RNA–Protein interactions for RNA: ENST00000466415.1

VPS16-206, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS16, Length 708 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-206ENST00000466415 PTPN21Q16825 1174 aa13.21□□□□□ -0.29
VPS16-206ENST00000466415 PPFIBP1Q86W92 1011 aa13.21□□□□□ -0.29
VPS16-206ENST00000466415 CBWD2Q8IUF1 395 aa13.21□□□□□ -0.29
VPS16-206ENST00000466415 CCDC155Q8N6L0 562 aa13.21□□□□□ -0.29
VPS16-206ENST00000466415 U2AF1L4Q8WU68 220 aaKnown RBP13.21□□□□□ -0.29
VPS16-206ENST00000466415 CPB2Q96IY4 423 aa13.21□□□□□ -0.29
VPS16-206ENST00000466415 MMRN2Q9H8L6 949 aa13.21□□□□□ -0.29
VPS16-206ENST00000466415 RBAKQ9NYW8 714 aaPredicted RBP13.21□□□□□ -0.29
VPS16-206ENST00000466415 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.21□□□□□ -0.29
VPS16-206ENST00000466415 EVPLQ92817 2033 aa13.21□□□□□ -0.29
VPS16-206ENST00000466415 TTLL13PA6NNM8 815 aa13.2□□□□□ -0.3
VPS16-206ENST00000466415 OGTO15294 1046 aa13.2□□□□□ -0.3
VPS16-206ENST00000466415 N4BP1O75113 896 aaKnown RBP13.2□□□□□ -0.3
VPS16-206ENST00000466415 CAND2O75155 1236 aa13.2□□□□□ -0.3
VPS16-206ENST00000466415 SGPL1O95470 568 aa13.2□□□□□ -0.3
VPS16-206ENST00000466415 IQCF3P0C7M6 154 aa13.2□□□□□ -0.3
VPS16-206ENST00000466415 TRIM49P0CI25 452 aa13.2□□□□□ -0.3
VPS16-206ENST00000466415 TRIM49CP0CI26 452 aa13.2□□□□□ -0.3
VPS16-206ENST00000466415 MCF2P10911 925 aa13.2□□□□□ -0.3
VPS16-206ENST00000466415 ARF4P18085 180 aaPredicted RBP13.2□□□□□ -0.3
VPS16-206ENST00000466415 AXLP30530 894 aa13.2□□□□□ -0.3
VPS16-206ENST00000466415 GSDMDP57764 484 aa13.2□□□□□ -0.3
VPS16-206ENST00000466415 MYL7Q01449 175 aa13.2□□□□□ -0.3
VPS16-206ENST00000466415 CYP24A1Q07973 514 aa13.2□□□□□ -0.3
VPS16-206ENST00000466415 CETN1Q12798 172 aa13.2□□□□□ -0.3
VPS16-206ENST00000466415 SYCP1Q15431 976 aa13.2□□□□□ -0.3
VPS16-206ENST00000466415 AMHR2Q16671 573 aa13.2□□□□□ -0.3
VPS16-206ENST00000466415 DCAF4L1Q3SXM0 396 aa13.2□□□□□ -0.3
VPS16-206ENST00000466415 EEF1DP3Q658K8 133 aa13.2□□□□□ -0.3
VPS16-206ENST00000466415 NOTUMQ6P988 496 aa13.2□□□□□ -0.3
VPS16-206ENST00000466415 RPAINQ86UA6 219 aa13.2□□□□□ -0.3
VPS16-206ENST00000466415 CDR2LQ86X02 465 aaPredicted RBP13.2□□□□□ -0.3
VPS16-206ENST00000466415 ZSWIM2Q8NEG5 633 aa13.2□□□□□ -0.3
VPS16-206ENST00000466415 FBXL18Q96ME1 805 aa13.2□□□□□ -0.3
VPS16-206ENST00000466415 FNBP1Q96RU3 617 aa13.2□□□□□ -0.3
VPS16-206ENST00000466415 CDT1Q9H211 546 aa13.2□□□□□ -0.3
VPS16-206ENST00000466415 PDZD7Q9H5P4 517 aa13.2□□□□□ -0.3
VPS16-206ENST00000466415 CDHR5Q9HBB8 845 aa13.2□□□□□ -0.3
VPS16-206ENST00000466415 MROH7Q68CQ1 1323 aa13.19□□□□□ -0.3
VPS16-206ENST00000466415 TLR3O15455 904 aaKnown RBP13.19□□□□□ -0.3
VPS16-206ENST00000466415 B4GALT4O60513 344 aa13.19□□□□□ -0.3
VPS16-206ENST00000466415 RPS6KA5O75582 802 aa13.19□□□□□ -0.3
VPS16-206ENST00000466415 PROZP22891 400 aa13.19□□□□□ -0.3
VPS16-206ENST00000466415 ACOT2P49753 483 aa13.19□□□□□ -0.3
VPS16-206ENST00000466415 ENPEPQ07075 957 aa13.19□□□□□ -0.3
VPS16-206ENST00000466415 KYAT1Q16773 422 aa13.19□□□□□ -0.3
VPS16-206ENST00000466415 THNSL1Q8IYQ7 743 aa13.19□□□□□ -0.3
VPS16-206ENST00000466415 SLC43A3Q8NBI5 491 aa13.19□□□□□ -0.3
VPS16-206ENST00000466415 CCDC150Q8NCX0 1101 aa13.19□□□□□ -0.3
VPS16-206ENST00000466415 TMC2Q8TDI7 906 aa13.19□□□□□ -0.3
VPS16-206ENST00000466415 WNT8BQ93098 351 aa13.19□□□□□ -0.3
VPS16-206ENST00000466415 SLC35C1Q96A29 364 aa13.19□□□□□ -0.3
VPS16-206ENST00000466415 CCDC127Q96BQ5 260 aa13.19□□□□□ -0.3
VPS16-206ENST00000466415 BORCS6Q96GS4 357 aa13.19□□□□□ -0.3
VPS16-206ENST00000466415 MFSD14AQ96MC6 490 aa13.19□□□□□ -0.3
VPS16-206ENST00000466415 ERGIC2Q96RQ1 377 aa13.19□□□□□ -0.3
VPS16-206ENST00000466415 TMEM106CQ9BVX2 250 aa13.19□□□□□ -0.3
VPS16-206ENST00000466415 TRIM6Q9C030 488 aaPredicted RBP13.19□□□□□ -0.3
VPS16-206ENST00000466415 SENP6Q9GZR1 1112 aaPredicted RBP13.19□□□□□ -0.3
VPS16-206ENST00000466415 HAPLN2Q9GZV7 340 aa13.19□□□□□ -0.3
VPS16-206ENST00000466415 CRISPLD2Q9H0B8 497 aa13.19□□□□□ -0.3
VPS16-206ENST00000466415 TRPV6Q9H1D0 765 aa13.19□□□□□ -0.3
VPS16-206ENST00000466415 AGPAT5Q9NUQ2 364 aa13.19□□□□□ -0.3
VPS16-206ENST00000466415 PIN4Q9Y237 131 aaKnown RBP13.19□□□□□ -0.3
VPS16-206ENST00000466415 NRDCO43847 1150 aa13.18□□□□□ -0.3
VPS16-206ENST00000466415 NPTXRO95502 500 aa13.18□□□□□ -0.3
VPS16-206ENST00000466415 DLATP10515 647 aaKnown RBP13.18□□□□□ -0.3
VPS16-206ENST00000466415 TRIM21P19474 475 aaKnown RBP13.18□□□□□ -0.3
VPS16-206ENST00000466415 PBX1P40424 430 aa13.18□□□□□ -0.3
VPS16-206ENST00000466415 FMO5P49326 533 aa13.18□□□□□ -0.3
VPS16-206ENST00000466415 MXI1P50539 228 aa13.18□□□□□ -0.3
VPS16-206ENST00000466415 MGAT3Q09327 533 aa13.18□□□□□ -0.3
VPS16-206ENST00000466415 PSMD6Q15008 389 aa13.18□□□□□ -0.3
VPS16-206ENST00000466415 SURF1Q15526 300 aa13.18□□□□□ -0.3
VPS16-206ENST00000466415 SLC27A1Q6PCB7 646 aa13.18□□□□□ -0.3
VPS16-206ENST00000466415 GBP6Q6ZN66 633 aa13.18□□□□□ -0.3
VPS16-206ENST00000466415 CCDC186Q7Z3E2 898 aa13.18□□□□□ -0.3
VPS16-206ENST00000466415 BRSK2Q8IWQ3 736 aa13.18□□□□□ -0.3
VPS16-206ENST00000466415 NEK11Q8NG66 645 aa13.18□□□□□ -0.3
VPS16-206ENST00000466415 IQCDQ96DY2 449 aa13.18□□□□□ -0.3
VPS16-206ENST00000466415 CCDC51Q96ER9 411 aa13.18□□□□□ -0.3
VPS16-206ENST00000466415 NUP58Q9BVL2 599 aa13.18□□□□□ -0.3
VPS16-206ENST00000466415 LSM14BQ9BX40 385 aaKnown RBP13.18□□□□□ -0.3
VPS16-206ENST00000466415 RPF1Q9H9Y2 349 aaKnown RBP13.18□□□□□ -0.3
VPS16-206ENST00000466415 PTPRHQ9HD43 1115 aa13.18□□□□□ -0.3
VPS16-206ENST00000466415 A0A1B0GUA9 196 aa13.17□□□□□ -0.3
VPS16-206ENST00000466415 LRRIQ3A6PVS8 624 aaPredicted RBP13.17□□□□□ -0.3
VPS16-206ENST00000466415 ABLIM1O14639 778 aa13.17□□□□□ -0.3
VPS16-206ENST00000466415 TNNI1P19237 187 aa13.17□□□□□ -0.3
VPS16-206ENST00000466415 OSTNP61366 133 aa13.17□□□□□ -0.3
VPS16-206ENST00000466415 NFX1Q12986 1120 aaKnown RBP13.17□□□□□ -0.3
VPS16-206ENST00000466415 PAK2Q13177 524 aa13.17□□□□□ -0.3
VPS16-206ENST00000466415 BFSP2Q13515 415 aa13.17□□□□□ -0.3
VPS16-206ENST00000466415 EXOC3L4Q17RC7 722 aa13.17□□□□□ -0.3
VPS16-206ENST00000466415 SEZ6Q53EL9 994 aa13.17□□□□□ -0.3
VPS16-206ENST00000466415 ZBTB41Q5SVQ8 909 aa13.17□□□□□ -0.3
VPS16-206ENST00000466415 FAM228AQ86W67 206 aa13.17□□□□□ -0.3
VPS16-206ENST00000466415 ANKLE1Q8NAG6 615 aa13.17□□□□□ -0.3
VPS16-206ENST00000466415 CAGE1Q8TC20 777 aa13.17□□□□□ -0.3
VPS16-206ENST00000466415 PARD3BQ8TEW8 1205 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms