□□□□ -0.56
SMC1A-206ENST00000470241 APOL6Q9BWW8 343 aa11.53□□□□□ -0.56
SMC1A-206ENST00000470241 PCIF1Q9H4Z3 704 aa11.53□□□□□ -0.56
SMC1A-206ENST00000470241 RC3H2Q9HBD1 1191 aaKnown RBP11.53□□□□□ -0.56
SMC1A-206ENST00000470241 RNF216Q9NWF9 866 aaPredicted RBP11.53□□□□□ -0.56
SMC1A-206ENST00000470241 CGNQ9P2M7 1197 aaKnown RBP11.53□□□□□ -0.56
SMC1A-206ENST00000470241 AGO2Q9UKV8 859 aaKnown RBP11.53□□□□□ -0.56
SMC1A-206ENST00000470241 LRFN2Q9ULH4 789 aa11.53□□□□□ -0.56
SMC1A-206ENST00000470241 TRAF3IP3Q9Y228 551 aa11.53□□□□□ -0.56
SMC1A-206ENST00000470241 CEP290O15078 2479 aa11.53□□□□□ -0.56
SMC1A-206ENST00000470241 MYH11P35749 1972 aa11.52□□□□□ -0.56
SMC1A-206ENST00000470241 OFD1O75665 1012 aa11.52□□□□□ -0.57
SMC1A-206ENST00000470241 RECQL4O94761 1208 aa11.52□□□□□ -0.57
SMC1A-206ENST00000470241 PPP1R2P41236 205 aa11.52□□□□□ -0.57
SMC1A-206ENST00000470241 TNFSF9P41273 254 aa11.52□□□□□ -0.57
SMC1A-206ENST00000470241 ACOT2P49753 483 aa11.52□□□□□ -0.57
SMC1A-206ENST00000470241 AFF1P51825 1210 aaKnown RBP11.52□□□□□ -0.57
SMC1A-206ENST00000470241 RABGGTBP53611 331 aa11.52□□□□□ -0.57
SMC1A-206ENST00000470241 PMS1P54277 932 aaKnown RBP11.52□□□□□ -0.57
SMC1A-206ENST00000470241 OSTNP61366 133 aa11.52□□□□□ -0.57
SMC1A-206ENST00000470241 HTRA4P83105 476 aaPredicted RBP11.52□□□□□ -0.57
SMC1A-206ENST00000470241 DPCR1Q3MIW9 517 aa11.52□□□□□ -0.57
SMC1A-206ENST00000470241 ARMCX5Q6P1M9 558 aa11.52□□□□□ -0.57
SMC1A-206ENST00000470241 CRELD2Q6UXH1 353 aaPredicted RBP11.52□□□□□ -0.57
SMC1A-206ENST00000470241 HACE1Q8IYU2 909 aa11.52□□□□□ -0.57
SMC1A-206ENST00000470241 MLKLQ8NB16 471 aa11.52□□□□□ -0.57
SMC1A-206ENST00000470241 GOLGA5Q8TBA6 731 aa11.52□□□□□ -0.57
SMC1A-206ENST00000470241 HELQQ8TDG4 1101 aa11.52□□□□□ -0.57
SMC1A-206ENST00000470241 TMEM174Q8WUU8 243 aa11.52□□□□□ -0.57
SMC1A-206ENST00000470241 P2RX5Q93086 422 aa11.52□□□□□ -0.57
SMC1A-206ENST00000470241 ZNF689Q96CS4 500 aaPredicted RBP11.52□□□□□ -0.57
SMC1A-206ENST00000470241 SAAL1Q96ER3 474 aa11.52□□□□□ -0.57
SMC1A-206ENST00000470241 DHTKD1Q96HY7 919 aaPredicted RBP11.52□□□□□ -0.57
SMC1A-206ENST00000470241 CASD1Q96PB1 797 aa11.52□□□□□ -0.57
SMC1A-206ENST00000470241 GAD1Q99259 594 aa11.52□□□□□ -0.57
SMC1A-206ENST00000470241 CCDC94Q9BW85 323 aaPredicted RBP11.52□□□□□ -0.57
SMC1A-206ENST00000470241 CXCL16Q9H2A7 254 aa11.52□□□□□ -0.57
SMC1A-206ENST00000470241 RSAD1Q9HA92 442 aa11.52□□□□□ -0.57
SMC1A-206ENST00000470241 DMAC2Q9NW81 257 aa11.52□□□□□ -0.57
SMC1A-206ENST00000470241 HSPBP1Q9NZL4 362 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms