RNA–Protein interactions for RNA: ENST00000466260.1

RTFDC1-205, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-205ENST00000466260 REEP2Q9BRK0 252 aa10.72□□□□□ -0.69
RTFDC1-205ENST00000466260 ADPGKQ9BRR6 497 aa10.72□□□□□ -0.69
RTFDC1-205ENST00000466260 PLVAPQ9BX97 442 aa10.72□□□□□ -0.69
RTFDC1-205ENST00000466260 CCSER1Q9C0I3 900 aa10.72□□□□□ -0.69
RTFDC1-205ENST00000466260 CCDC113Q9H0I3 377 aa10.72□□□□□ -0.69
RTFDC1-205ENST00000466260 FZD8Q9H461 694 aa10.72□□□□□ -0.69
RTFDC1-205ENST00000466260 PDZD7Q9H5P4 517 aa10.72□□□□□ -0.69
RTFDC1-205ENST00000466260 NSUN3Q9H649 340 aaKnown RBP10.72□□□□□ -0.69
RTFDC1-205ENST00000466260 NRDE2Q9H7Z3 1164 aa10.72□□□□□ -0.69
RTFDC1-205ENST00000466260 SNTG2Q9NY99 539 aa10.72□□□□□ -0.69
RTFDC1-205ENST00000466260 LMCD1Q9NZU5 365 aa10.72□□□□□ -0.69
RTFDC1-205ENST00000466260 DNAJB4Q9UDY4 337 aa10.72□□□□□ -0.69
RTFDC1-205ENST00000466260 GDAQ9Y2T3 454 aa10.72□□□□□ -0.69
RTFDC1-205ENST00000466260 CNTNAP2Q9UHC6 1331 aa10.72□□□□□ -0.69
RTFDC1-205ENST00000466260 K7ENM7 598 aa10.71□□□□□ -0.69
RTFDC1-205ENST00000466260 B4GALT3O60512 393 aa10.71□□□□□ -0.69
RTFDC1-205ENST00000466260 ZNF623O75123 536 aa10.71□□□□□ -0.69
RTFDC1-205ENST00000466260 TBCAO75347 108 aaKnown RBP10.71□□□□□ -0.69
RTFDC1-205ENST00000466260 DDHD2O94830 711 aa10.71□□□□□ -0.69
RTFDC1-205ENST00000466260 PLS3P13797 630 aa10.71□□□□□ -0.69
RTFDC1-205ENST00000466260 POU3F3P20264 500 aaPredicted RBP10.71□□□□□ -0.69
RTFDC1-205ENST00000466260 GTF2F1P35269 517 aaKnown RBP eCLIP10.71□□□□□ -0.69
RTFDC1-205ENST00000466260 MATR3P43243 847 aaKnown RBP eCLIP10.71□□□□□ -0.69
RTFDC1-205ENST00000466260 BCAR1P56945 870 aa10.71□□□□□ -0.69
RTFDC1-205ENST00000466260 OSTNP61366 133 aa10.71□□□□□ -0.69
RTFDC1-205ENST00000466260 PCBP1Q15365 356 aaKnown RBP eCLIP10.71□□□□□ -0.69
RTFDC1-205ENST00000466260 ZNF568Q3ZCX4 644 aa10.71□□□□□ -0.69
RTFDC1-205ENST00000466260 ARSHQ5FYA8 562 aa10.71□□□□□ -0.69
RTFDC1-205ENST00000466260 ATF7IP2Q5U623 682 aa10.71□□□□□ -0.69
RTFDC1-205ENST00000466260 MRPL10Q7Z7H8 261 aaKnown RBP10.71□□□□□ -0.69
RTFDC1-205ENST00000466260 TMEM173Q86WV6 379 aaPredicted RBP10.71□□□□□ -0.69
RTFDC1-205ENST00000466260 ZNF280BQ86YH2 543 aa10.71□□□□□ -0.69
RTFDC1-205ENST00000466260 MYCT1Q8N699 235 aa10.71□□□□□ -0.69
RTFDC1-205ENST00000466260 CNNM3Q8NE01 707 aa10.71□□□□□ -0.69
RTFDC1-205ENST00000466260 SPPL3Q8TCT6 385 aa10.71□□□□□ -0.69
RTFDC1-205ENST00000466260 STAMQ92783 540 aa10.71□□□□□ -0.69
RTFDC1-205ENST00000466260 TMEM169Q96HH4 297 aa10.71□□□□□ -0.69
RTFDC1-205ENST00000466260 TARS2Q9BW92 718 aaKnown RBP10.71□□□□□ -0.69
RTFDC1-205ENST00000466260 TRAIPQ9BWF2 469 aa10.71□□□□□ -0.69
RTFDC1-205ENST00000466260 LMAN2LQ9H0V9 348 aa10.71□□□□□ -0.69
RTFDC1-205ENST00000466260 ENTPD7Q9NQZ7 604 aa10.71□□□□□ -0.69
RTFDC1-205ENST00000466260 MIOSQ9NXC5 875 aa10.71□□□□□ -0.69
RTFDC1-205ENST00000466260 ANKFY1Q9P2R3 1169 aa10.71□□□□□ -0.69
RTFDC1-205ENST00000466260 BOLA1Q9Y3E2 137 aa10.71□□□□□ -0.69
RTFDC1-205ENST00000466260 A0A087X0B3 334 aa10.7□□□□□ -0.7
RTFDC1-205ENST00000466260 A0A1B0GUA9 196 aa10.7□□□□□ -0.7
RTFDC1-205ENST00000466260 ARL5CA6NH57 179 aa10.7□□□□□ -0.7
RTFDC1-205ENST00000466260 ACKR2O00590 384 aa10.7□□□□□ -0.7
RTFDC1-205ENST00000466260 SLC26A4O43511 780 aa10.7□□□□□ -0.7
RTFDC1-205ENST00000466260 YEATS4O95619 227 aa10.7□□□□□ -0.7
RTFDC1-205ENST00000466260 OR1G1P47890 313 aa10.7□□□□□ -0.7
RTFDC1-205ENST00000466260 ME1P48163 572 aa10.7□□□□□ -0.7
RTFDC1-205ENST00000466260 SLC11A1P49279 550 aa10.7□□□□□ -0.7
RTFDC1-205ENST00000466260 ALDH7A1P49419 539 aaKnown RBP10.7□□□□□ -0.7
RTFDC1-205ENST00000466260 KCNQ1P51787 676 aa10.7□□□□□ -0.7
RTFDC1-205ENST00000466260 EFNA5P52803 228 aa10.7□□□□□ -0.7
RTFDC1-205ENST00000466260 SMTNP53814 917 aa10.7□□□□□ -0.7
RTFDC1-205ENST00000466260 ERVFC1P60507 584 aa10.7□□□□□ -0.7
RTFDC1-205ENST00000466260 STRN3Q13033 797 aa10.7□□□□□ -0.7
RTFDC1-205ENST00000466260 CAMK1Q14012 370 aa10.7□□□□□ -0.7
RTFDC1-205ENST00000466260 FAM187BQ17R55 369 aa10.7□□□□□ -0.7
RTFDC1-205ENST00000466260 NAALADL2Q58DX5 795 aa10.7□□□□□ -0.7
RTFDC1-205ENST00000466260 GLRA4Q5JXX5 417 aa10.7□□□□□ -0.7
RTFDC1-205ENST00000466260 NT5DC1Q5TFE4 455 aa10.7□□□□□ -0.7
RTFDC1-205ENST00000466260 TAS1R3Q7RTX0 852 aa10.7□□□□□ -0.7
RTFDC1-205ENST00000466260 SLC39A11Q8N1S5 342 aa10.7□□□□□ -0.7
RTFDC1-205ENST00000466260 CEP120Q8N960 986 aa10.7□□□□□ -0.7
RTFDC1-205ENST00000466260 MRPS27Q92552 414 aaKnown RBP10.7□□□□□ -0.7
RTFDC1-205ENST00000466260 RABGGTAQ92696 567 aa10.7□□□□□ -0.7
RTFDC1-205ENST00000466260 BICD1Q96G01 975 aa10.7□□□□□ -0.7
RTFDC1-205ENST00000466260 TCF25Q9BQ70 676 aa10.7□□□□□ -0.7
RTFDC1-205ENST00000466260 TCHPQ9BT92 498 aa10.7□□□□□ -0.7
RTFDC1-205ENST00000466260 TIPINQ9BVW5 301 aa10.7□□□□□ -0.7
RTFDC1-205ENST00000466260 TLR9Q9NR96 1032 aa10.7□□□□□ -0.7
RTFDC1-205ENST00000466260 WDR70Q9NW82 654 aa10.7□□□□□ -0.7
RTFDC1-205ENST00000466260 CLDND1Q9NY35 253 aa10.7□□□□□ -0.7
RTFDC1-205ENST00000466260 SPG21Q9NZD8 308 aa10.7□□□□□ -0.7
RTFDC1-205ENST00000466260 CACNG4Q9UBN1 327 aa10.7□□□□□ -0.7
RTFDC1-205ENST00000466260 PRG3Q9Y2Y8 225 aaPredicted RBP10.7□□□□□ -0.7
RTFDC1-205ENST00000466260 ANK1P16157 1881 aa10.7□□□□□ -0.7
RTFDC1-205ENST00000466260 REV3LO60673 3130 aa10.69□□□□□ -0.7
RTFDC1-205ENST00000466260 H3BQ06 376 aaPredicted RBP10.69□□□□□ -0.7
RTFDC1-205ENST00000466260 PER2O15055 1255 aa10.69□□□□□ -0.7
RTFDC1-205ENST00000466260 LINC01565O15544 149 aa10.69□□□□□ -0.7
RTFDC1-205ENST00000466260 PPP6R2O75170 966 aa10.69□□□□□ -0.7
RTFDC1-205ENST00000466260 RECQL4O94761 1208 aa10.69□□□□□ -0.7
RTFDC1-205ENST00000466260 BRD1O95696 1058 aa10.69□□□□□ -0.7
RTFDC1-205ENST00000466260 IDEP14735 1019 aa10.69□□□□□ -0.7
RTFDC1-205ENST00000466260 KCNA5P22460 613 aa10.69□□□□□ -0.7
RTFDC1-205ENST00000466260 DDIT3P35638 169 aa10.69□□□□□ -0.7
RTFDC1-205ENST00000466260 PPM1AP35813 382 aa10.69□□□□□ -0.7
RTFDC1-205ENST00000466260 NRIP1P48552 1158 aa10.69□□□□□ -0.7
RTFDC1-205ENST00000466260 KRT17Q04695 432 aa10.69□□□□□ -0.7
RTFDC1-205ENST00000466260 GIT2Q14161 759 aa10.69□□□□□ -0.7
RTFDC1-205ENST00000466260 CLUL1Q15846 466 aa10.69□□□□□ -0.7
RTFDC1-205ENST00000466260 CSPP1Q1MSJ5 1256 aa10.69□□□□□ -0.7
RTFDC1-205ENST00000466260 SEZ6Q53EL9 994 aa10.69□□□□□ -0.7
RTFDC1-205ENST00000466260 CCDC73Q6ZRK6 1079 aa10.69□□□□□ -0.7
RTFDC1-205ENST00000466260 SV2BQ7L1I2 683 aa10.69□□□□□ -0.7
RTFDC1-205ENST00000466260 TMC7Q7Z402 723 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms