RNA–Protein interactions for RNA: ENST00000469334.5

SMARCE1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,128 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-207ENST00000469334 CALCOCO2Q13137 446 aa9.64□□□□□ -0.87
SMARCE1-207ENST00000469334 SLC39A6Q13433 755 aa9.64□□□□□ -0.87
SMARCE1-207ENST00000469334 MPP2Q14168 576 aa9.64□□□□□ -0.87
SMARCE1-207ENST00000469334 SPARCL1Q14515 664 aa9.64□□□□□ -0.87
SMARCE1-207ENST00000469334 DDB1Q16531 1140 aa9.64□□□□□ -0.87
SMARCE1-207ENST00000469334 TAF1BQ53T94 588 aaPredicted RBP9.64□□□□□ -0.87
SMARCE1-207ENST00000469334 SYDE2Q5VT97 1194 aa9.64□□□□□ -0.87
SMARCE1-207ENST00000469334 FYB2Q5VWT5 728 aa9.64□□□□□ -0.87
SMARCE1-207ENST00000469334 IRF2BP2Q7Z5L9 587 aa9.64□□□□□ -0.87
SMARCE1-207ENST00000469334 CLNKQ7Z7G1 428 aa9.64□□□□□ -0.87
SMARCE1-207ENST00000469334 ADGRG6Q86SQ4 1221 aa9.64□□□□□ -0.87
SMARCE1-207ENST00000469334 CROCCP3Q8IVE0 287 aa9.64□□□□□ -0.87
SMARCE1-207ENST00000469334 TRIM59Q8IWR1 403 aa9.64□□□□□ -0.87
SMARCE1-207ENST00000469334 SCUBE1Q8IWY4 988 aa9.64□□□□□ -0.87
SMARCE1-207ENST00000469334 PDCD7Q8N8D1 485 aaKnown RBP9.64□□□□□ -0.87
SMARCE1-207ENST00000469334 ABTB2Q8N961 1025 aa9.64□□□□□ -0.87
SMARCE1-207ENST00000469334 DAGLBQ8NCG7 672 aa9.64□□□□□ -0.87
SMARCE1-207ENST00000469334 RFFLQ8WZ73 363 aa9.64□□□□□ -0.87
SMARCE1-207ENST00000469334 GLG1Q92896 1179 aa9.64□□□□□ -0.87
SMARCE1-207ENST00000469334 FAIMQ9NVQ4 179 aa9.64□□□□□ -0.87
SMARCE1-207ENST00000469334 WHRNQ9P202 907 aa9.64□□□□□ -0.87
SMARCE1-207ENST00000469334 BIN2Q9UBW5 565 aaPredicted RBP9.64□□□□□ -0.87
SMARCE1-207ENST00000469334 PP2D1A8MPX8 630 aa9.63□□□□□ -0.87
SMARCE1-207ENST00000469334 MIF4GDA9UHW6 222 aaKnown RBP9.63□□□□□ -0.87
SMARCE1-207ENST00000469334 NDC80O14777 642 aa9.63□□□□□ -0.87
SMARCE1-207ENST00000469334 TPD52L2O43399 206 aaKnown RBP9.63□□□□□ -0.87
SMARCE1-207ENST00000469334 GAS8O95995 478 aa9.63□□□□□ -0.87
SMARCE1-207ENST00000469334 PCP11498 1178 aaKnown RBP9.63□□□□□ -0.87
SMARCE1-207ENST00000469334 IGHMBP2P38935 993 aaKnown RBP9.63□□□□□ -0.87
SMARCE1-207ENST00000469334 ORC2Q13416 577 aaPredicted RBP9.63□□□□□ -0.87
SMARCE1-207ENST00000469334 PDK4Q16654 411 aa9.63□□□□□ -0.87
SMARCE1-207ENST00000469334 CYP1B1Q16678 543 aa9.63□□□□□ -0.87
SMARCE1-207ENST00000469334 KYNUQ16719 465 aa9.63□□□□□ -0.87
SMARCE1-207ENST00000469334 CTC1Q2NKJ3 1217 aa9.63□□□□□ -0.87
SMARCE1-207ENST00000469334 IFIT1BQ5T764 474 aaKnown RBP9.63□□□□□ -0.87
SMARCE1-207ENST00000469334 C6orf163Q5TEZ5 329 aa9.63□□□□□ -0.87
SMARCE1-207ENST00000469334 DCAF12L1Q5VU92 463 aa9.63□□□□□ -0.87
SMARCE1-207ENST00000469334 C3orf62Q6ZUJ4 267 aa9.63□□□□□ -0.87
SMARCE1-207ENST00000469334 FAM47EQ6ZV65 393 aa9.63□□□□□ -0.87
SMARCE1-207ENST00000469334 SV2BQ7L1I2 683 aa9.63□□□□□ -0.87
SMARCE1-207ENST00000469334 NLRP9Q7RTR0 991 aa9.63□□□□□ -0.87
SMARCE1-207ENST00000469334 NUP93Q8N1F7 819 aa9.63□□□□□ -0.87
SMARCE1-207ENST00000469334 ERMNQ8TAM6 284 aa9.63□□□□□ -0.87
SMARCE1-207ENST00000469334 UHMK1Q8TAS1 419 aaKnown RBP9.63□□□□□ -0.87
SMARCE1-207ENST00000469334 LRRC15Q8TF66 581 aa9.63□□□□□ -0.87
SMARCE1-207ENST00000469334 PTCD3Q96EY7 689 aaKnown RBP9.63□□□□□ -0.87
SMARCE1-207ENST00000469334 CALML4Q96GE6 196 aa9.63□□□□□ -0.87
SMARCE1-207ENST00000469334 DYDC2Q96IM9 177 aa9.63□□□□□ -0.87
SMARCE1-207ENST00000469334 FNBP1Q96RU3 617 aa9.63□□□□□ -0.87
SMARCE1-207ENST00000469334 ZSCAN10Q96SZ4 725 aaPredicted RBP9.63□□□□□ -0.87
SMARCE1-207ENST00000469334 GPAMQ9HCL2 828 aa9.63□□□□□ -0.87
SMARCE1-207ENST00000469334 ERVK-5Q9HDB9 667 aa9.63□□□□□ -0.87
SMARCE1-207ENST00000469334 NDE1Q9NXR1 346 aa9.63□□□□□ -0.87
SMARCE1-207ENST00000469334 PCDHA4Q9UN74 947 aa9.63□□□□□ -0.87
SMARCE1-207ENST00000469334 NR2E1Q9Y466 385 aa9.63□□□□□ -0.87
SMARCE1-207ENST00000469334 PCDH11YQ9BZA8 1340 aa9.62□□□□□ -0.87
SMARCE1-207ENST00000469334 CCDC194A0A1B0GVG4 234 aa9.62□□□□□ -0.87
SMARCE1-207ENST00000469334 FAM196BA6NMK8 535 aa9.62□□□□□ -0.87
SMARCE1-207ENST00000469334 GYG2O15488 501 aa9.62□□□□□ -0.87
SMARCE1-207ENST00000469334 PRPF4O43172 522 aaKnown RBP eCLIP9.62□□□□□ -0.87
SMARCE1-207ENST00000469334 MAGEC1O60732 1142 aa9.62□□□□□ -0.87
SMARCE1-207ENST00000469334 SUPT3HO75486 399 aa9.62□□□□□ -0.87
SMARCE1-207ENST00000469334 HAUS5O94927 633 aa9.62□□□□□ -0.87
SMARCE1-207ENST00000469334 TMEM253P0C7T8 217 aa9.62□□□□□ -0.87
SMARCE1-207ENST00000469334 ALOX15P16050 662 aaPredicted RBP9.62□□□□□ -0.87
SMARCE1-207ENST00000469334 CREB1P16220 341 aa9.62□□□□□ -0.87
SMARCE1-207ENST00000469334 VCAM1P19320 739 aa9.62□□□□□ -0.87
SMARCE1-207ENST00000469334 VARSP26640 1264 aaKnown RBP9.62□□□□□ -0.87
SMARCE1-207ENST00000469334 TXKP42681 527 aa9.62□□□□□ -0.87
SMARCE1-207ENST00000469334 NEK3P51956 506 aa9.62□□□□□ -0.87
SMARCE1-207ENST00000469334 MTTPP55157 894 aa9.62□□□□□ -0.87
SMARCE1-207ENST00000469334 AP2B1P63010 937 aa9.62□□□□□ -0.87
SMARCE1-207ENST00000469334 CAV1Q03135 178 aa9.62□□□□□ -0.87
SMARCE1-207ENST00000469334 ARID5AQ03989 594 aa9.62□□□□□ -0.87
SMARCE1-207ENST00000469334 PPATQ06203 517 aa9.62□□□□□ -0.87
SMARCE1-207ENST00000469334 ASPHQ12797 758 aa9.62□□□□□ -0.87
SMARCE1-207ENST00000469334 TROAPQ12815 778 aa9.62□□□□□ -0.87
SMARCE1-207ENST00000469334 PRPF4BQ13523 1007 aaKnown RBP9.62□□□□□ -0.87
SMARCE1-207ENST00000469334 KRT72Q14CN4 511 aa9.62□□□□□ -0.87
SMARCE1-207ENST00000469334 TRMT5Q32P41 509 aaKnown RBP9.62□□□□□ -0.87
SMARCE1-207ENST00000469334 DUS1LQ6P1R4 473 aaKnown RBP9.62□□□□□ -0.87
SMARCE1-207ENST00000469334 EPM2AIP1Q7L775 607 aaPredicted RBP9.62□□□□□ -0.87
SMARCE1-207ENST00000469334 VPS52Q8N1B4 723 aa9.62□□□□□ -0.87
SMARCE1-207ENST00000469334 ENAHQ8N8S7 591 aaPredicted RBP9.62□□□□□ -0.87
SMARCE1-207ENST00000469334 SPATA5Q8NB90 893 aa9.62□□□□□ -0.87
SMARCE1-207ENST00000469334 KCNH5Q8NCM2 988 aa9.62□□□□□ -0.87
SMARCE1-207ENST00000469334 SPIRE2Q8WWL2 714 aa9.62□□□□□ -0.87
SMARCE1-207ENST00000469334 ABTB1Q969K4 478 aaPredicted RBP9.62□□□□□ -0.87
SMARCE1-207ENST00000469334 ABHD8Q96I13 439 aa9.62□□□□□ -0.87
SMARCE1-207ENST00000469334 FAM81BQ96LP2 452 aa9.62□□□□□ -0.87
SMARCE1-207ENST00000469334 CRAMP1Q96RY5 1269 aa9.62□□□□□ -0.87
SMARCE1-207ENST00000469334 DDX50Q9BQ39 737 aaKnown RBP9.62□□□□□ -0.87
SMARCE1-207ENST00000469334 CCDC77Q9BR77 488 aa9.62□□□□□ -0.87
SMARCE1-207ENST00000469334 MLXIPLQ9NP71 852 aa9.62□□□□□ -0.87
SMARCE1-207ENST00000469334 CYLDQ9NQC7 956 aa9.62□□□□□ -0.87
SMARCE1-207ENST00000469334 SENP1Q9P0U3 644 aa9.62□□□□□ -0.87
SMARCE1-207ENST00000469334 SMG5Q9UPR3 1016 aaKnown RBP9.62□□□□□ -0.87
SMARCE1-207ENST00000469334 NR2E3Q9Y5X4 410 aa9.62□□□□□ -0.87
SMARCE1-207ENST00000469334 ZMYM2Q9UBW7 1377 aa9.62□□□□□ -0.87
SMARCE1-207ENST00000469334 TMEM2Q9UHN6 1383 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms