RNA–Protein interactions for RNA: ENST00000469123.5

SSBP1-208, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-208ENST00000469123 RNF169Q8NCN4 708 aa9.38□□□□□ -0.91
SSBP1-208ENST00000469123 FBXO22Q8NEZ5 403 aa9.38□□□□□ -0.91
SSBP1-208ENST00000469123 BICD1Q96G01 975 aa9.38□□□□□ -0.91
SSBP1-208ENST00000469123 CASD1Q96PB1 797 aa9.38□□□□□ -0.91
SSBP1-208ENST00000469123 FAM193BQ96PV7 902 aaPredicted RBP9.38□□□□□ -0.91
SSBP1-208ENST00000469123 ACCSQ96QU6 501 aa9.38□□□□□ -0.91
SSBP1-208ENST00000469123 RPS6KC1Q96S38 1066 aa9.38□□□□□ -0.91
SSBP1-208ENST00000469123 TSPAN18Q96SJ8 248 aa9.38□□□□□ -0.91
SSBP1-208ENST00000469123 FIZ1Q96SL8 496 aa9.38□□□□□ -0.91
SSBP1-208ENST00000469123 CCDC94Q9BW85 323 aaPredicted RBP9.38□□□□□ -0.91
SSBP1-208ENST00000469123 TTYH1Q9H313 450 aaPredicted RBP9.38□□□□□ -0.91
SSBP1-208ENST00000469123 PTPRHQ9HD43 1115 aa9.38□□□□□ -0.91
SSBP1-208ENST00000469123 LZTS1Q9Y250 596 aa9.38□□□□□ -0.91
SSBP1-208ENST00000469123 FSD2A1L4K1 749 aa9.37□□□□□ -0.91
SSBP1-208ENST00000469123 LCHNA4D1U4 455 aa9.37□□□□□ -0.91
SSBP1-208ENST00000469123 H3BNC9 293 aa9.37□□□□□ -0.91
SSBP1-208ENST00000469123 CLDN3O15551 220 aa9.37□□□□□ -0.91
SSBP1-208ENST00000469123 NR1I2O75469 434 aa9.37□□□□□ -0.91
SSBP1-208ENST00000469123 OFD1O75665 1012 aa9.37□□□□□ -0.91
SSBP1-208ENST00000469123 PPP1R37O75864 691 aa9.37□□□□□ -0.91
SSBP1-208ENST00000469123 ZNF202O95125 648 aa9.37□□□□□ -0.91
SSBP1-208ENST00000469123 KIF20AO95235 890 aa9.37□□□□□ -0.91
SSBP1-208ENST00000469123 CTNNB1P35222 781 aa9.37□□□□□ -0.91
SSBP1-208ENST00000469123 GRM5P41594 1212 aa9.37□□□□□ -0.91
SSBP1-208ENST00000469123 ALDH7A1P49419 539 aaKnown RBP9.37□□□□□ -0.91
SSBP1-208ENST00000469123 NDUFA8P51970 172 aa9.37□□□□□ -0.91
SSBP1-208ENST00000469123 RNASELQ05823 741 aaKnown RBP9.37□□□□□ -0.91
SSBP1-208ENST00000469123 GRIK3Q13003 919 aa9.37□□□□□ -0.91
SSBP1-208ENST00000469123 EPC2Q52LR7 807 aa9.37□□□□□ -0.91
SSBP1-208ENST00000469123 CLLU1OSQ5K130 101 aa9.37□□□□□ -0.91
SSBP1-208ENST00000469123 SPOUT1Q5T280 376 aaKnown RBP9.37□□□□□ -0.91
SSBP1-208ENST00000469123 L1TD1Q5T7N2 865 aaKnown RBP9.37□□□□□ -0.91
SSBP1-208ENST00000469123 NT5DC1Q5TFE4 455 aa9.37□□□□□ -0.91
SSBP1-208ENST00000469123 PDE12Q6L8Q7 609 aaKnown RBP9.37□□□□□ -0.91
SSBP1-208ENST00000469123 AGMOQ6ZNB7 445 aa9.37□□□□□ -0.91
SSBP1-208ENST00000469123 TAS1R3Q7RTX0 852 aa9.37□□□□□ -0.91
SSBP1-208ENST00000469123 TMCO2Q7Z6W1 182 aaPredicted RBP9.37□□□□□ -0.91
SSBP1-208ENST00000469123 SMG8Q8ND04 991 aaKnown RBP9.37□□□□□ -0.91
SSBP1-208ENST00000469123 HELQQ8TDG4 1101 aa9.37□□□□□ -0.91
SSBP1-208ENST00000469123 PPP2R3CQ969Q6 453 aa9.37□□□□□ -0.91
SSBP1-208ENST00000469123 PAGE5Q96GU1 130 aa9.37□□□□□ -0.91
SSBP1-208ENST00000469123 TIGD1Q96MW7 591 aa9.37□□□□□ -0.91
SSBP1-208ENST00000469123 ZNF558Q96NG5 402 aa9.37□□□□□ -0.91
SSBP1-208ENST00000469123 GBP4Q96PP9 640 aa9.37□□□□□ -0.91
SSBP1-208ENST00000469123 TMEM175Q9BSA9 504 aa9.37□□□□□ -0.91
SSBP1-208ENST00000469123 TCHPQ9BT92 498 aa9.37□□□□□ -0.91
SSBP1-208ENST00000469123 TARS2Q9BW92 718 aaKnown RBP9.37□□□□□ -0.91
SSBP1-208ENST00000469123 STRA6Q9BX79 667 aa9.37□□□□□ -0.91
SSBP1-208ENST00000469123 EIF2AQ9BY44 585 aaKnown RBP9.37□□□□□ -0.91
SSBP1-208ENST00000469123 GDPD2Q9HCC8 539 aa9.37□□□□□ -0.91
SSBP1-208ENST00000469123 RNF19AQ9NV58 838 aa9.37□□□□□ -0.91
SSBP1-208ENST00000469123 CGNQ9P2M7 1197 aaKnown RBP9.37□□□□□ -0.91
SSBP1-208ENST00000469123 SERTAD1Q9UHV2 236 aa9.37□□□□□ -0.91
SSBP1-208ENST00000469123 STXBP5LQ9Y2K9 1186 aa9.37□□□□□ -0.91
SSBP1-208ENST00000469123 MRPL42Q9Y6G3 142 aaKnown RBP9.37□□□□□ -0.91
SSBP1-208ENST00000469123 TRIP11Q15643 1979 aa9.37□□□□□ -0.91
SSBP1-208ENST00000469123 PRRC2BQ5JSZ5 2229 aaKnown RBP9.36□□□□□ -0.91
SSBP1-208ENST00000469123 KIAA1671Q9BY89 1806 aa9.36□□□□□ -0.91
SSBP1-208ENST00000469123 GOLGA6L22H0YM25 854 aa9.36□□□□□ -0.91
SSBP1-208ENST00000469123 GCNT3O95395 438 aa9.36□□□□□ -0.91
SSBP1-208ENST00000469123 LINC00271P0C7V0 271 aa9.36□□□□□ -0.91
SSBP1-208ENST00000469123 FOSL2P15408 326 aa9.36□□□□□ -0.91
SSBP1-208ENST00000469123 IBSPP21815 317 aaPredicted RBP9.36□□□□□ -0.91
SSBP1-208ENST00000469123 UBE2HP62256 183 aa9.36□□□□□ -0.91
SSBP1-208ENST00000469123 KRT17Q04695 432 aa9.36□□□□□ -0.91
SSBP1-208ENST00000469123 EHHADHQ08426 723 aa9.36□□□□□ -0.91
SSBP1-208ENST00000469123 GRIN2CQ14957 1233 aa9.36□□□□□ -0.91
SSBP1-208ENST00000469123 LONRF3Q496Y0 759 aa9.36□□□□□ -0.91
SSBP1-208ENST00000469123 PAN2Q504Q3 1202 aaKnown RBP9.36□□□□□ -0.91
SSBP1-208ENST00000469123 TIGD5Q53EQ6 642 aa9.36□□□□□ -0.91
SSBP1-208ENST00000469123 FAM26FQ5R3K3 315 aa9.36□□□□□ -0.91
SSBP1-208ENST00000469123 KRBA2Q6ZNG9 492 aa9.36□□□□□ -0.91
SSBP1-208ENST00000469123 CD302Q8IX05 232 aa9.36□□□□□ -0.91
SSBP1-208ENST00000469123 FMR1NBQ8N0W7 255 aaPredicted RBP9.36□□□□□ -0.91
SSBP1-208ENST00000469123 ARNTL2Q8WYA1 636 aa9.36□□□□□ -0.91
SSBP1-208ENST00000469123 ACAP3Q96P50 834 aa9.36□□□□□ -0.91
SSBP1-208ENST00000469123 CDX2Q99626 313 aaPredicted RBP9.36□□□□□ -0.91
SSBP1-208ENST00000469123 CDT1Q9H211 546 aa9.36□□□□□ -0.91
SSBP1-208ENST00000469123 NXF3Q9H4D5 531 aaKnown RBP9.36□□□□□ -0.91
SSBP1-208ENST00000469123 CWH43Q9H720 699 aa9.36□□□□□ -0.91
SSBP1-208ENST00000469123 PLEKHA5Q9HAU0 1116 aa9.36□□□□□ -0.91
SSBP1-208ENST00000469123 POLD4Q9HCU8 107 aa9.36□□□□□ -0.91
SSBP1-208ENST00000469123 TSHZ2Q9NRE2 1034 aa9.36□□□□□ -0.91
SSBP1-208ENST00000469123 TYW1Q9NV66 732 aaKnown RBP9.36□□□□□ -0.91
SSBP1-208ENST00000469123 EXOC1Q9NV70 894 aa9.36□□□□□ -0.91
SSBP1-208ENST00000469123 SLC38A7Q9NVC3 462 aa9.36□□□□□ -0.91
SSBP1-208ENST00000469123 TBC1D13Q9NVG8 400 aa9.36□□□□□ -0.91
SSBP1-208ENST00000469123 ANKFY1Q9P2R3 1169 aa9.36□□□□□ -0.91
SSBP1-208ENST00000469123 PARP2Q9UGN5 583 aa9.36□□□□□ -0.91
SSBP1-208ENST00000469123 PUF60Q9UHX1 559 aaKnown RBP9.36□□□□□ -0.91
SSBP1-208ENST00000469123 STYXL1Q9Y6J8 313 aa9.36□□□□□ -0.91
SSBP1-208ENST00000469123 LAMA2P24043 3122 aaKnown RBP9.36□□□□□ -0.91
SSBP1-208ENST00000469123 MYO7AQ13402 2215 aa9.35□□□□□ -0.91
SSBP1-208ENST00000469123 ARL5CA6NH57 179 aa9.35□□□□□ -0.91
SSBP1-208ENST00000469123 ABLIM1O14639 778 aa9.35□□□□□ -0.91
SSBP1-208ENST00000469123 OGTO15294 1046 aa9.35□□□□□ -0.91
SSBP1-208ENST00000469123 XPOTO43592 962 aaKnown RBP9.35□□□□□ -0.91
SSBP1-208ENST00000469123 NCK2O43639 380 aa9.35□□□□□ -0.91
SSBP1-208ENST00000469123 KINO60870 393 aaKnown RBP9.35□□□□□ -0.91
SSBP1-208ENST00000469123 RECQL4O94761 1208 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms