RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 PPP1R12CQ9BZL4 782 aa7.5□□□□□ -1.21
SCAF4-204ENST00000467731 HAPLN2Q9GZV7 340 aa7.5□□□□□ -1.21
SCAF4-204ENST00000467731 HSD3B7Q9H2F3 369 aa7.5□□□□□ -1.21
SCAF4-204ENST00000467731 PCIF1Q9H4Z3 704 aa7.5□□□□□ -1.21
SCAF4-204ENST00000467731 AGO3Q9H9G7 860 aaKnown RBP7.5□□□□□ -1.21
SCAF4-204ENST00000467731 FANCLQ9NW38 375 aa7.5□□□□□ -1.21
SCAF4-204ENST00000467731 TBX21Q9UL17 535 aa7.5□□□□□ -1.21
SCAF4-204ENST00000467731 CEP83Q9Y592 693 aa7.5□□□□□ -1.21
SCAF4-204ENST00000467731 SMTNL1A8MU46 457 aa7.49□□□□□ -1.21
SCAF4-204ENST00000467731 GOLGA6L19H0YKK7 550 aa7.49□□□□□ -1.21
SCAF4-204ENST00000467731 TULP2O00295 520 aa7.49□□□□□ -1.21
SCAF4-204ENST00000467731 CLDN3O15551 220 aa7.49□□□□□ -1.21
SCAF4-204ENST00000467731 ZNF500O60304 480 aaPredicted RBP7.49□□□□□ -1.21
SCAF4-204ENST00000467731 TOM1L1O75674 476 aa7.49□□□□□ -1.21
SCAF4-204ENST00000467731 CD52P31358 61 aa7.49□□□□□ -1.21
SCAF4-204ENST00000467731 MATR3P43243 847 aaKnown RBP eCLIP7.49□□□□□ -1.21
SCAF4-204ENST00000467731 CYP2J2P51589 502 aa7.49□□□□□ -1.21
SCAF4-204ENST00000467731 NFX1Q12986 1120 aaKnown RBP7.49□□□□□ -1.21
SCAF4-204ENST00000467731 ADAM9Q13443 819 aa7.49□□□□□ -1.21
SCAF4-204ENST00000467731 LPIN1Q14693 890 aa7.49□□□□□ -1.21
SCAF4-204ENST00000467731 TSHZ1Q6ZSZ6 1077 aa7.49□□□□□ -1.21
SCAF4-204ENST00000467731 EP400NLQ6ZTU2 488 aa7.49□□□□□ -1.21
SCAF4-204ENST00000467731 TCHPQ9BT92 498 aa7.49□□□□□ -1.21
SCAF4-204ENST00000467731 AGPAT5Q9NUQ2 364 aa7.49□□□□□ -1.21
SCAF4-204ENST00000467731 TMEM39AQ9NV64 488 aa7.49□□□□□ -1.21
SCAF4-204ENST00000467731 HSPBP1Q9NZL4 362 aa7.49□□□□□ -1.21
SCAF4-204ENST00000467731 PCDH10Q9P2E7 1040 aa7.49□□□□□ -1.21
SCAF4-204ENST00000467731 ST3GAL5Q9UNP4 418 aa7.49□□□□□ -1.21
SCAF4-204ENST00000467731 PIN4Q9Y237 131 aaKnown RBP7.49□□□□□ -1.21
SCAF4-204ENST00000467731 TNFSF13BQ9Y275 285 aa7.49□□□□□ -1.21
SCAF4-204ENST00000467731 R3HCC1Q9Y3T6 440 aaKnown RBP7.49□□□□□ -1.21
SCAF4-204ENST00000467731 A0A1B0GUA9 196 aa7.49□□□□□ -1.21
SCAF4-204ENST00000467731 ABLIM1O14639 778 aa7.49□□□□□ -1.21
SCAF4-204ENST00000467731 HARSP12081 509 aaKnown RBP7.49□□□□□ -1.21
SCAF4-204ENST00000467731 PROZP22891 400 aa7.49□□□□□ -1.21
SCAF4-204ENST00000467731 CCL23P55773 120 aa7.49□□□□□ -1.21
SCAF4-204ENST00000467731 SNRPFP62306 86 aaKnown RBP7.49□□□□□ -1.21
SCAF4-204ENST00000467731 CBX1P83916 185 aa7.49□□□□□ -1.21
SCAF4-204ENST00000467731 ZNF568Q3ZCX4 644 aa7.49□□□□□ -1.21
SCAF4-204ENST00000467731 EEF1DP3Q658K8 133 aa7.49□□□□□ -1.21
SCAF4-204ENST00000467731 ZC3H3Q8IXZ2 948 aaKnown RBP7.49□□□□□ -1.21
SCAF4-204ENST00000467731 SAAL1Q96ER3 474 aa7.49□□□□□ -1.21
SCAF4-204ENST00000467731 SCLYQ96I15 445 aa7.49□□□□□ -1.21
SCAF4-204ENST00000467731 WNT8AQ9H1J5 351 aa7.49□□□□□ -1.21
SCAF4-204ENST00000467731 PDZD7Q9H5P4 517 aa7.49□□□□□ -1.21
SCAF4-204ENST00000467731 PTPRHQ9HD43 1115 aa7.49□□□□□ -1.21
SCAF4-204ENST00000467731 PRDM5Q9NQX1 630 aaPredicted RBP7.49□□□□□ -1.21
SCAF4-204ENST00000467731 PADI3Q9ULW8 664 aa7.49□□□□□ -1.21
SCAF4-204ENST00000467731 STYXL1Q9Y6J8 313 aa7.49□□□□□ -1.21
SCAF4-204ENST00000467731 ANK1P16157 1881 aa7.49□□□□□ -1.21
SCAF4-204ENST00000467731 TNRC18O15417 2968 aaPredicted RBP7.49□□□□□ -1.21
SCAF4-204ENST00000467731 CCDC85CA6NKD9 419 aa7.48□□□□□ -1.21
SCAF4-204ENST00000467731 CETN3O15182 167 aa7.48□□□□□ -1.21
SCAF4-204ENST00000467731 AKAP3O75969 853 aa7.48□□□□□ -1.21
SCAF4-204ENST00000467731 ATP1A3P13637 1013 aa7.48□□□□□ -1.21
SCAF4-204ENST00000467731 GARTP22102 1010 aa7.48□□□□□ -1.21
SCAF4-204ENST00000467731 RPL13P26373 211 aaKnown RBP7.48□□□□□ -1.21
SCAF4-204ENST00000467731 CYP2C18P33260 490 aa7.48□□□□□ -1.21
SCAF4-204ENST00000467731 CASP4P49662 377 aa7.48□□□□□ -1.21
SCAF4-204ENST00000467731 MCL1Q07820 350 aa7.48□□□□□ -1.21
SCAF4-204ENST00000467731 NCBP1Q09161 790 aaKnown RBP7.48□□□□□ -1.21
SCAF4-204ENST00000467731 PAK2Q13177 524 aa7.48□□□□□ -1.21
SCAF4-204ENST00000467731 NOLC1Q14978 699 aaKnown RBP eCLIP7.48□□□□□ -1.212e-7■■□□□ 13.6
SCAF4-204ENST00000467731 NFIL3Q16649 462 aa7.48□□□□□ -1.21
SCAF4-204ENST00000467731 CEP135Q66GS9 1140 aa7.48□□□□□ -1.21
SCAF4-204ENST00000467731 SLFN12LQ6IEE8 588 aa7.48□□□□□ -1.21
SCAF4-204ENST00000467731 NOTUMQ6P988 496 aa7.48□□□□□ -1.21
SCAF4-204ENST00000467731 MPZL3Q6UWV2 235 aa7.48□□□□□ -1.21
SCAF4-204ENST00000467731 ZBTB33Q86T24 672 aa7.48□□□□□ -1.21
SCAF4-204ENST00000467731 IRF2BP1Q8IU81 584 aa7.48□□□□□ -1.21
SCAF4-204ENST00000467731 SLC9A9Q8IVB4 645 aa7.48□□□□□ -1.21
SCAF4-204ENST00000467731 C12orf56Q8IXR9 622 aa7.48□□□□□ -1.21
SCAF4-204ENST00000467731 RDH13Q8NBN7 331 aa7.48□□□□□ -1.21
SCAF4-204ENST00000467731 NOC3LQ8WTT2 800 aaKnown RBP7.48□□□□□ -1.21
SCAF4-204ENST00000467731 ZBTB9Q96C00 473 aa7.48□□□□□ -1.21
SCAF4-204ENST00000467731 MYCBPQ99417 103 aaPredicted RBP7.48□□□□□ -1.21
SCAF4-204ENST00000467731 IFIH1Q9BYX4 1025 aaKnown RBP7.48□□□□□ -1.21
SCAF4-204ENST00000467731 DMAC2Q9NW81 257 aa7.48□□□□□ -1.21
SCAF4-204ENST00000467731 SQORQ9Y6N5 450 aa7.48□□□□□ -1.21
SCAF4-204ENST00000467731 A0A0B4J269 797 aa7.48□□□□□ -1.21
SCAF4-204ENST00000467731 GOLGA8IPA6NC78 632 aa7.48□□□□□ -1.21
SCAF4-204ENST00000467731 TRIM43BA6NCK2 446 aa7.48□□□□□ -1.21
SCAF4-204ENST00000467731 GOLGA8JA6NMD2 632 aa7.48□□□□□ -1.21
SCAF4-204ENST00000467731 GPR182O15218 404 aa7.48□□□□□ -1.21
SCAF4-204ENST00000467731 EXOC3O60645 756 aa7.48□□□□□ -1.21
SCAF4-204ENST00000467731 NBNO60934 754 aa7.48□□□□□ -1.21
SCAF4-204ENST00000467731 ZNF18P17022 549 aa7.48□□□□□ -1.21
SCAF4-204ENST00000467731 ITGB8P26012 769 aa7.48□□□□□ -1.21
SCAF4-204ENST00000467731 GPNMBQ14956 572 aa7.48□□□□□ -1.21
SCAF4-204ENST00000467731 SEZ6Q53EL9 994 aa7.48□□□□□ -1.21
SCAF4-204ENST00000467731 CDKAL1Q5VV42 579 aa7.48□□□□□ -1.21
SCAF4-204ENST00000467731 ZSCAN30Q86W11 494 aa7.48□□□□□ -1.21
SCAF4-204ENST00000467731 CREBRFQ8IUR6 639 aa7.48□□□□□ -1.21
SCAF4-204ENST00000467731 USP38Q8NB14 1042 aa7.48□□□□□ -1.21
SCAF4-204ENST00000467731 XXYLT1Q8NBI6 393 aa7.48□□□□□ -1.21
SCAF4-204ENST00000467731 TMEM174Q8WUU8 243 aa7.48□□□□□ -1.21
SCAF4-204ENST00000467731 TRIM43Q96BQ3 446 aaPredicted RBP7.48□□□□□ -1.21
SCAF4-204ENST00000467731 ADPGKQ9BRR6 497 aa7.48□□□□□ -1.21
SCAF4-204ENST00000467731 MSTO1Q9BUK6 570 aa7.48□□□□□ -1.21
SCAF4-204ENST00000467731 CDT1Q9H211 546 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms