RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 ALDH5A1P51649 535 aaPredicted RBP5.12□□□□□ -1.59
VPS13A-209ENST00000467124 ZNF280AP59817 542 aaPredicted RBP5.12□□□□□ -1.59
VPS13A-209ENST00000467124 RAB1AP62820 205 aa5.12□□□□□ -1.59
VPS13A-209ENST00000467124 CHAF1AQ13111 956 aaPredicted RBP5.12□□□□□ -1.59
VPS13A-209ENST00000467124 STK3Q13188 491 aa5.12□□□□□ -1.59
VPS13A-209ENST00000467124 NOGQ13253 232 aa5.12□□□□□ -1.59
VPS13A-209ENST00000467124 MORC3Q14149 939 aa5.12□□□□□ -1.59
VPS13A-209ENST00000467124 VPS72Q15906 364 aa5.12□□□□□ -1.59
VPS13A-209ENST00000467124 GRAMD1BQ3KR37 738 aa5.12□□□□□ -1.59
VPS13A-209ENST00000467124 CIAPIN1Q6FI81 312 aa5.12□□□□□ -1.59
VPS13A-209ENST00000467124 APOA5Q6Q788 366 aa5.12□□□□□ -1.59
VPS13A-209ENST00000467124 LARP4Q71RC2 724 aaKnown RBP eCLIP5.12□□□□□ -1.59
VPS13A-209ENST00000467124 GPR155Q7Z3F1 870 aa5.12□□□□□ -1.59
VPS13A-209ENST00000467124 HEATR3Q7Z4Q2 680 aa5.12□□□□□ -1.59
VPS13A-209ENST00000467124 LIX1LQ8IVB5 337 aa5.12□□□□□ -1.59
VPS13A-209ENST00000467124 IFNL2Q8IZJ0 200 aa5.12□□□□□ -1.59
VPS13A-209ENST00000467124 FAM43AQ8N2R8 423 aa5.12□□□□□ -1.59
VPS13A-209ENST00000467124 PQLC1Q8N2U9 271 aa5.12□□□□□ -1.59
VPS13A-209ENST00000467124 ZCCHC14Q8WYQ9 949 aaKnown RBP5.12□□□□□ -1.59
VPS13A-209ENST00000467124 GJA10Q969M2 543 aa5.12□□□□□ -1.59
VPS13A-209ENST00000467124 CCDC138Q96M89 665 aa5.12□□□□□ -1.59
VPS13A-209ENST00000467124 UIMC1Q96RL1 719 aa5.12□□□□□ -1.59
VPS13A-209ENST00000467124 DMRTA2Q96SC8 542 aa5.12□□□□□ -1.59
VPS13A-209ENST00000467124 OSBPL6Q9BZF3 934 aa5.12□□□□□ -1.59
VPS13A-209ENST00000467124 RSAD1Q9HA92 442 aa5.12□□□□□ -1.59
VPS13A-209ENST00000467124 ATP6V0A4Q9HBG4 840 aa5.12□□□□□ -1.59
VPS13A-209ENST00000467124 NLRC4Q9NPP4 1024 aa5.12□□□□□ -1.59
VPS13A-209ENST00000467124 LMBRD1Q9NUN5 540 aa5.12□□□□□ -1.59
VPS13A-209ENST00000467124 ABCF2Q9UG63 623 aa5.12□□□□□ -1.59
VPS13A-209ENST00000467124 RUVBL1Q9Y265 456 aaKnown RBP5.12□□□□□ -1.59
VPS13A-209ENST00000467124 PCDHA1Q9Y5I3 950 aa5.12□□□□□ -1.59
VPS13A-209ENST00000467124 CFAP20Q9Y6A4 193 aaKnown RBP5.12□□□□□ -1.59
VPS13A-209ENST00000467124 IFRD1O00458 451 aaPredicted RBP5.11□□□□□ -1.59
VPS13A-209ENST00000467124 GOLIM4O00461 696 aa5.11□□□□□ -1.59
VPS13A-209ENST00000467124 DDX3XO00571 662 aaKnown RBP eCLIP5.11□□□□□ -1.59
VPS13A-209ENST00000467124 FOSP01100 380 aaPredicted RBP5.11□□□□□ -1.59
VPS13A-209ENST00000467124 HMGCRP04035 888 aa5.11□□□□□ -1.59
VPS13A-209ENST00000467124 COL6A1P12109 1028 aa5.11□□□□□ -1.59
VPS13A-209ENST00000467124 ZNF28P17035 718 aa5.11□□□□□ -1.59
VPS13A-209ENST00000467124 RPL13P26373 211 aaKnown RBP5.11□□□□□ -1.59
VPS13A-209ENST00000467124 ETV4P43268 484 aa5.11□□□□□ -1.59
VPS13A-209ENST00000467124 AGFG1P52594 562 aaKnown RBP5.11□□□□□ -1.59
VPS13A-209ENST00000467124 PLS1Q14651 629 aa5.11□□□□□ -1.59
VPS13A-209ENST00000467124 PRR31Q5SQ13 230 aa5.11□□□□□ -1.59
VPS13A-209ENST00000467124 FAM83BQ5T0W9 1011 aa5.11□□□□□ -1.59
VPS13A-209ENST00000467124 MCTP1Q6DN14 999 aa5.11□□□□□ -1.59
VPS13A-209ENST00000467124 GADL1Q6ZQY3 521 aa5.11□□□□□ -1.59
VPS13A-209ENST00000467124 MAEAQ7L5Y9 396 aa5.11□□□□□ -1.59
VPS13A-209ENST00000467124 TTC7BQ86TV6 843 aa5.11□□□□□ -1.59
VPS13A-209ENST00000467124 RTKN2Q8IZC4 609 aa5.11□□□□□ -1.59
VPS13A-209ENST00000467124 ADGRG2Q8IZP9 1017 aa5.11□□□□□ -1.59
VPS13A-209ENST00000467124 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.11□□□□□ -1.59
VPS13A-209ENST00000467124 PPP1R14CQ8TAE6 165 aa5.11□□□□□ -1.59
VPS13A-209ENST00000467124 NSUN6Q8TEA1 469 aaKnown RBP5.11□□□□□ -1.59
VPS13A-209ENST00000467124 HOXB13Q92826 284 aaPredicted RBP5.11□□□□□ -1.59
VPS13A-209ENST00000467124 NKD2Q969F2 451 aaPredicted RBP5.11□□□□□ -1.59
VPS13A-209ENST00000467124 EVI5LQ96CN4 794 aa5.11□□□□□ -1.59
VPS13A-209ENST00000467124 SLC35A4Q96G79 324 aa5.11□□□□□ -1.59
VPS13A-209ENST00000467124 CDK5RAP3Q96JB5 506 aa5.11□□□□□ -1.59
VPS13A-209ENST00000467124 FAM84AQ96KN4 292 aa5.11□□□□□ -1.59
VPS13A-209ENST00000467124 PLCB1Q9NQ66 1216 aa5.11□□□□□ -1.59
VPS13A-209ENST00000467124 PCDHA6Q9UN73 950 aa5.11□□□□□ -1.59
VPS13A-209ENST00000467124 RBM8AQ9Y5S9 174 aaKnown RBP5.11□□□□□ -1.59
VPS13A-209ENST00000467124 SNX13Q9Y5W8 968 aa5.11□□□□□ -1.59
VPS13A-209ENST00000467124 USP19O94966 1318 aa5.11□□□□□ -1.59
VPS13A-209ENST00000467124 RPTORQ8N122 1335 aa5.11□□□□□ -1.59
VPS13A-209ENST00000467124 RHPN2P1A8MT19 583 aa5.1□□□□□ -1.59
VPS13A-209ENST00000467124 FAM171A2A8MVW0 826 aa5.1□□□□□ -1.59
VPS13A-209ENST00000467124 F5H423 210 aaPredicted RBP5.1□□□□□ -1.59
VPS13A-209ENST00000467124 NCK2O43639 380 aa5.1□□□□□ -1.59
VPS13A-209ENST00000467124 MGEA5O60502 916 aa5.1□□□□□ -1.59
VPS13A-209ENST00000467124 ALDH1A2O94788 518 aa5.1□□□□□ -1.59
VPS13A-209ENST00000467124 FARP2O94887 1054 aaPredicted RBP5.1□□□□□ -1.59
VPS13A-209ENST00000467124 FSBPO95073 299 aa5.1□□□□□ -1.59
VPS13A-209ENST00000467124 HRGP04196 525 aa5.1□□□□□ -1.59
VPS13A-209ENST00000467124 AMY1AP04745 511 aa5.1□□□□□ -1.59
VPS13A-209ENST00000467124 ZKSCAN1P17029 563 aaPredicted RBP5.1□□□□□ -1.59
VPS13A-209ENST00000467124 FPR1P21462 350 aa5.1□□□□□ -1.59
VPS13A-209ENST00000467124 POLD1P28340 1107 aa5.1□□□□□ -1.59
VPS13A-209ENST00000467124 IL13P35225 146 aa5.1□□□□□ -1.59
VPS13A-209ENST00000467124 HTR3AP46098 478 aa5.1□□□□□ -1.59
VPS13A-209ENST00000467124 HK3P52790 923 aa5.1□□□□□ -1.59
VPS13A-209ENST00000467124 CACNB3P54284 484 aa5.1□□□□□ -1.59
VPS13A-209ENST00000467124 SNAPC2Q13487 334 aa5.1□□□□□ -1.59
VPS13A-209ENST00000467124 TRIM14Q14142 442 aa5.1□□□□□ -1.59
VPS13A-209ENST00000467124 EIF4HQ15056 248 aaKnown RBP5.1□□□□□ -1.59
VPS13A-209ENST00000467124 PCOLCEQ15113 449 aa5.1□□□□□ -1.59
VPS13A-209ENST00000467124 ANO1Q5XXA6 986 aa5.1□□□□□ -1.59
VPS13A-209ENST00000467124 PPP4R3AQ6IN85 833 aa5.1□□□□□ -1.59
VPS13A-209ENST00000467124 ERAP2Q6P179 960 aa5.1□□□□□ -1.59
VPS13A-209ENST00000467124 FAM180AQ6UWF9 173 aa5.1□□□□□ -1.59
VPS13A-209ENST00000467124 TOGARAM2Q6ZUX3 1019 aa5.1□□□□□ -1.59
VPS13A-209ENST00000467124 SAPCD2Q86UD0 394 aa5.1□□□□□ -1.59
VPS13A-209ENST00000467124 UNC5BQ8IZJ1 945 aa5.1□□□□□ -1.59
VPS13A-209ENST00000467124 C3orf20Q8ND61 904 aa5.1□□□□□ -1.59
VPS13A-209ENST00000467124 ACRBPQ8NEB7 543 aa5.1□□□□□ -1.59
VPS13A-209ENST00000467124 FNIP1Q8TF40 1166 aa5.1□□□□□ -1.59
VPS13A-209ENST00000467124 FBXO41Q8TF61 875 aa5.1□□□□□ -1.59
VPS13A-209ENST00000467124 SNX33Q8WV41 574 aa5.1□□□□□ -1.59
VPS13A-209ENST00000467124 POF1BQ8WVV4 589 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms