RNA–Protein interactions for RNA: ENST00000468894.1

XRN1-207, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-207ENST00000468894 RABGGTBP53611 331 aa7.23□□□□□ -1.25
XRN1-207ENST00000468894 EXOSC10Q01780 885 aaKnown RBP7.23□□□□□ -1.25
XRN1-207ENST00000468894 APBB1IPQ7Z5R6 666 aaPredicted RBP7.23□□□□□ -1.25
XRN1-207ENST00000468894 PPM1NQ8N819 430 aa7.23□□□□□ -1.25
XRN1-207ENST00000468894 REPS2Q8NFH8 660 aa7.23□□□□□ -1.25
XRN1-207ENST00000468894 MDGA1Q8NFP4 955 aa7.23□□□□□ -1.25
XRN1-207ENST00000468894 OR7D4Q8NG98 312 aa7.23□□□□□ -1.25
XRN1-207ENST00000468894 CEP95Q96GE4 821 aa7.23□□□□□ -1.25
XRN1-207ENST00000468894 CDC5LQ99459 802 aaKnown RBP7.23□□□□□ -1.25
XRN1-207ENST00000468894 KRTAP9-3Q9BYQ3 159 aa7.23□□□□□ -1.25
XRN1-207ENST00000468894 CPEB1Q9BZB8 566 aaKnown RBP7.23□□□□□ -1.25
XRN1-207ENST00000468894 BCO1Q9HAY6 547 aa7.23□□□□□ -1.25
XRN1-207ENST00000468894 DDX56Q9NY93 547 aaKnown RBP7.23□□□□□ -1.25
XRN1-207ENST00000468894 DNM3Q9UQ16 869 aa7.23□□□□□ -1.25
XRN1-207ENST00000468894 KLHL33A6NCF5 533 aa7.22□□□□□ -1.25
XRN1-207ENST00000468894 WNT10BO00744 389 aa7.22□□□□□ -1.25
XRN1-207ENST00000468894 GSPT1P15170 499 aaKnown RBP7.22□□□□□ -1.25
XRN1-207ENST00000468894 GNAT2P19087 354 aa7.22□□□□□ -1.25
XRN1-207ENST00000468894 SREBF1P36956 1147 aa7.22□□□□□ -1.25
XRN1-207ENST00000468894 APBA1Q02410 837 aa7.22□□□□□ -1.25
XRN1-207ENST00000468894 ODF1Q14990 250 aa7.22□□□□□ -1.25
XRN1-207ENST00000468894 NOMO1Q15155 1222 aa7.22□□□□□ -1.25
XRN1-207ENST00000468894 GJC2Q5T442 439 aaPredicted RBP7.22□□□□□ -1.25
XRN1-207ENST00000468894 FBXO18Q8NFZ0 1043 aa7.22□□□□□ -1.25
XRN1-207ENST00000468894 NRG4Q8WWG1 115 aa7.22□□□□□ -1.25
XRN1-207ENST00000468894 ST8SIA2Q92186 375 aa7.22□□□□□ -1.25
XRN1-207ENST00000468894 GPR20Q99678 358 aa7.22□□□□□ -1.25
XRN1-207ENST00000468894 EPC1Q9H2F5 836 aa7.22□□□□□ -1.25
XRN1-207ENST00000468894 SIK3Q9Y2K2 1263 aa7.22□□□□□ -1.25
XRN1-207ENST00000468894 GIT1Q9Y2X7 761 aa7.22□□□□□ -1.25
XRN1-207ENST00000468894 KRTAP23-1A1A580 65 aa7.21□□□□□ -1.26
XRN1-207ENST00000468894 CYP27B1O15528 508 aa7.21□□□□□ -1.26
XRN1-207ENST00000468894 IPO13O94829 963 aaKnown RBP7.21□□□□□ -1.26
XRN1-207ENST00000468894 SLC6A9P48067 706 aa7.21□□□□□ -1.26
XRN1-207ENST00000468894 SCNN1GP51170 649 aa7.21□□□□□ -1.26
XRN1-207ENST00000468894 MFSD14BQ5SR56 506 aa7.21□□□□□ -1.26
XRN1-207ENST00000468894 HTR3DQ70Z44 454 aa7.21□□□□□ -1.26
XRN1-207ENST00000468894 DOK3Q7L591 496 aa7.21□□□□□ -1.26
XRN1-207ENST00000468894 PNMA8AQ86V59 439 aaPredicted RBP7.21□□□□□ -1.26
XRN1-207ENST00000468894 XYLT1Q86Y38 959 aa7.21□□□□□ -1.26
XRN1-207ENST00000468894 SH3RF3Q8TEJ3 882 aaPredicted RBP7.21□□□□□ -1.26
XRN1-207ENST00000468894 MRFAP1Q9Y605 127 aa7.21□□□□□ -1.26
XRN1-207ENST00000468894 KLRG2A4D1S0 409 aaPredicted RBP7.2□□□□□ -1.26
XRN1-207ENST00000468894 FAM171A2A8MVW0 826 aa7.2□□□□□ -1.26
XRN1-207ENST00000468894 PDGFRBP09619 1106 aa7.2□□□□□ -1.26
XRN1-207ENST00000468894 USP39Q53GS9 565 aaKnown RBP7.2□□□□□ -1.26
XRN1-207ENST00000468894 ANKS6Q68DC2 871 aa7.2□□□□□ -1.26
XRN1-207ENST00000468894 FAM180AQ6UWF9 173 aa7.2□□□□□ -1.26
XRN1-207ENST00000468894 ZNF572Q7Z3I7 529 aaPredicted RBP7.2□□□□□ -1.26
XRN1-207ENST00000468894 SPRED1Q7Z699 444 aa7.2□□□□□ -1.26
XRN1-207ENST00000468894 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.2□□□□□ -1.26
XRN1-207ENST00000468894 OR52N2Q8NGI0 321 aa7.2□□□□□ -1.26
XRN1-207ENST00000468894 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.2□□□□□ -1.26
XRN1-207ENST00000468894 ATXN2LQ8WWM7 1075 aaKnown RBP7.2□□□□□ -1.26
XRN1-207ENST00000468894 DPF2Q92785 391 aa7.2□□□□□ -1.26
XRN1-207ENST00000468894 CPPED1Q9BRF8 314 aaPredicted RBP7.2□□□□□ -1.26
XRN1-207ENST00000468894 PDCD2LQ9BRP1 358 aa7.2□□□□□ -1.26
XRN1-207ENST00000468894 KCNH6Q9H252 994 aa7.2□□□□□ -1.26
XRN1-207ENST00000468894 SPEF1Q9Y4P9 236 aa7.2□□□□□ -1.26
XRN1-207ENST00000468894 ATRNL1Q5VV63 1379 aa7.2□□□□□ -1.26
XRN1-207ENST00000468894 PLSCR1O15162 318 aa7.19□□□□□ -1.26
XRN1-207ENST00000468894 MFAP3LO75121 409 aa7.19□□□□□ -1.26
XRN1-207ENST00000468894 ENDOD1O94919 500 aa7.19□□□□□ -1.26
XRN1-207ENST00000468894 ZRANB2O95218 330 aaKnown RBP eCLIP7.19□□□□□ -1.26
XRN1-207ENST00000468894 HK1P19367 917 aa7.19□□□□□ -1.26
XRN1-207ENST00000468894 GUCY1A2P33402 732 aa7.19□□□□□ -1.26
XRN1-207ENST00000468894 WASP42768 502 aa7.19□□□□□ -1.26
XRN1-207ENST00000468894 FLT3LGP49771 235 aa7.19□□□□□ -1.26
XRN1-207ENST00000468894 NEK2P51955 445 aa7.19□□□□□ -1.26
XRN1-207ENST00000468894 CRHR2Q13324 411 aa7.19□□□□□ -1.26
XRN1-207ENST00000468894 RRP1BQ14684 758 aaKnown RBP7.19□□□□□ -1.26
XRN1-207ENST00000468894 CSRP2Q16527 193 aa7.19□□□□□ -1.26
XRN1-207ENST00000468894 DCAF17Q5H9S7 520 aaPredicted RBP7.19□□□□□ -1.26
XRN1-207ENST00000468894 RNF207Q6ZRF8 634 aa7.19□□□□□ -1.26
XRN1-207ENST00000468894 PDZD4Q76G19 769 aaPredicted RBP7.19□□□□□ -1.26
XRN1-207ENST00000468894 GPRIN1Q7Z2K8 1008 aa7.19□□□□□ -1.26
XRN1-207ENST00000468894 THEMISQ8N1K5 641 aaPredicted RBP7.19□□□□□ -1.26
XRN1-207ENST00000468894 PQLC1Q8N2U9 271 aa7.19□□□□□ -1.26
XRN1-207ENST00000468894 IL17DQ8TAD2 202 aa7.19□□□□□ -1.26
XRN1-207ENST00000468894 EXTL1Q92935 676 aa7.19□□□□□ -1.26
XRN1-207ENST00000468894 PGBD4Q96DM1 585 aa7.19□□□□□ -1.26
XRN1-207ENST00000468894 UHRF1Q96T88 793 aaPredicted RBP7.19□□□□□ -1.26
XRN1-207ENST00000468894 GPR87Q9BY21 358 aa7.19□□□□□ -1.26
XRN1-207ENST00000468894 LDAHQ9H6V9 325 aa7.19□□□□□ -1.26
XRN1-207ENST00000468894 LANCL2Q9NS86 450 aa7.19□□□□□ -1.26
XRN1-207ENST00000468894 SERPINB13Q9UIV8 391 aa7.19□□□□□ -1.26
XRN1-207ENST00000468894 B5MCH6 92 aa7.18□□□□□ -1.26
XRN1-207ENST00000468894 INSRRP14616 1297 aa7.18□□□□□ -1.26
XRN1-207ENST00000468894 ALOX15P16050 662 aaPredicted RBP7.18□□□□□ -1.26
XRN1-207ENST00000468894 PTPN7P35236 360 aa7.18□□□□□ -1.26
XRN1-207ENST00000468894 MAN2A2P49641 1150 aa7.18□□□□□ -1.26
XRN1-207ENST00000468894 EFCAB2Q5VUJ9 269 aa7.18□□□□□ -1.26
XRN1-207ENST00000468894 FAM83AQ86UY5 434 aa7.18□□□□□ -1.26
XRN1-207ENST00000468894 CHMP4CQ96CF2 233 aa7.18□□□□□ -1.26
XRN1-207ENST00000468894 KRTAP4-7Q9BYR0 210 aa7.18□□□□□ -1.26
XRN1-207ENST00000468894 MATN3O15232 486 aa7.17□□□□□ -1.26
XRN1-207ENST00000468894 FPR1P21462 350 aa7.17□□□□□ -1.26
XRN1-207ENST00000468894 PER3P56645 1201 aa7.17□□□□□ -1.26
XRN1-207ENST00000468894 KIF23Q02241 960 aaPredicted RBP7.17□□□□□ -1.26
XRN1-207ENST00000468894 SP140Q13342 867 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms