RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 GOLGA5Q8TBA6 731 aa17.5■□□□□ 0.39
GPC1-207ENST00000466624 TMEM174Q8WUU8 243 aa17.5■□□□□ 0.39
GPC1-207ENST00000466624 PGBD4Q96DM1 585 aa17.5■□□□□ 0.39
GPC1-207ENST00000466624 TCHPQ9BT92 498 aa17.5■□□□□ 0.39
GPC1-207ENST00000466624 ANKFY1Q9P2R3 1169 aa17.5■□□□□ 0.39
GPC1-207ENST00000466624 IPPQ9Y573 584 aa17.5■□□□□ 0.39
GPC1-207ENST00000466624 COL4A6Q14031 1691 aa17.5■□□□□ 0.39
GPC1-207ENST00000466624 GBF1Q92538 1859 aa17.5■□□□□ 0.39
GPC1-207ENST00000466624 A0A0B4J269 797 aa17.49■□□□□ 0.39
GPC1-207ENST00000466624 ANKRD63C9JTQ0 380 aa17.49■□□□□ 0.39
GPC1-207ENST00000466624 PDXKO00764 312 aa17.49■□□□□ 0.39
GPC1-207ENST00000466624 KIAA0391O15091 583 aaKnown RBP17.49■□□□□ 0.39
GPC1-207ENST00000466624 TGFB1I1O43294 461 aa17.49■□□□□ 0.39
GPC1-207ENST00000466624 HOXA2O43364 376 aa17.49■□□□□ 0.39
GPC1-207ENST00000466624 BMP6P22004 513 aa17.49■□□□□ 0.39
GPC1-207ENST00000466624 STIM1Q13586 685 aa17.49■□□□□ 0.39
GPC1-207ENST00000466624 HS2ST1Q7LGA3 356 aa17.49■□□□□ 0.39
GPC1-207ENST00000466624 NELFCDQ8IXH7 590 aa17.49■□□□□ 0.39
GPC1-207ENST00000466624 C12orf56Q8IXR9 622 aa17.49■□□□□ 0.39
GPC1-207ENST00000466624 ADSSL1Q8N142 457 aa17.49■□□□□ 0.39
GPC1-207ENST00000466624 ZBTB45Q96K62 511 aaPredicted RBP17.49■□□□□ 0.39
GPC1-207ENST00000466624 KCTD10Q9H3F6 313 aa17.49■□□□□ 0.39
GPC1-207ENST00000466624 UBN1Q9NPG3 1134 aa17.49■□□□□ 0.39
GPC1-207ENST00000466624 TYW1Q9NV66 732 aaKnown RBP17.49■□□□□ 0.39
GPC1-207ENST00000466624 LRFN2Q9ULH4 789 aa17.49■□□□□ 0.39
GPC1-207ENST00000466624 PCDHB7Q9Y5E2 793 aa17.49■□□□□ 0.39
GPC1-207ENST00000466624 PDCD11Q14690 1871 aaKnown RBP17.48■□□□□ 0.39
GPC1-207ENST00000466624 BIN1O00499 593 aa17.48■□□□□ 0.39
GPC1-207ENST00000466624 ATP2A2P16615 1042 aaKnown RBP17.48■□□□□ 0.39
GPC1-207ENST00000466624 ADSSP30520 456 aa17.48■□□□□ 0.39
GPC1-207ENST00000466624 GRM5P41594 1212 aa17.48■□□□□ 0.39
GPC1-207ENST00000466624 PRCPP42785 496 aa17.48■□□□□ 0.39
GPC1-207ENST00000466624 NFIL3Q16649 462 aa17.48■□□□□ 0.39
GPC1-207ENST00000466624 CAVIN1Q6NZI2 390 aaKnown RBP17.48■□□□□ 0.39
GPC1-207ENST00000466624 SMYD4Q8IYR2 804 aaPredicted RBP17.48■□□□□ 0.39
GPC1-207ENST00000466624 HAPLN2Q9GZV7 340 aa17.48■□□□□ 0.39
GPC1-207ENST00000466624 NXF3Q9H4D5 531 aaKnown RBP17.48■□□□□ 0.39
GPC1-207ENST00000466624 AGPAT3Q9NRZ7 376 aa17.48■□□□□ 0.39
GPC1-207ENST00000466624 TRAF3IP3Q9Y228 551 aa17.48■□□□□ 0.39
GPC1-207ENST00000466624 TRIP11Q15643 1979 aa17.48■□□□□ 0.39
GPC1-207ENST00000466624 TDRD15B5MCY1 1934 aaKnown RBP17.47■□□□□ 0.39
GPC1-207ENST00000466624 TISP43B9A030 160 aa17.47■□□□□ 0.39
GPC1-207ENST00000466624 OGTO15294 1046 aa17.47■□□□□ 0.39
GPC1-207ENST00000466624 FAM189A1O60320 539 aa17.47■□□□□ 0.39
GPC1-207ENST00000466624 LETM1O95202 739 aaPredicted RBP17.47■□□□□ 0.39
GPC1-207ENST00000466624 GJB5O95377 273 aa17.47■□□□□ 0.39
GPC1-207ENST00000466624 LDHAP00338 332 aaKnown RBP17.47■□□□□ 0.39
GPC1-207ENST00000466624 ITGA4P13612 1032 aa17.47■□□□□ 0.39
GPC1-207ENST00000466624 MATR3P43243 847 aaKnown RBP eCLIP17.47■□□□□ 0.39
GPC1-207ENST00000466624 HTRA4P83105 476 aaPredicted RBP17.47■□□□□ 0.39
GPC1-207ENST00000466624 POU5F1Q01860 360 aaKnown RBP17.47■□□□□ 0.39
GPC1-207ENST00000466624 MYBPC2Q14324 1141 aa17.47■□□□□ 0.39
GPC1-207ENST00000466624 HSP90AA2PQ14568 343 aaPredicted RBP17.47■□□□□ 0.39
GPC1-207ENST00000466624 ISM2Q6H9L7 571 aa17.47■□□□□ 0.39
GPC1-207ENST00000466624 ARMCX5Q6P1M9 558 aa17.47■□□□□ 0.39
GPC1-207ENST00000466624 FOXR2Q6PJQ5 311 aa17.47■□□□□ 0.39
GPC1-207ENST00000466624 ZBTB33Q86T24 672 aa17.47■□□□□ 0.39
GPC1-207ENST00000466624 HERC6Q8IVU3 1022 aa17.47■□□□□ 0.39
GPC1-207ENST00000466624 MLKLQ8NB16 471 aa17.47■□□□□ 0.39
GPC1-207ENST00000466624 POMGNT1Q8WZA1 660 aa17.47■□□□□ 0.39
GPC1-207ENST00000466624 DHTKD1Q96HY7 919 aaPredicted RBP17.47■□□□□ 0.39
GPC1-207ENST00000466624 MSTO1Q9BUK6 570 aa17.47■□□□□ 0.39
GPC1-207ENST00000466624 IKZF4Q9H2S9 585 aa17.47■□□□□ 0.39
GPC1-207ENST00000466624 RC3H2Q9HBD1 1191 aaKnown RBP17.47■□□□□ 0.39
GPC1-207ENST00000466624 MAPK8IP1Q9UQF2 711 aa17.47■□□□□ 0.39
GPC1-207ENST00000466624 GIT1Q9Y2X7 761 aa17.47■□□□□ 0.39
GPC1-207ENST00000466624 ANK1P16157 1881 aa17.47■□□□□ 0.39
GPC1-207ENST00000466624 PPP1R3GB7ZBB8 358 aa17.46■□□□□ 0.39
GPC1-207ENST00000466624 PSMA7O14818 248 aa17.46■□□□□ 0.39
GPC1-207ENST00000466624 INPPL1O15357 1258 aa17.46■□□□□ 0.39
GPC1-207ENST00000466624 CALUO43852 315 aaPredicted RBP17.46■□□□□ 0.39
GPC1-207ENST00000466624 DGKIO75912 1065 aa17.46■□□□□ 0.39
GPC1-207ENST00000466624 NLRP12P59046 1061 aa17.46■□□□□ 0.39
GPC1-207ENST00000466624 ZCWPW2Q504Y3 356 aa17.46■□□□□ 0.39
GPC1-207ENST00000466624 CENPPQ6IPU0 288 aa17.46■□□□□ 0.39
GPC1-207ENST00000466624 AGMOQ6ZNB7 445 aa17.46■□□□□ 0.39
GPC1-207ENST00000466624 SLC9A9Q8IVB4 645 aa17.46■□□□□ 0.39
GPC1-207ENST00000466624 ZNF689Q96CS4 500 aaPredicted RBP17.46■□□□□ 0.39
GPC1-207ENST00000466624 CCDC94Q9BW85 323 aaPredicted RBP17.46■□□□□ 0.39
GPC1-207ENST00000466624 RSAD1Q9HA92 442 aa17.46■□□□□ 0.39
GPC1-207ENST00000466624 RNF19AQ9NV58 838 aa17.46■□□□□ 0.39
GPC1-207ENST00000466624 AGO2Q9UKV8 859 aaKnown RBP17.46■□□□□ 0.39
GPC1-207ENST00000466624 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.45■□□□□ 0.38
GPC1-207ENST00000466624 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.45■□□□□ 0.38
GPC1-207ENST00000466624 UPP2O95045 317 aa17.45■□□□□ 0.38
GPC1-207ENST00000466624 CLTAP09496 248 aa17.45■□□□□ 0.38
GPC1-207ENST00000466624 CD44P16070 742 aaKnown RBP17.45■□□□□ 0.38
GPC1-207ENST00000466624 CCNE1P24864 410 aa17.45■□□□□ 0.38
GPC1-207ENST00000466624 LRRC63Q05C16 580 aa17.45■□□□□ 0.38
GPC1-207ENST00000466624 EDRF1Q3B7T1 1238 aa17.45■□□□□ 0.38
GPC1-207ENST00000466624 CT47A1Q5JQC4 288 aaPredicted RBP17.45■□□□□ 0.38
GPC1-207ENST00000466624 THNSL1Q8IYQ7 743 aa17.45■□□□□ 0.38
GPC1-207ENST00000466624 CEP120Q8N960 986 aa17.45■□□□□ 0.38
GPC1-207ENST00000466624 CBWD1Q9BRT8 395 aa17.45■□□□□ 0.38
GPC1-207ENST00000466624 TMEM117Q9H0C3 514 aa17.45■□□□□ 0.38
GPC1-207ENST00000466624 KIAA1586Q9HCI6 787 aa17.45■□□□□ 0.38
GPC1-207ENST00000466624 TOPORSQ9NS56 1045 aaPredicted RBP17.45■□□□□ 0.38
GPC1-207ENST00000466624 SNTG2Q9NY99 539 aa17.45■□□□□ 0.38
GPC1-207ENST00000466624 DACH1Q9UI36 760 aa17.45■□□□□ 0.38
GPC1-207ENST00000466624 CPSF3Q9UKF6 684 aaKnown RBP17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms