RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 MIER1Q8N108 512 aa14.33□□□□□ -0.12
UBR4-210ENST00000466969 STAG2Q8N3U4 1231 aa14.33□□□□□ -0.12
UBR4-210ENST00000466969 FAM200AQ8TCP9 573 aa14.33□□□□□ -0.12
UBR4-210ENST00000466969 ZNF668Q96K58 619 aaPredicted RBP14.33□□□□□ -0.12
UBR4-210ENST00000466969 SDF4Q9BRK5 362 aa14.33□□□□□ -0.12
UBR4-210ENST00000466969 CHST7Q9NS84 486 aa14.33□□□□□ -0.12
UBR4-210ENST00000466969 MARCH5Q9NX47 278 aa14.33□□□□□ -0.12
UBR4-210ENST00000466969 SLC8A2Q9UPR5 921 aa14.33□□□□□ -0.12
UBR4-210ENST00000466969 TEX15Q9BXT5 2789 aa14.33□□□□□ -0.12
UBR4-210ENST00000466969 A0A087WV48 116 aa14.32□□□□□ -0.12
UBR4-210ENST00000466969 ZNF263O14978 683 aa14.32□□□□□ -0.12
UBR4-210ENST00000466969 EXTL3O43909 919 aa14.32□□□□□ -0.12
UBR4-210ENST00000466969 DARSP14868 501 aaKnown RBP14.32□□□□□ -0.12
UBR4-210ENST00000466969 PSMC3P17980 439 aa14.32□□□□□ -0.12
UBR4-210ENST00000466969 RAB27AP51159 221 aa14.32□□□□□ -0.12
UBR4-210ENST00000466969 MLLT6P55198 1093 aaPredicted RBP14.32□□□□□ -0.12
UBR4-210ENST00000466969 IRX4P78413 519 aa14.32□□□□□ -0.12
UBR4-210ENST00000466969 CFHR1Q03591 330 aa14.32□□□□□ -0.12
UBR4-210ENST00000466969 LMAN2Q12907 356 aa14.32□□□□□ -0.12
UBR4-210ENST00000466969 USP41Q3LFD5 358 aa14.32□□□□□ -0.12
UBR4-210ENST00000466969 VPS53Q5VIR6 699 aa14.32□□□□□ -0.12
UBR4-210ENST00000466969 SYNPOQ8N3V7 929 aa14.32□□□□□ -0.12
UBR4-210ENST00000466969 CSGALNACT1Q8TDX6 532 aa14.32□□□□□ -0.12
UBR4-210ENST00000466969 FAM105AQ9NUU6 356 aa14.32□□□□□ -0.12
UBR4-210ENST00000466969 HCFC1R1Q9NWW0 138 aa14.32□□□□□ -0.12
UBR4-210ENST00000466969 MYO9AB2RTY4 2548 aa14.31□□□□□ -0.12
UBR4-210ENST00000466969 PATE3B3GLJ2 98 aa14.31□□□□□ -0.12
UBR4-210ENST00000466969 POMCP01189 267 aa14.31□□□□□ -0.12
UBR4-210ENST00000466969 GBP1P32455 592 aa14.31□□□□□ -0.12
UBR4-210ENST00000466969 MAPK8P45983 427 aa14.31□□□□□ -0.12
UBR4-210ENST00000466969 KPNA1P52294 538 aaPredicted RBP14.31□□□□□ -0.12
UBR4-210ENST00000466969 ALX1Q15699 326 aa14.31□□□□□ -0.12
UBR4-210ENST00000466969 PIP4P1Q86T03 277 aa14.31□□□□□ -0.12
UBR4-210ENST00000466969 SCUBE3Q8IX30 993 aa14.31□□□□□ -0.12
UBR4-210ENST00000466969 CKAP2LQ8IYA6 745 aa14.31□□□□□ -0.12
UBR4-210ENST00000466969 GPR65Q8IYL9 337 aa14.31□□□□□ -0.12
UBR4-210ENST00000466969 B3GALT6Q96L58 329 aa14.31□□□□□ -0.12
UBR4-210ENST00000466969 PIGSQ96S52 555 aa14.31□□□□□ -0.12
UBR4-210ENST00000466969 RNF41Q9H4P4 317 aaPredicted RBP14.31□□□□□ -0.12
UBR4-210ENST00000466969 C8orf33Q9H7E9 229 aaPredicted RBP14.31□□□□□ -0.12
UBR4-210ENST00000466969 DNMT3BQ9UBC3 853 aaKnown RBP14.31□□□□□ -0.12
UBR4-210ENST00000466969 PCDHB15Q9Y5E8 787 aa14.31□□□□□ -0.12
UBR4-210ENST00000466969 UPK3BL1B0FP48 263 aa14.3□□□□□ -0.12
UBR4-210ENST00000466969 ZBTB42B2RXF5 422 aa14.3□□□□□ -0.12
UBR4-210ENST00000466969 UPK3BL2E5RIL1 263 aa14.3□□□□□ -0.12
UBR4-210ENST00000466969 MAGEB2O15479 319 aa14.3□□□□□ -0.12
UBR4-210ENST00000466969 ZNF623O75123 536 aa14.3□□□□□ -0.12
UBR4-210ENST00000466969 NR1I2O75469 434 aa14.3□□□□□ -0.12
UBR4-210ENST00000466969 FGAP02671 866 aa14.3□□□□□ -0.12
UBR4-210ENST00000466969 POU2F2P09086 479 aa14.3□□□□□ -0.12
UBR4-210ENST00000466969 FCARP24071 287 aa14.3□□□□□ -0.12
UBR4-210ENST00000466969 HAND2P61296 217 aa14.3□□□□□ -0.12
UBR4-210ENST00000466969 USP17L6PQ6QN14 398 aa14.3□□□□□ -0.12
UBR4-210ENST00000466969 PIP4K2CQ8TBX8 421 aa14.3□□□□□ -0.12
UBR4-210ENST00000466969 DEPDC1BQ8WUY9 529 aa14.3□□□□□ -0.12
UBR4-210ENST00000466969 NLRP7Q8WX94 980 aa14.3□□□□□ -0.12
UBR4-210ENST00000466969 LRRCC1Q9C099 1032 aa14.3□□□□□ -0.12
UBR4-210ENST00000466969 RSAD1Q9HA92 442 aa14.3□□□□□ -0.12
UBR4-210ENST00000466969 DKK4Q9UBT3 224 aa14.3□□□□□ -0.12
UBR4-210ENST00000466969 PIN4Q9Y237 131 aaKnown RBP14.3□□□□□ -0.12
UBR4-210ENST00000466969 UBIAD1Q9Y5Z9 338 aa14.3□□□□□ -0.12
UBR4-210ENST00000466969 NUP205Q92621 2012 aa14.3□□□□□ -0.12
UBR4-210ENST00000466969 COL4A2P08572 1712 aa14.29□□□□□ -0.12
UBR4-210ENST00000466969 PNMA6FA0A0J9YX94 578 aa14.29□□□□□ -0.12
UBR4-210ENST00000466969 CCDC194A0A1B0GVG4 234 aa14.29□□□□□ -0.12
UBR4-210ENST00000466969 MEFVO15553 781 aaPredicted RBP14.29□□□□□ -0.12
UBR4-210ENST00000466969 EFEMP2O95967 443 aa14.29□□□□□ -0.12
UBR4-210ENST00000466969 GPC3P51654 580 aa14.29□□□□□ -0.12
UBR4-210ENST00000466969 SEMA3BQ13214 749 aa14.29□□□□□ -0.12
UBR4-210ENST00000466969 HNRNPDQ14103 355 aaKnown RBP14.29□□□□□ -0.12
UBR4-210ENST00000466969 EFCAB12Q6NXP0 572 aa14.29□□□□□ -0.12
UBR4-210ENST00000466969 AGMOQ6ZNB7 445 aa14.29□□□□□ -0.12
UBR4-210ENST00000466969 CYP2U1Q7Z449 544 aa14.29□□□□□ -0.12
UBR4-210ENST00000466969 HDDC3Q8N4P3 179 aa14.29□□□□□ -0.12
UBR4-210ENST00000466969 SLC7A14Q8TBB6 771 aa14.29□□□□□ -0.12
UBR4-210ENST00000466969 ADAMTS14Q8WXS8 1223 aa14.29□□□□□ -0.12
UBR4-210ENST00000466969 NUSAP1Q9BXS6 441 aaKnown RBP14.29□□□□□ -0.12
UBR4-210ENST00000466969 ZNF302Q9NR11 478 aa14.29□□□□□ -0.12
UBR4-210ENST00000466969 CEP131Q9UPN4 1083 aa14.29□□□□□ -0.12
UBR4-210ENST00000466969 IGKV6D-21A0A0A0MT36 114 aa14.28□□□□□ -0.12
UBR4-210ENST00000466969 B4E1Z4 1266 aa14.28□□□□□ -0.12
UBR4-210ENST00000466969 DCLK1O15075 740 aa14.28□□□□□ -0.12
UBR4-210ENST00000466969 ANP32CO43423 234 aa14.28□□□□□ -0.12
UBR4-210ENST00000466969 CSDE1O75534 798 aaKnown RBP14.28□□□□□ -0.12
UBR4-210ENST00000466969 NFASCO94856 1347 aa14.28□□□□□ -0.12
UBR4-210ENST00000466969 ATG7O95352 703 aa14.28□□□□□ -0.12
UBR4-210ENST00000466969 WISP1O95388 367 aa14.28□□□□□ -0.12
UBR4-210ENST00000466969 SFPQP23246 707 aaKnown RBP eCLIP14.28□□□□□ -0.12
UBR4-210ENST00000466969 AFF1P51825 1210 aaKnown RBP14.28□□□□□ -0.12
UBR4-210ENST00000466969 FAM193AP78312 1265 aa14.28□□□□□ -0.12
UBR4-210ENST00000466969 FAM78AQ5JUQ0 283 aa14.28□□□□□ -0.12
UBR4-210ENST00000466969 TSHZ3Q63HK5 1081 aa14.28□□□□□ -0.12
UBR4-210ENST00000466969 VITQ6UXI7 678 aa14.28□□□□□ -0.12
UBR4-210ENST00000466969 TRMT1LQ7Z2T5 733 aaKnown RBP14.28□□□□□ -0.12
UBR4-210ENST00000466969 CAMKK1Q8N5S9 505 aa14.28□□□□□ -0.12
UBR4-210ENST00000466969 COLEC11Q9BWP8 271 aa14.28□□□□□ -0.12
UBR4-210ENST00000466969 NOTCH4Q99466 2003 aa14.27□□□□□ -0.12
UBR4-210ENST00000466969 CNTNAP2Q9UHC6 1331 aa14.27□□□□□ -0.12
UBR4-210ENST00000466969 SLC38A8A6NNN8 435 aa14.27□□□□□ -0.13
UBR4-210ENST00000466969 PYCARD-AS1I3L0S3 204 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms