RNA–Protein interactions for RNA: ENST00000469504.1

COL4A3-204, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL4A3, Length 521 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-204ENST00000469504 CCDC149Q6ZUS6 474 aa12.15□□□□□ -0.46
COL4A3-204ENST00000469504 GPR149Q86SP6 731 aa12.15□□□□□ -0.46
COL4A3-204ENST00000469504 FAM184AQ8NB25 1140 aa12.15□□□□□ -0.46
COL4A3-204ENST00000469504 FBXO18Q8NFZ0 1043 aa12.15□□□□□ -0.46
COL4A3-204ENST00000469504 PIGOQ8TEQ8 1089 aa12.15□□□□□ -0.46
COL4A3-204ENST00000469504 ACSF2Q96CM8 615 aaPredicted RBP12.15□□□□□ -0.46
COL4A3-204ENST00000469504 ASIC4Q96FT7 647 aa12.15□□□□□ -0.46
COL4A3-204ENST00000469504 RPS6KC1Q96S38 1066 aa12.15□□□□□ -0.46
COL4A3-204ENST00000469504 GAD1Q99259 594 aa12.15□□□□□ -0.46
COL4A3-204ENST00000469504 APOL5Q9BWW9 433 aa12.15□□□□□ -0.46
COL4A3-204ENST00000469504 VN1R3Q9BXE9 311 aa12.15□□□□□ -0.46
COL4A3-204ENST00000469504 RAB34Q9BZG1 259 aa12.15□□□□□ -0.46
COL4A3-204ENST00000469504 FZD8Q9H461 694 aa12.15□□□□□ -0.46
COL4A3-204ENST00000469504 RXFP1Q9HBX9 757 aa12.15□□□□□ -0.46
COL4A3-204ENST00000469504 TSHZ2Q9NRE2 1034 aa12.15□□□□□ -0.46
COL4A3-204ENST00000469504 MARCH5Q9NX47 278 aa12.15□□□□□ -0.46
COL4A3-204ENST00000469504 NOL7Q9UMY1 257 aaKnown RBP12.15□□□□□ -0.46
COL4A3-204ENST00000469504 KIF3AQ9Y496 699 aa12.15□□□□□ -0.46
COL4A3-204ENST00000469504 PHLPP2Q6ZVD8 1323 aa12.14□□□□□ -0.47
COL4A3-204ENST00000469504 ARID2Q68CP9 1835 aa12.14□□□□□ -0.47
COL4A3-204ENST00000469504 LRRIQ4A6NIV6 560 aa12.14□□□□□ -0.47
COL4A3-204ENST00000469504 C2CD4DB7Z1M9 353 aa12.14□□□□□ -0.47
COL4A3-204ENST00000469504 LAD1O00515 517 aa12.14□□□□□ -0.47
COL4A3-204ENST00000469504 N4BP3O15049 544 aa12.14□□□□□ -0.47
COL4A3-204ENST00000469504 B4GALT3O60512 393 aa12.14□□□□□ -0.47
COL4A3-204ENST00000469504 EFEMP2O95967 443 aa12.14□□□□□ -0.47
COL4A3-204ENST00000469504 CNPP09543 421 aaKnown RBP12.14□□□□□ -0.47
COL4A3-204ENST00000469504 CYP11B2P19099 503 aa12.14□□□□□ -0.47
COL4A3-204ENST00000469504 NAMPTP43490 491 aa12.14□□□□□ -0.47
COL4A3-204ENST00000469504 GLUD2P49448 558 aa12.14□□□□□ -0.47
COL4A3-204ENST00000469504 SCNN1GP51170 649 aa12.14□□□□□ -0.47
COL4A3-204ENST00000469504 CLCN6P51797 869 aa12.14□□□□□ -0.47
COL4A3-204ENST00000469504 AFF1P51825 1210 aaKnown RBP12.14□□□□□ -0.47
COL4A3-204ENST00000469504 DSG1Q02413 1049 aa12.14□□□□□ -0.47
COL4A3-204ENST00000469504 ST3GAL1Q11201 340 aa12.14□□□□□ -0.47
COL4A3-204ENST00000469504 MAPK6Q16659 721 aa12.14□□□□□ -0.47
COL4A3-204ENST00000469504 OTOP3Q7RTS5 596 aa12.14□□□□□ -0.47
COL4A3-204ENST00000469504 APBB1IPQ7Z5R6 666 aaPredicted RBP12.14□□□□□ -0.47
COL4A3-204ENST00000469504 NOSTRINQ8IVI9 506 aa12.14□□□□□ -0.47
COL4A3-204ENST00000469504 CCDC83Q8IWF9 413 aa12.14□□□□□ -0.47
COL4A3-204ENST00000469504 KREMEN2Q8NCW0 462 aa12.14□□□□□ -0.47
COL4A3-204ENST00000469504 AUTS2Q8WXX7 1259 aa12.14□□□□□ -0.47
COL4A3-204ENST00000469504 STAMQ92783 540 aa12.14□□□□□ -0.47
COL4A3-204ENST00000469504 CPB2Q96IY4 423 aa12.14□□□□□ -0.47
COL4A3-204ENST00000469504 ADPGKQ9BRR6 497 aa12.14□□□□□ -0.47
COL4A3-204ENST00000469504 TMEM60Q9H2L4 133 aa12.14□□□□□ -0.47
COL4A3-204ENST00000469504 PLEKHA4Q9H4M7 779 aa12.14□□□□□ -0.47
COL4A3-204ENST00000469504 CHST7Q9NS84 486 aa12.14□□□□□ -0.47
COL4A3-204ENST00000469504 ARHGEF35A5YM69 484 aa12.13□□□□□ -0.47
COL4A3-204ENST00000469504 WNT7AO00755 349 aa12.13□□□□□ -0.47
COL4A3-204ENST00000469504 MED24O75448 989 aa12.13□□□□□ -0.47
COL4A3-204ENST00000469504 PAPLNO95428 1278 aa12.13□□□□□ -0.47
COL4A3-204ENST00000469504 GLUD1P00367 558 aa12.13□□□□□ -0.47
COL4A3-204ENST00000469504 EFNA5P52803 228 aa12.13□□□□□ -0.47
COL4A3-204ENST00000469504 PDIA5Q14554 519 aa12.13□□□□□ -0.47
COL4A3-204ENST00000469504 USP41Q3LFD5 358 aa12.13□□□□□ -0.47
COL4A3-204ENST00000469504 TTC38Q5R3I4 469 aa12.13□□□□□ -0.47
COL4A3-204ENST00000469504 KIAA0319Q5VV43 1072 aa12.13□□□□□ -0.47
COL4A3-204ENST00000469504 KCTD17Q8N5Z5 321 aa12.13□□□□□ -0.47
COL4A3-204ENST00000469504 KIFAP3Q92845 792 aa12.13□□□□□ -0.47
COL4A3-204ENST00000469504 NXF3Q9H4D5 531 aaKnown RBP12.13□□□□□ -0.47
COL4A3-204ENST00000469504 FNIP2Q9P278 1114 aa12.13□□□□□ -0.47
COL4A3-204ENST00000469504 PRG3Q9Y2Y8 225 aaPredicted RBP12.13□□□□□ -0.47
COL4A3-204ENST00000469504 HES2Q9Y543 173 aa12.13□□□□□ -0.47
COL4A3-204ENST00000469504 ACKR2O00590 384 aa12.12□□□□□ -0.47
COL4A3-204ENST00000469504 DTNBO60941 627 aa12.12□□□□□ -0.47
COL4A3-204ENST00000469504 NPTXRO95502 500 aa12.12□□□□□ -0.47
COL4A3-204ENST00000469504 SSBP05455 408 aaKnown RBP eCLIP12.12□□□□□ -0.47
COL4A3-204ENST00000469504 U2AF2P26368 475 aaKnown RBP eCLIP12.12□□□□□ -0.47
COL4A3-204ENST00000469504 FOSBP53539 338 aa12.12□□□□□ -0.47
COL4A3-204ENST00000469504 ELAVL2Q12926 359 aaKnown RBP12.12□□□□□ -0.47
COL4A3-204ENST00000469504 DCAF4L1Q3SXM0 396 aa12.12□□□□□ -0.47
COL4A3-204ENST00000469504 FUT10Q6P4F1 479 aa12.12□□□□□ -0.47
COL4A3-204ENST00000469504 PDXDC1Q6P996 788 aa12.12□□□□□ -0.47
COL4A3-204ENST00000469504 PADI6Q6TGC4 694 aa12.12□□□□□ -0.47
COL4A3-204ENST00000469504 TMC5Q6UXY8 1006 aa12.12□□□□□ -0.47
COL4A3-204ENST00000469504 GSTCDQ8NEC7 633 aa12.12□□□□□ -0.47
COL4A3-204ENST00000469504 IFT74Q96LB3 600 aa12.12□□□□□ -0.47
COL4A3-204ENST00000469504 ZFP42Q96MM3 310 aa12.12□□□□□ -0.47
COL4A3-204ENST00000469504 MAN1C1Q9NR34 630 aa12.12□□□□□ -0.47
COL4A3-204ENST00000469504 ZDHHC7Q9NXF8 308 aa12.12□□□□□ -0.47
COL4A3-204ENST00000469504 ADAM28Q9UKQ2 775 aa12.12□□□□□ -0.47
COL4A3-204ENST00000469504 ZDBF2Q9HCK1 2354 aa12.12□□□□□ -0.47
COL4A3-204ENST00000469504 SF3B1O75533 1304 aaKnown RBP eCLIP12.11□□□□□ -0.47
COL4A3-204ENST00000469504 TEX28O15482 410 aa12.11□□□□□ -0.47
COL4A3-204ENST00000469504 B4GALT5O43286 388 aa12.11□□□□□ -0.47
COL4A3-204ENST00000469504 SEC24BO95487 1268 aa12.11□□□□□ -0.47
COL4A3-204ENST00000469504 SP100P23497 879 aaPredicted RBP12.11□□□□□ -0.47
COL4A3-204ENST00000469504 GUCY1B3Q02153 619 aa12.11□□□□□ -0.47
COL4A3-204ENST00000469504 TUSC3Q13454 348 aa12.11□□□□□ -0.47
COL4A3-204ENST00000469504 PRPF4BQ13523 1007 aaKnown RBP12.11□□□□□ -0.47
COL4A3-204ENST00000469504 HSP90AA2PQ14568 343 aaPredicted RBP12.11□□□□□ -0.47
COL4A3-204ENST00000469504 ZNF174Q15697 407 aa12.11□□□□□ -0.47
COL4A3-204ENST00000469504 TMEM132AQ24JP5 1023 aa12.11□□□□□ -0.47
COL4A3-204ENST00000469504 POTEGQ6S5H5 508 aa12.11□□□□□ -0.47
COL4A3-204ENST00000469504 C12orf76Q8N812 135 aaPredicted RBP12.11□□□□□ -0.47
COL4A3-204ENST00000469504 DEPTORQ8TB45 409 aa12.11□□□□□ -0.47
COL4A3-204ENST00000469504 NXPE3Q969Y0 559 aa12.11□□□□□ -0.47
COL4A3-204ENST00000469504 APOL6Q9BWW8 343 aa12.11□□□□□ -0.47
COL4A3-204ENST00000469504 C17orf75Q9HAS0 396 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms