RNA–Protein interactions for RNA: ENST00000469043.1

SCFD1-205, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-205ENST00000469043 SMAD3P84022 425 aaKnown RBP5.64□□□□□ -1.51
SCFD1-205ENST00000469043 SLC25A3Q00325 362 aa5.64□□□□□ -1.51
SCFD1-205ENST00000469043 ACAP1Q15027 740 aa5.64□□□□□ -1.51
SCFD1-205ENST00000469043 ELAVL1Q15717 326 aaKnown RBP5.64□□□□□ -1.51
SCFD1-205ENST00000469043 DGKDQ16760 1214 aa5.64□□□□□ -1.51
SCFD1-205ENST00000469043 COBLL1Q53SF7 1204 aa5.64□□□□□ -1.51
SCFD1-205ENST00000469043 CATSPEREQ5SY80 951 aa5.64□□□□□ -1.51
SCFD1-205ENST00000469043 CCDC174Q6PII3 467 aa5.64□□□□□ -1.51
SCFD1-205ENST00000469043 ANKRD53Q8N9V6 530 aa5.64□□□□□ -1.51
SCFD1-205ENST00000469043 NEUROD6Q96NK8 337 aa5.64□□□□□ -1.51
SCFD1-205ENST00000469043 TCF25Q9BQ70 676 aa5.64□□□□□ -1.51
SCFD1-205ENST00000469043 GPR87Q9BY21 358 aa5.64□□□□□ -1.51
SCFD1-205ENST00000469043 ZNF69Q9UC07 566 aa5.64□□□□□ -1.51
SCFD1-205ENST00000469043 LUC7L2Q9Y383 392 aaKnown RBP5.64□□□□□ -1.51
SCFD1-205ENST00000469043 XDHP47989 1333 aa5.64□□□□□ -1.51
SCFD1-205ENST00000469043 ANO9A1A5B4 782 aa5.63□□□□□ -1.51
SCFD1-205ENST00000469043 KRT4P19013 534 aa5.63□□□□□ -1.51
SCFD1-205ENST00000469043 POU3F2P20265 443 aaPredicted RBP5.63□□□□□ -1.51
SCFD1-205ENST00000469043 HALP42357 657 aa5.63□□□□□ -1.51
SCFD1-205ENST00000469043 IRF9Q00978 393 aa5.63□□□□□ -1.51
SCFD1-205ENST00000469043 ROM1Q03395 351 aa5.63□□□□□ -1.51
SCFD1-205ENST00000469043 FSTL1Q12841 308 aa5.63□□□□□ -1.51
SCFD1-205ENST00000469043 MINDY4Q4G0A6 757 aa5.63□□□□□ -1.51
SCFD1-205ENST00000469043 GAGE13Q4V321 117 aa5.63□□□□□ -1.51
SCFD1-205ENST00000469043 CC2D1AQ6P1N0 951 aaPredicted RBP5.63□□□□□ -1.51
SCFD1-205ENST00000469043 PCSK4Q6UW60 755 aa5.63□□□□□ -1.51
SCFD1-205ENST00000469043 GSTCDQ8NEC7 633 aa5.63□□□□□ -1.51
SCFD1-205ENST00000469043 USP7Q93009 1102 aa5.63□□□□□ -1.51
SCFD1-205ENST00000469043 NAP1L5Q96NT1 182 aaPredicted RBP5.63□□□□□ -1.51
SCFD1-205ENST00000469043 TTC1Q99614 292 aa5.63□□□□□ -1.51
SCFD1-205ENST00000469043 HERPUD2Q9BSE4 406 aa5.63□□□□□ -1.51
SCFD1-205ENST00000469043 GPRC5BQ9NZH0 403 aa5.63□□□□□ -1.51
SCFD1-205ENST00000469043 MAGEL2Q9UJ55 1249 aa5.63□□□□□ -1.51
SCFD1-205ENST00000469043 RCAN3Q9UKA8 241 aa5.63□□□□□ -1.51
SCFD1-205ENST00000469043 GTF2A1LQ9UNN4 478 aa5.63□□□□□ -1.51
SCFD1-205ENST00000469043 FAM50BQ9Y247 325 aa5.63□□□□□ -1.51
SCFD1-205ENST00000469043 UBE2QL1A1L167 161 aa5.62□□□□□ -1.51
SCFD1-205ENST00000469043 C2orf78A6NCI8 922 aa5.62□□□□□ -1.51
SCFD1-205ENST00000469043 APAF1O14727 1248 aa5.62□□□□□ -1.51
SCFD1-205ENST00000469043 DAPK3O43293 454 aa5.62□□□□□ -1.51
SCFD1-205ENST00000469043 KPNA6O60684 536 aa5.62□□□□□ -1.51
SCFD1-205ENST00000469043 RHOBTB3O94955 611 aa5.62□□□□□ -1.51
SCFD1-205ENST00000469043 PHKG2P15735 406 aa5.62□□□□□ -1.51
SCFD1-205ENST00000469043 BMP5P22003 454 aa5.62□□□□□ -1.51
SCFD1-205ENST00000469043 TOB2Q14106 344 aaPredicted RBP5.62□□□□□ -1.51
SCFD1-205ENST00000469043 SIM2Q14190 667 aaPredicted RBP5.62□□□□□ -1.51
SCFD1-205ENST00000469043 KCTD2Q14681 263 aa5.62□□□□□ -1.51
SCFD1-205ENST00000469043 SAFBQ15424 915 aaKnown RBP eCLIP5.62□□□□□ -1.51
SCFD1-205ENST00000469043 SEPT7Q16181 437 aaKnown RBP5.62□□□□□ -1.51
SCFD1-205ENST00000469043 PTPN21Q16825 1174 aa5.62□□□□□ -1.51
SCFD1-205ENST00000469043 ARHGAP44Q17R89 818 aa5.62□□□□□ -1.51
SCFD1-205ENST00000469043 SLC4A8Q2Y0W8 1093 aa5.62□□□□□ -1.51
SCFD1-205ENST00000469043 FKBP15Q5T1M5 1219 aa5.62□□□□□ -1.51
SCFD1-205ENST00000469043 KRT40Q6A162 431 aa5.62□□□□□ -1.51
SCFD1-205ENST00000469043 FSTL4Q6MZW2 842 aa5.62□□□□□ -1.51
SCFD1-205ENST00000469043 MFSD5Q6N075 450 aa5.62□□□□□ -1.51
SCFD1-205ENST00000469043 RTN4RL1Q86UN2 441 aaPredicted RBP5.62□□□□□ -1.51
SCFD1-205ENST00000469043 ZNF354CQ86Y25 554 aa5.62□□□□□ -1.51
SCFD1-205ENST00000469043 PLA2G15Q8NCC3 412 aa5.62□□□□□ -1.51
SCFD1-205ENST00000469043 C1orf131Q8NDD1 294 aaKnown RBP5.62□□□□□ -1.51
SCFD1-205ENST00000469043 SLC25A43Q8WUT9 341 aaPredicted RBP5.62□□□□□ -1.51
SCFD1-205ENST00000469043 FOXRED1Q96CU9 486 aaPredicted RBP5.62□□□□□ -1.51
SCFD1-205ENST00000469043 SCLT1Q96NL6 688 aa5.62□□□□□ -1.51
SCFD1-205ENST00000469043 GPHA2Q96T91 129 aa5.62□□□□□ -1.51
SCFD1-205ENST00000469043 CDC5LQ99459 802 aaKnown RBP5.62□□□□□ -1.51
SCFD1-205ENST00000469043 NISCHQ9Y2I1 1504 aa5.62□□□□□ -1.51
SCFD1-205ENST00000469043 GOLGA6L6A8MZA4 724 aa5.61□□□□□ -1.51
SCFD1-205ENST00000469043 NEMP1O14524 444 aa5.61□□□□□ -1.51
SCFD1-205ENST00000469043 TIMM44O43615 452 aa5.61□□□□□ -1.51
SCFD1-205ENST00000469043 CCND1P24385 295 aa5.61□□□□□ -1.51
SCFD1-205ENST00000469043 FNTBP49356 437 aa5.61□□□□□ -1.51
SCFD1-205ENST00000469043 SLC6A3Q01959 620 aa5.61□□□□□ -1.51
SCFD1-205ENST00000469043 CHAF1AQ13111 956 aaPredicted RBP5.61□□□□□ -1.51
SCFD1-205ENST00000469043 TMEM177Q53S58 311 aa5.61□□□□□ -1.51
SCFD1-205ENST00000469043 TRIM61Q5EBN2 209 aa5.61□□□□□ -1.51
SCFD1-205ENST00000469043 RABL3Q5HYI8 236 aa5.61□□□□□ -1.51
SCFD1-205ENST00000469043 Q6ZPA2 131 aa5.61□□□□□ -1.51
SCFD1-205ENST00000469043 TOGARAM2Q6ZUX3 1019 aa5.61□□□□□ -1.51
SCFD1-205ENST00000469043 SYNE4Q8N205 404 aa5.61□□□□□ -1.51
SCFD1-205ENST00000469043 IGSF22Q8N9C0 903 aa5.61□□□□□ -1.51
SCFD1-205ENST00000469043 SLC7A14Q8TBB6 771 aa5.61□□□□□ -1.51
SCFD1-205ENST00000469043 SELENOOQ9BVL4 669 aa5.61□□□□□ -1.51
SCFD1-205ENST00000469043 BOCQ9BWV1 1114 aa5.61□□□□□ -1.51
SCFD1-205ENST00000469043 MTFR1LQ9H019 292 aa5.61□□□□□ -1.51
SCFD1-205ENST00000469043 IFT22Q9H7X7 185 aa5.61□□□□□ -1.51
SCFD1-205ENST00000469043 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.61□□□□□ -1.51
SCFD1-205ENST00000469043 IL23AQ9NPF7 189 aa5.61□□□□□ -1.51
SCFD1-205ENST00000469043 PLCB1Q9NQ66 1216 aa5.61□□□□□ -1.51
SCFD1-205ENST00000469043 TNPO3Q9Y5L0 923 aaKnown RBP5.61□□□□□ -1.51
SCFD1-205ENST00000469043 FRMPD2Q68DX3 1309 aaPredicted RBP5.6□□□□□ -1.51
SCFD1-205ENST00000469043 KLRG2A4D1S0 409 aaPredicted RBP5.6□□□□□ -1.51
SCFD1-205ENST00000469043 TCERG1O14776 1098 aaKnown RBP5.6□□□□□ -1.51
SCFD1-205ENST00000469043 OPA1O60313 960 aa5.6□□□□□ -1.51
SCFD1-205ENST00000469043 PIP5K1CO60331 668 aa5.6□□□□□ -1.51
SCFD1-205ENST00000469043 NBNO60934 754 aa5.6□□□□□ -1.51
SCFD1-205ENST00000469043 FAM20BO75063 409 aa5.6□□□□□ -1.51
SCFD1-205ENST00000469043 SNUPNO95149 360 aaKnown RBP5.6□□□□□ -1.51
SCFD1-205ENST00000469043 GCP02774 474 aa5.6□□□□□ -1.51
SCFD1-205ENST00000469043 ZBTB48P10074 688 aaPredicted RBP5.6□□□□□ -1.51
SCFD1-205ENST00000469043 CASP2P42575 452 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms