RNA–Protein interactions for RNA: ENST00000469778.1

SPTLC1-204, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-204ENST00000469778 PRR29P0C7W0 189 aa13.81□□□□□ -0.2
SPTLC1-204ENST00000469778 MYBP10242 640 aa13.81□□□□□ -0.2
SPTLC1-204ENST00000469778 CASP1P29466 404 aa13.81□□□□□ -0.2
SPTLC1-204ENST00000469778 GRM5P41594 1212 aa13.81□□□□□ -0.2
SPTLC1-204ENST00000469778 YARSP54577 528 aaKnown RBP13.81□□□□□ -0.2
SPTLC1-204ENST00000469778 DEFB103AP81534 67 aa13.81□□□□□ -0.2
SPTLC1-204ENST00000469778 STIM1Q13586 685 aa13.81□□□□□ -0.2
SPTLC1-204ENST00000469778 NOLC1Q14978 699 aaKnown RBP eCLIP13.81□□□□□ -0.2
SPTLC1-204ENST00000469778 ZNF568Q3ZCX4 644 aa13.81□□□□□ -0.2
SPTLC1-204ENST00000469778 GPR153Q6NV75 609 aa13.81□□□□□ -0.2
SPTLC1-204ENST00000469778 FOXR2Q6PJQ5 311 aa13.81□□□□□ -0.2
SPTLC1-204ENST00000469778 CD302Q8IX05 232 aa13.81□□□□□ -0.2
SPTLC1-204ENST00000469778 C12orf56Q8IXR9 622 aa13.81□□□□□ -0.2
SPTLC1-204ENST00000469778 CMTR2Q8IYT2 770 aaKnown RBP13.81□□□□□ -0.2
SPTLC1-204ENST00000469778 ZNF689Q96CS4 500 aaPredicted RBP13.81□□□□□ -0.2
SPTLC1-204ENST00000469778 CCDC94Q9BW85 323 aaPredicted RBP13.81□□□□□ -0.2
SPTLC1-204ENST00000469778 MRPL9Q9BYD2 267 aaKnown RBP13.81□□□□□ -0.2
SPTLC1-204ENST00000469778 PLEKHA5Q9HAU0 1116 aa13.81□□□□□ -0.2
SPTLC1-204ENST00000469778 RWDD3Q9Y3V2 267 aa13.81□□□□□ -0.2
SPTLC1-204ENST00000469778 IPPQ9Y573 584 aa13.81□□□□□ -0.2
SPTLC1-204ENST00000469778 TMEM265A0A087WTH1 108 aa13.8□□□□□ -0.2
SPTLC1-204ENST00000469778 PDXKO00764 312 aa13.8□□□□□ -0.2
SPTLC1-204ENST00000469778 ABLIM1O14639 778 aa13.8□□□□□ -0.2
SPTLC1-204ENST00000469778 OGTO15294 1046 aa13.8□□□□□ -0.2
SPTLC1-204ENST00000469778 PRPF6O94906 941 aaKnown RBP13.8□□□□□ -0.2
SPTLC1-204ENST00000469778 NPTXRO95502 500 aa13.8□□□□□ -0.2
SPTLC1-204ENST00000469778 CLTAP09496 248 aa13.8□□□□□ -0.2
SPTLC1-204ENST00000469778 CASP5P51878 434 aa13.8□□□□□ -0.2
SPTLC1-204ENST00000469778 CT47A1Q5JQC4 288 aaPredicted RBP13.8□□□□□ -0.2
SPTLC1-204ENST00000469778 SMG8Q8ND04 991 aaKnown RBP13.8□□□□□ -0.2
SPTLC1-204ENST00000469778 URGCPQ8TCY9 931 aa13.8□□□□□ -0.2
SPTLC1-204ENST00000469778 GPT2Q8TD30 523 aa13.8□□□□□ -0.2
SPTLC1-204ENST00000469778 SP7Q8TDD2 431 aaPredicted RBP13.8□□□□□ -0.2
SPTLC1-204ENST00000469778 ACAP3Q96P50 834 aa13.8□□□□□ -0.2
SPTLC1-204ENST00000469778 YME1L1Q96TA2 773 aa13.8□□□□□ -0.2
SPTLC1-204ENST00000469778 EIF2AQ9BY44 585 aaKnown RBP13.8□□□□□ -0.2
SPTLC1-204ENST00000469778 CDT1Q9H211 546 aa13.8□□□□□ -0.2
SPTLC1-204ENST00000469778 TTLL13PA6NNM8 815 aa13.79□□□□□ -0.2
SPTLC1-204ENST00000469778 UPP2O95045 317 aa13.79□□□□□ -0.2
SPTLC1-204ENST00000469778 LETM1O95202 739 aaPredicted RBP13.79□□□□□ -0.2
SPTLC1-204ENST00000469778 RPL13P26373 211 aaKnown RBP13.79□□□□□ -0.2
SPTLC1-204ENST00000469778 MATR3P43243 847 aaKnown RBP eCLIP13.79□□□□□ -0.2
SPTLC1-204ENST00000469778 MORC3Q14149 939 aa13.79□□□□□ -0.2
SPTLC1-204ENST00000469778 NFIL3Q16649 462 aa13.79□□□□□ -0.2
SPTLC1-204ENST00000469778 EEF1DP3Q658K8 133 aa13.79□□□□□ -0.2
SPTLC1-204ENST00000469778 SLC9A9Q8IVB4 645 aa13.79□□□□□ -0.2
SPTLC1-204ENST00000469778 MLKLQ8NB16 471 aa13.79□□□□□ -0.2
SPTLC1-204ENST00000469778 KIAA0895Q8NCT3 520 aa13.79□□□□□ -0.2
SPTLC1-204ENST00000469778 POMGNT1Q8WZA1 660 aa13.79□□□□□ -0.2
SPTLC1-204ENST00000469778 DHTKD1Q96HY7 919 aaPredicted RBP13.79□□□□□ -0.2
SPTLC1-204ENST00000469778 SAMD11Q96NU1 681 aa13.79□□□□□ -0.2
SPTLC1-204ENST00000469778 MSTO1Q9BUK6 570 aa13.79□□□□□ -0.2
SPTLC1-204ENST00000469778 RSAD1Q9HA92 442 aa13.79□□□□□ -0.2
SPTLC1-204ENST00000469778 AAASQ9NRG9 546 aa13.79□□□□□ -0.2
SPTLC1-204ENST00000469778 TYW1Q9NV66 732 aaKnown RBP13.79□□□□□ -0.2
SPTLC1-204ENST00000469778 AGO2Q9UKV8 859 aaKnown RBP13.79□□□□□ -0.2
SPTLC1-204ENST00000469778 TRAF3IP3Q9Y228 551 aa13.79□□□□□ -0.2
SPTLC1-204ENST00000469778 MICAL3Q7RTP6 2002 aa13.79□□□□□ -0.2
SPTLC1-204ENST00000469778 PSMA7O14818 248 aa13.78□□□□□ -0.2
SPTLC1-204ENST00000469778 CALUO43852 315 aaPredicted RBP13.78□□□□□ -0.2
SPTLC1-204ENST00000469778 OFD1O75665 1012 aa13.78□□□□□ -0.2
SPTLC1-204ENST00000469778 ATF7P17544 494 aaPredicted RBP13.78□□□□□ -0.2
SPTLC1-204ENST00000469778 HOXD13P35453 343 aa13.78□□□□□ -0.2
SPTLC1-204ENST00000469778 KCNA1Q09470 495 aa13.78□□□□□ -0.2
SPTLC1-204ENST00000469778 BTG3Q14201 252 aaPredicted RBP13.78□□□□□ -0.2
SPTLC1-204ENST00000469778 CAMK4Q16566 473 aa13.78□□□□□ -0.2
SPTLC1-204ENST00000469778 KLHL40Q2TBA0 621 aa13.78□□□□□ -0.2
SPTLC1-204ENST00000469778 NOMO2Q5JPE7 1267 aa13.78□□□□□ -0.2
SPTLC1-204ENST00000469778 AGMOQ6ZNB7 445 aa13.78□□□□□ -0.2
SPTLC1-204ENST00000469778 RBM43Q6ZSC3 357 aaKnown RBP13.78□□□□□ -0.2
SPTLC1-204ENST00000469778 RNF169Q8NCN4 708 aa13.78□□□□□ -0.2
SPTLC1-204ENST00000469778 HPS3Q969F9 1004 aa13.78□□□□□ -0.2
SPTLC1-204ENST00000469778 RC3H2Q9HBD1 1191 aaKnown RBP13.78□□□□□ -0.2
SPTLC1-204ENST00000469778 ANKFY1Q9P2R3 1169 aa13.78□□□□□ -0.2
SPTLC1-204ENST00000469778 STK39Q9UEW8 545 aa13.78□□□□□ -0.2
SPTLC1-204ENST00000469778 MAN1B1Q9UKM7 699 aa13.78□□□□□ -0.2
SPTLC1-204ENST00000469778 ARL5CA6NH57 179 aa13.77□□□□□ -0.21
SPTLC1-204ENST00000469778 ANKRD63C9JTQ0 380 aa13.77□□□□□ -0.21
SPTLC1-204ENST00000469778 TGFB1I1O43294 461 aa13.77□□□□□ -0.21
SPTLC1-204ENST00000469778 EXTL3O43909 919 aa13.77□□□□□ -0.21
SPTLC1-204ENST00000469778 EDN1P05305 212 aa13.77□□□□□ -0.21
SPTLC1-204ENST00000469778 ADRB2P07550 413 aa13.77□□□□□ -0.21
SPTLC1-204ENST00000469778 KCNE1P15382 129 aa13.77□□□□□ -0.21
SPTLC1-204ENST00000469778 ADSSP30520 456 aa13.77□□□□□ -0.21
SPTLC1-204ENST00000469778 LRRC63Q05C16 580 aa13.77□□□□□ -0.21
SPTLC1-204ENST00000469778 COL4A6Q14031 1691 aa13.77□□□□□ -0.21
SPTLC1-204ENST00000469778 SURF1Q15526 300 aa13.77□□□□□ -0.21
SPTLC1-204ENST00000469778 EDRF1Q3B7T1 1238 aa13.77□□□□□ -0.21
SPTLC1-204ENST00000469778 XKR4Q5GH76 650 aa13.77□□□□□ -0.21
SPTLC1-204ENST00000469778 CCDC183Q5T5S1 534 aa13.77□□□□□ -0.21
SPTLC1-204ENST00000469778 FAM109BQ6ICB4 259 aaPredicted RBP13.77□□□□□ -0.21
SPTLC1-204ENST00000469778 ARMCX5Q6P1M9 558 aa13.77□□□□□ -0.21
SPTLC1-204ENST00000469778 ZBTB33Q86T24 672 aa13.77□□□□□ -0.21
SPTLC1-204ENST00000469778 NT5DC4Q86YG4 428 aa13.77□□□□□ -0.21
SPTLC1-204ENST00000469778 LRRC43Q8N309 656 aa13.77□□□□□ -0.21
SPTLC1-204ENST00000469778 FIBCD1Q8N539 461 aa13.77□□□□□ -0.21
SPTLC1-204ENST00000469778 CLP1Q92989 425 aaKnown RBP13.77□□□□□ -0.21
SPTLC1-204ENST00000469778 ZBTB45Q96K62 511 aaPredicted RBP13.77□□□□□ -0.21
SPTLC1-204ENST00000469778 FBXL18Q96ME1 805 aa13.77□□□□□ -0.21
SPTLC1-204ENST00000469778 FGFBP2Q9BYJ0 223 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms