RNA–Protein interactions for RNA: ENST00000467742.1

TRIM27-204, Transcript of tripartite motif containing 27, humanhuman

TSL 2

Gene TRIM27, Length 541 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-204ENST00000467742 CALM1P0DP23 149 aa5.66□□□□□ -1.5
TRIM27-204ENST00000467742 CALM2P0DP24 149 aa5.66□□□□□ -1.5
TRIM27-204ENST00000467742 CALM3P0DP25 149 aa5.66□□□□□ -1.5
TRIM27-204ENST00000467742 CCL5P13501 91 aa5.66□□□□□ -1.5
TRIM27-204ENST00000467742 PSMA5P28066 241 aa5.66□□□□□ -1.5
TRIM27-204ENST00000467742 HOXA13P31271 388 aaPredicted RBP5.66□□□□□ -1.5
TRIM27-204ENST00000467742 KIF5BP33176 963 aa5.66□□□□□ -1.5
TRIM27-204ENST00000467742 COPB2P35606 906 aa5.66□□□□□ -1.5
TRIM27-204ENST00000467742 IRAK1P51617 712 aa5.66□□□□□ -1.5
TRIM27-204ENST00000467742 ALDH5A1P51649 535 aaPredicted RBP5.66□□□□□ -1.5
TRIM27-204ENST00000467742 HSD17B4P51659 736 aa5.66□□□□□ -1.5
TRIM27-204ENST00000467742 NEK4P51957 841 aa5.66□□□□□ -1.5
TRIM27-204ENST00000467742 RCAN1P53805 252 aa5.66□□□□□ -1.5
TRIM27-204ENST00000467742 PRMT2P55345 433 aa5.66□□□□□ -1.5
TRIM27-204ENST00000467742 RPS6P62753 249 aaKnown RBP5.66□□□□□ -1.5
TRIM27-204ENST00000467742 UBXN2AP68543 259 aa5.66□□□□□ -1.5
TRIM27-204ENST00000467742 KCTD2Q14681 263 aa5.66□□□□□ -1.5
TRIM27-204ENST00000467742 NPY5RQ15761 445 aa5.66□□□□□ -1.5
TRIM27-204ENST00000467742 PKN2Q16513 984 aaKnown RBP5.66□□□□□ -1.5
TRIM27-204ENST00000467742 UBE2SQ16763 222 aa5.66□□□□□ -1.5
TRIM27-204ENST00000467742 TKFCQ3LXA3 575 aa5.66□□□□□ -1.5
TRIM27-204ENST00000467742 PRAMEF19Q5SWL8 479 aa5.66□□□□□ -1.5
TRIM27-204ENST00000467742 ANO1Q5XXA6 986 aa5.66□□□□□ -1.5
TRIM27-204ENST00000467742 OGFOD3Q6PK18 319 aa5.66□□□□□ -1.5
TRIM27-204ENST00000467742 GK5Q6ZS86 529 aa5.66□□□□□ -1.5
TRIM27-204ENST00000467742 ARMCX2Q7L311 632 aa5.66□□□□□ -1.5
TRIM27-204ENST00000467742 CCAR1Q8IX12 1150 aaKnown RBP5.66□□□□□ -1.5
TRIM27-204ENST00000467742 FBXO16Q8IX29 292 aaPredicted RBP5.66□□□□□ -1.5
TRIM27-204ENST00000467742 ANKRD35Q8N283 1001 aa5.66□□□□□ -1.5
TRIM27-204ENST00000467742 OR6P1Q8NGX9 317 aa5.66□□□□□ -1.5
TRIM27-204ENST00000467742 GTF3C6Q969F1 213 aa5.66□□□□□ -1.5
TRIM27-204ENST00000467742 PGBD1Q96JS3 809 aa5.66□□□□□ -1.5
TRIM27-204ENST00000467742 FERD3LQ96RJ6 166 aa5.66□□□□□ -1.5
TRIM27-204ENST00000467742 AMNQ9BXJ7 453 aa5.66□□□□□ -1.5
TRIM27-204ENST00000467742 FOXQ1Q9C009 403 aa5.66□□□□□ -1.5
TRIM27-204ENST00000467742 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.66□□□□□ -1.53e-16■■■□□ 15
TRIM27-204ENST00000467742 ALDH8A1Q9H2A2 487 aaPredicted RBP5.66□□□□□ -1.5
TRIM27-204ENST00000467742 PAK6Q9NQU5 681 aaPredicted RBP5.66□□□□□ -1.5
TRIM27-204ENST00000467742 GJB4Q9NTQ9 266 aa5.66□□□□□ -1.5
TRIM27-204ENST00000467742 RBM28Q9NW13 759 aaKnown RBP5.66□□□□□ -1.5
TRIM27-204ENST00000467742 GMIPQ9P107 970 aa5.66□□□□□ -1.5
TRIM27-204ENST00000467742 CCDC39Q9UFE4 941 aa5.66□□□□□ -1.5
TRIM27-204ENST00000467742 EFR3BQ9Y2G0 817 aa5.66□□□□□ -1.5
TRIM27-204ENST00000467742 CTDP1Q9Y5B0 961 aaPredicted RBP5.66□□□□□ -1.5
TRIM27-204ENST00000467742 PCDHA1Q9Y5I3 950 aa5.66□□□□□ -1.5
TRIM27-204ENST00000467742 CHD9Q3L8U1 2897 aa5.66□□□□□ -1.5
TRIM27-204ENST00000467742 PFASO15067 1338 aa5.66□□□□□ -1.5
TRIM27-204ENST00000467742 MYH9P35579 1960 aaKnown RBP5.66□□□□□ -1.5
TRIM27-204ENST00000467742 LAMA3Q16787 3333 aa5.65□□□□□ -1.5
TRIM27-204ENST00000467742 EYSQ5T1H1 3165 aa5.65□□□□□ -1.5
TRIM27-204ENST00000467742 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.65□□□□□ -1.5
TRIM27-204ENST00000467742 MYADML2A6NDP7 307 aa5.65□□□□□ -1.5
TRIM27-204ENST00000467742 MEIS2O14770 477 aa5.65□□□□□ -1.5
TRIM27-204ENST00000467742 STRNO43815 780 aa5.65□□□□□ -1.5
TRIM27-204ENST00000467742 PFKFB2O60825 505 aa5.65□□□□□ -1.5
TRIM27-204ENST00000467742 CFBP00751 764 aa5.65□□□□□ -1.5
TRIM27-204ENST00000467742 CST3P01034 146 aaPredicted RBP5.65□□□□□ -1.5
TRIM27-204ENST00000467742 FDPSP14324 419 aaKnown RBP5.65□□□□□ -1.5
TRIM27-204ENST00000467742 IFNAR1P17181 557 aa5.65□□□□□ -1.5
TRIM27-204ENST00000467742 EDNRBP24530 442 aa5.65□□□□□ -1.5
TRIM27-204ENST00000467742 CALML3P27482 149 aa5.65□□□□□ -1.5
TRIM27-204ENST00000467742 NASPP49321 788 aaPredicted RBP5.65□□□□□ -1.5
TRIM27-204ENST00000467742 CLCQ05315 142 aa5.65□□□□□ -1.5
TRIM27-204ENST00000467742 SLBPQ14493 270 aaKnown RBP eCLIP5.65□□□□□ -1.5
TRIM27-204ENST00000467742 SF3A1Q15459 793 aaKnown RBP5.65□□□□□ -1.5
TRIM27-204ENST00000467742 CYP27C1Q4G0S4 372 aa5.65□□□□□ -1.5
TRIM27-204ENST00000467742 GJC2Q5T442 439 aaPredicted RBP5.65□□□□□ -1.5
TRIM27-204ENST00000467742 OLFML2BQ68BL8 750 aa5.65□□□□□ -1.5
TRIM27-204ENST00000467742 USP17L6PQ6QN14 398 aa5.65□□□□□ -1.5
TRIM27-204ENST00000467742 MAMDC4Q6UXC1 1216 aa5.65□□□□□ -1.5
TRIM27-204ENST00000467742 RNF207Q6ZRF8 634 aa5.65□□□□□ -1.5
TRIM27-204ENST00000467742 HEATR3Q7Z4Q2 680 aa5.65□□□□□ -1.5
TRIM27-204ENST00000467742 DPP9Q86TI2 863 aa5.65□□□□□ -1.5
TRIM27-204ENST00000467742 SLFN12Q8IYM2 578 aa5.65□□□□□ -1.5
TRIM27-204ENST00000467742 TMTC2Q8N394 836 aa5.65□□□□□ -1.5
TRIM27-204ENST00000467742 RBBP8NLQ8NC74 664 aaPredicted RBP5.65□□□□□ -1.5
TRIM27-204ENST00000467742 NSUN7Q8NE18 718 aaKnown RBP5.65□□□□□ -1.5
TRIM27-204ENST00000467742 SYTL5Q8TDW5 730 aaPredicted RBP5.65□□□□□ -1.5
TRIM27-204ENST00000467742 DIS3LQ8TF46 1054 aaKnown RBP5.65□□□□□ -1.5
TRIM27-204ENST00000467742 ACSF2Q96CM8 615 aaPredicted RBP5.65□□□□□ -1.5
TRIM27-204ENST00000467742 RRP36Q96EU6 259 aaKnown RBP5.65□□□□□ -1.5
TRIM27-204ENST00000467742 ZNF274Q96GC6 653 aaPredicted RBP5.65□□□□□ -1.5
TRIM27-204ENST00000467742 FBXL18Q96ME1 805 aa5.65□□□□□ -1.5
TRIM27-204ENST00000467742 TAAR1Q96RJ0 339 aa5.65□□□□□ -1.5
TRIM27-204ENST00000467742 SLC26A6Q9BXS9 759 aa5.65□□□□□ -1.5
TRIM27-204ENST00000467742 FBRSQ9HAH7 460 aa5.65□□□□□ -1.5
TRIM27-204ENST00000467742 PDGFCQ9NRA1 345 aa5.65□□□□□ -1.5
TRIM27-204ENST00000467742 TMEM260Q9NX78 707 aa5.65□□□□□ -1.5
TRIM27-204ENST00000467742 TJP2Q9UDY2 1190 aa5.65□□□□□ -1.5
TRIM27-204ENST00000467742 FBXO40Q9UH90 709 aa5.65□□□□□ -1.5
TRIM27-204ENST00000467742 CORINQ9Y5Q5 1042 aa5.65□□□□□ -1.5
TRIM27-204ENST00000467742 RPTORQ8N122 1335 aa5.65□□□□□ -1.51
TRIM27-204ENST00000467742 CACNA1AO00555 2505 aa5.64□□□□□ -1.51
TRIM27-204ENST00000467742 CCDC85CA6NKD9 419 aa5.64□□□□□ -1.51
TRIM27-204ENST00000467742 MEIS3P2A8K0S8 358 aa5.64□□□□□ -1.51
TRIM27-204ENST00000467742 ARIH2O95376 493 aa5.64□□□□□ -1.51
TRIM27-204ENST00000467742 SCG2P13521 617 aa5.64□□□□□ -1.51
TRIM27-204ENST00000467742 EN2P19622 333 aaPredicted RBP5.64□□□□□ -1.51
TRIM27-204ENST00000467742 HOXD10P28358 340 aa5.64□□□□□ -1.51
TRIM27-204ENST00000467742 SMARCA1P28370 1054 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms