RNA–Protein interactions for RNA: ENST00000469802.5

COL9A3-208, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-208ENST00000469802 KIAA1841Q6NSI8 718 aa18.03■□□□□ 0.48
COL9A3-208ENST00000469802 CES5AQ6NT32 575 aa18.03■□□□□ 0.48
COL9A3-208ENST00000469802 PPFIBP1Q86W92 1011 aa18.03■□□□□ 0.48
COL9A3-208ENST00000469802 KLHL5Q96PQ7 755 aa18.03■□□□□ 0.48
COL9A3-208ENST00000469802 APOL6Q9BWW8 343 aa18.03■□□□□ 0.48
COL9A3-208ENST00000469802 BHMT2Q9H2M3 363 aa18.03■□□□□ 0.48
COL9A3-208ENST00000469802 PDZD7Q9H5P4 517 aa18.03■□□□□ 0.48
COL9A3-208ENST00000469802 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.03■□□□□ 0.48
COL9A3-208ENST00000469802 F8W810 466 aa18.02■□□□□ 0.48
COL9A3-208ENST00000469802 CITO14578 2027 aa18.02■□□□□ 0.48
COL9A3-208ENST00000469802 AKAP5P24588 427 aa18.02■□□□□ 0.48
COL9A3-208ENST00000469802 MTHFRP42898 656 aa18.02■□□□□ 0.48
COL9A3-208ENST00000469802 OR1G1P47890 313 aa18.02■□□□□ 0.48
COL9A3-208ENST00000469802 CLCN4P51793 760 aa18.02■□□□□ 0.48
COL9A3-208ENST00000469802 ZXDAP98168 799 aa18.02■□□□□ 0.48
COL9A3-208ENST00000469802 PPP2R5AQ15172 486 aa18.02■□□□□ 0.48
COL9A3-208ENST00000469802 IL17AQ16552 155 aa18.02■□□□□ 0.48
COL9A3-208ENST00000469802 FAM122AQ96E09 287 aa18.02■□□□□ 0.48
COL9A3-208ENST00000469802 TMX3Q96JJ7 454 aa18.02■□□□□ 0.48
COL9A3-208ENST00000469802 MRPL17Q9NRX2 175 aaKnown RBP18.02■□□□□ 0.48
COL9A3-208ENST00000469802 KIAA1024Q9UPX6 916 aa18.02■□□□□ 0.48
COL9A3-208ENST00000469802 KIF3AQ9Y496 699 aa18.02■□□□□ 0.48
COL9A3-208ENST00000469802 ACKR2O00590 384 aa18.01■□□□□ 0.47
COL9A3-208ENST00000469802 N4BP3O15049 544 aa18.01■□□□□ 0.47
COL9A3-208ENST00000469802 SSBP05455 408 aaKnown RBP eCLIP18.01■□□□□ 0.47
COL9A3-208ENST00000469802 PRKCBP05771 671 aa18.01■□□□□ 0.47
COL9A3-208ENST00000469802 URODP06132 367 aa18.01■□□□□ 0.47
COL9A3-208ENST00000469802 MAPK6Q16659 721 aa18.01■□□□□ 0.47
COL9A3-208ENST00000469802 PTPN21Q16825 1174 aa18.01■□□□□ 0.47
COL9A3-208ENST00000469802 RARS2Q5T160 578 aaKnown RBP18.01■□□□□ 0.47
COL9A3-208ENST00000469802 TRIM67Q6ZTA4 783 aa18.01■□□□□ 0.47
COL9A3-208ENST00000469802 BMP8AQ7Z5Y6 402 aa18.01■□□□□ 0.47
COL9A3-208ENST00000469802 C12orf76Q8N812 135 aaPredicted RBP18.01■□□□□ 0.47
COL9A3-208ENST00000469802 TMEM87AQ8NBN3 555 aa18.01■□□□□ 0.47
COL9A3-208ENST00000469802 FEZF2Q8TBJ5 459 aa18.01■□□□□ 0.47
COL9A3-208ENST00000469802 SNX29Q8TEQ0 813 aa18.01■□□□□ 0.47
COL9A3-208ENST00000469802 RIPOR3Q96MK2 946 aa18.01■□□□□ 0.47
COL9A3-208ENST00000469802 RPS6KC1Q96S38 1066 aa18.01■□□□□ 0.47
COL9A3-208ENST00000469802 EMILIN2Q9BXX0 1053 aa18.01■□□□□ 0.47
COL9A3-208ENST00000469802 RAB34Q9BZG1 259 aa18.01■□□□□ 0.47
COL9A3-208ENST00000469802 SFXN1Q9H9B4 322 aa18.01■□□□□ 0.47
COL9A3-208ENST00000469802 DDX19AQ9NUU7 478 aaKnown RBP18.01■□□□□ 0.47
COL9A3-208ENST00000469802 NR2E1Q9Y466 385 aa18.01■□□□□ 0.47
COL9A3-208ENST00000469802 STK24Q9Y6E0 443 aa18.01■□□□□ 0.47
COL9A3-208ENST00000469802 PP2D1A8MPX8 630 aa18■□□□□ 0.47
COL9A3-208ENST00000469802 WEE2P0C1S8 567 aa18■□□□□ 0.47
COL9A3-208ENST00000469802 GLUD2P49448 558 aa18■□□□□ 0.47
COL9A3-208ENST00000469802 DSG1Q02413 1049 aa18■□□□□ 0.47
COL9A3-208ENST00000469802 PRPF4BQ13523 1007 aaKnown RBP18■□□□□ 0.47
COL9A3-208ENST00000469802 KIAA0319Q5VV43 1072 aa18■□□□□ 0.47
COL9A3-208ENST00000469802 KANK3Q6NY19 840 aa18■□□□□ 0.47
COL9A3-208ENST00000469802 TAS1R1Q7RTX1 841 aa18■□□□□ 0.47
COL9A3-208ENST00000469802 DEPTORQ8TB45 409 aa18■□□□□ 0.47
COL9A3-208ENST00000469802 KIFAP3Q92845 792 aa18■□□□□ 0.47
COL9A3-208ENST00000469802 FBXL18Q96ME1 805 aa18■□□□□ 0.47
COL9A3-208ENST00000469802 MMTAG2Q9BU76 263 aaKnown RBP18■□□□□ 0.47
COL9A3-208ENST00000469802 KIFC3Q9BVG8 833 aa18■□□□□ 0.47
COL9A3-208ENST00000469802 RXFP1Q9HBX9 757 aa18■□□□□ 0.47
COL9A3-208ENST00000469802 CHST7Q9NS84 486 aa18■□□□□ 0.47
COL9A3-208ENST00000469802 KLK14Q9P0G3 267 aa18■□□□□ 0.47
COL9A3-208ENST00000469802 DOCK8Q8NF50 2099 aa18■□□□□ 0.47
COL9A3-208ENST00000469802 WDFY4Q6ZS81 3184 aa17.99■□□□□ 0.47
COL9A3-208ENST00000469802 TMEM221A6NGB7 291 aa17.99■□□□□ 0.47
COL9A3-208ENST00000469802 C2CD4DB7Z1M9 353 aa17.99■□□□□ 0.47
COL9A3-208ENST00000469802 M0R296 226 aa17.99■□□□□ 0.47
COL9A3-208ENST00000469802 PTGESO14684 152 aa17.99■□□□□ 0.47
COL9A3-208ENST00000469802 NR1I2O75469 434 aa17.99■□□□□ 0.47
COL9A3-208ENST00000469802 SP100P23497 879 aaPredicted RBP17.99■□□□□ 0.47
COL9A3-208ENST00000469802 ATP2C1P98194 919 aaPredicted RBP17.99■□□□□ 0.47
COL9A3-208ENST00000469802 NAB2Q15742 525 aa17.99■□□□□ 0.47
COL9A3-208ENST00000469802 RILPL1Q5EBL4 403 aa17.99■□□□□ 0.47
COL9A3-208ENST00000469802 EEF1DP3Q658K8 133 aa17.99■□□□□ 0.47
COL9A3-208ENST00000469802 CABP7Q86V35 215 aa17.99■□□□□ 0.47
COL9A3-208ENST00000469802 GPR65Q8IYL9 337 aa17.99■□□□□ 0.47
COL9A3-208ENST00000469802 DAW1Q8N136 415 aa17.99■□□□□ 0.47
COL9A3-208ENST00000469802 COLEC11Q9BWP8 271 aa17.99■□□□□ 0.47
COL9A3-208ENST00000469802 DAXXQ9UER7 740 aaPredicted RBP17.99■□□□□ 0.47
COL9A3-208ENST00000469802 PARP2Q9UGN5 583 aa17.99■□□□□ 0.47
COL9A3-208ENST00000469802 SSX2IPQ9Y2D8 614 aa17.99■□□□□ 0.47
COL9A3-208ENST00000469802 USP20Q9Y2K6 914 aa17.99■□□□□ 0.47
COL9A3-208ENST00000469802 ZDBF2Q9HCK1 2354 aa17.99■□□□□ 0.47
COL9A3-208ENST00000469802 E9PMD0 336 aa17.98■□□□□ 0.47
COL9A3-208ENST00000469802 C2CD2LO14523 706 aa17.98■□□□□ 0.47
COL9A3-208ENST00000469802 TEX28O15482 410 aa17.98■□□□□ 0.47
COL9A3-208ENST00000469802 RECQL4O94761 1208 aa17.98■□□□□ 0.47
COL9A3-208ENST00000469802 PAPLNO95428 1278 aa17.98■□□□□ 0.47
COL9A3-208ENST00000469802 ADH1AP07327 375 aa17.98■□□□□ 0.47
COL9A3-208ENST00000469802 KLRC2P26717 231 aa17.98■□□□□ 0.47
COL9A3-208ENST00000469802 GJB2P29033 226 aa17.98■□□□□ 0.47
COL9A3-208ENST00000469802 EFNA5P52803 228 aa17.98■□□□□ 0.47
COL9A3-208ENST00000469802 SIGLEC14Q08ET2 396 aa17.98■□□□□ 0.47
COL9A3-208ENST00000469802 FUT10Q6P4F1 479 aa17.98■□□□□ 0.47
COL9A3-208ENST00000469802 KCNK18Q7Z418 384 aa17.98■□□□□ 0.47
COL9A3-208ENST00000469802 GPR149Q86SP6 731 aa17.98■□□□□ 0.47
COL9A3-208ENST00000469802 ASIC4Q96FT7 647 aa17.98■□□□□ 0.47
COL9A3-208ENST00000469802 IFT74Q96LB3 600 aa17.98■□□□□ 0.47
COL9A3-208ENST00000469802 TBC1D32Q96NH3 1257 aa17.98■□□□□ 0.47
COL9A3-208ENST00000469802 GPR62Q9BZJ7 368 aa17.98■□□□□ 0.47
COL9A3-208ENST00000469802 KCNH6Q9H252 994 aa17.98■□□□□ 0.47
COL9A3-208ENST00000469802 CXCL16Q9H2A7 254 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms