RNA–Protein interactions for RNA: ENST00000465950.5

SCAF11-205, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 5,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-205ENST00000465950 DYDC2Q96IM9 177 aa10.1□□□□□ -0.79
SCAF11-205ENST00000465950 RSAD1Q9HA92 442 aa10.1□□□□□ -0.79
SCAF11-205ENST00000465950 RAD18Q9NS91 495 aa10.1□□□□□ -0.79
SCAF11-205ENST00000465950 BTBD19C9JJ37 291 aa10.1□□□□□ -0.79
SCAF11-205ENST00000465950 KLHL41O60662 606 aa10.1□□□□□ -0.79
SCAF11-205ENST00000465950 CYP2D6P10635 497 aa10.1□□□□□ -0.79
SCAF11-205ENST00000465950 CDH18Q13634 790 aa10.1□□□□□ -0.79
SCAF11-205ENST00000465950 PDIA5Q14554 519 aa10.1□□□□□ -0.79
SCAF11-205ENST00000465950 TAF3Q5VWG9 929 aa10.1□□□□□ -0.79
SCAF11-205ENST00000465950 TDRD5Q8NAT2 981 aaKnown RBP10.1□□□□□ -0.79
SCAF11-205ENST00000465950 PBXIP1Q96AQ6 731 aa10.1□□□□□ -0.79
SCAF11-205ENST00000465950 BRD9Q9H8M2 597 aa10.1□□□□□ -0.79
SCAF11-205ENST00000465950 POLMQ9NP87 494 aaPredicted RBP10.1□□□□□ -0.79
SCAF11-205ENST00000465950 ROBO1Q9Y6N7 1651 aa10.1□□□□□ -0.79
SCAF11-205ENST00000465950 GOLGA8JA6NMD2 632 aa10.1□□□□□ -0.79
SCAF11-205ENST00000465950 SDC4P31431 198 aa10.1□□□□□ -0.79
SCAF11-205ENST00000465950 E4F1Q66K89 784 aaPredicted RBP10.1□□□□□ -0.79
SCAF11-205ENST00000465950 KIF18AQ8NI77 898 aa10.1□□□□□ -0.79
SCAF11-205ENST00000465950 ACDQ96AP0 544 aa10.1□□□□□ -0.79
SCAF11-205ENST00000465950 GSDMAQ96QA5 445 aa10.1□□□□□ -0.79
SCAF11-205ENST00000465950 SPON2Q9BUD6 331 aa10.1□□□□□ -0.79
SCAF11-205ENST00000465950 CYP4F11Q9HBI6 524 aa10.1□□□□□ -0.79
SCAF11-205ENST00000465950 EMILIN3Q9NT22 766 aa10.1□□□□□ -0.79
SCAF11-205ENST00000465950 SPACA6W5XKT8 324 aa10.1□□□□□ -0.79
SCAF11-205ENST00000465950 AHDC1Q5TGY3 1603 aaPredicted RBP10.09□□□□□ -0.79
SCAF11-205ENST00000465950 COL1A2P08123 1366 aa10.09□□□□□ -0.79
SCAF11-205ENST00000465950 TRAV19A0A0A6YYK7 116 aa10.09□□□□□ -0.79
SCAF11-205ENST00000465950 GOLGA8MH3BSY2 632 aa10.09□□□□□ -0.79
SCAF11-205ENST00000465950 PPP6R2O75170 966 aa10.09□□□□□ -0.79
SCAF11-205ENST00000465950 RNASE9P60153 205 aaKnown RBP10.09□□□□□ -0.79
SCAF11-205ENST00000465950 GJC2Q5T442 439 aaPredicted RBP10.09□□□□□ -0.79
SCAF11-205ENST00000465950 FBXO16Q8IX29 292 aaPredicted RBP10.09□□□□□ -0.79
SCAF11-205ENST00000465950 UBXN4Q92575 508 aa10.09□□□□□ -0.79
SCAF11-205ENST00000465950 PRIMPOLQ96LW4 560 aa10.09□□□□□ -0.79
SCAF11-205ENST00000465950 CATSPERBQ9H7T0 1116 aa10.09□□□□□ -0.79
SCAF11-205ENST00000465950 NGRNQ9NPE2 291 aaKnown RBP10.09□□□□□ -0.79
SCAF11-205ENST00000465950 DDX56Q9NY93 547 aaKnown RBP10.09□□□□□ -0.79
SCAF11-205ENST00000465950 RBAKQ9NYW8 714 aaPredicted RBP10.09□□□□□ -0.79
SCAF11-205ENST00000465950 SEPT10Q9P0V9 454 aa10.09□□□□□ -0.79
SCAF11-205ENST00000465950 ILF2Q12905 390 aaKnown RBP10.09□□□□□ -0.79
SCAF11-205ENST00000465950 GSE1Q14687 1217 aa10.09□□□□□ -0.79
SCAF11-205ENST00000465950 SGSM1Q2NKQ1 1148 aa10.09□□□□□ -0.79
SCAF11-205ENST00000465950 FAM46CQ5VWP2 391 aa10.09□□□□□ -0.79
SCAF11-205ENST00000465950 LRRC4BQ9NT99 713 aa10.09□□□□□ -0.79
SCAF11-205ENST00000465950 FAM217BQ9NTX9 383 aaPredicted RBP10.09□□□□□ -0.79
SCAF11-205ENST00000465950 GUCY2CP25092 1073 aa10.09□□□□□ -0.79
SCAF11-205ENST00000465950 ACTR2P61160 394 aa10.09□□□□□ -0.79
SCAF11-205ENST00000465950 PKN1Q16512 942 aa10.09□□□□□ -0.79
SCAF11-205ENST00000465950 SPC24Q8NBT2 197 aa10.09□□□□□ -0.79
SCAF11-205ENST00000465950 PCDHB15Q9Y5E8 787 aa10.09□□□□□ -0.79
SCAF11-205ENST00000465950 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.09□□□□□ -0.79
SCAF11-205ENST00000465950 PVALEFA0A1B0GWK0 134 aa10.09□□□□□ -0.79
SCAF11-205ENST00000465950 FAM47E-STBD1D6RA91 191 aa10.09□□□□□ -0.79
SCAF11-205ENST00000465950 MCF2LO15068 1137 aa10.09□□□□□ -0.79
SCAF11-205ENST00000465950 SUN1O94901 812 aa10.09□□□□□ -0.79
SCAF11-205ENST00000465950 MMP1P03956 469 aa10.09□□□□□ -0.79
SCAF11-205ENST00000465950 ZNF177Q13360 481 aaPredicted RBP10.09□□□□□ -0.79
SCAF11-205ENST00000465950 TMCO4Q5TGY1 634 aa10.09□□□□□ -0.79
SCAF11-205ENST00000465950 OLFML2BQ68BL8 750 aa10.09□□□□□ -0.79
SCAF11-205ENST00000465950 CNKSR3Q6P9H4 555 aa10.09□□□□□ -0.79
SCAF11-205ENST00000465950 BANK1Q8NDB2 785 aa10.09□□□□□ -0.79
SCAF11-205ENST00000465950 LSM14BQ9BX40 385 aaKnown RBP10.09□□□□□ -0.79
SCAF11-205ENST00000465950 SRRTQ9BXP5 876 aaKnown RBP10.09□□□□□ -0.79
SCAF11-205ENST00000465950 BCO2Q9BYV7 579 aa10.09□□□□□ -0.79
SCAF11-205ENST00000465950 TMEM260Q9NX78 707 aa10.09□□□□□ -0.79
SCAF11-205ENST00000465950 AMFRQ9UKV5 643 aa10.09□□□□□ -0.79
SCAF11-205ENST00000465950 ZNF541Q9H0D2 1346 aa10.08□□□□□ -0.8
SCAF11-205ENST00000465950 hCG_1642624A0A1W2PR95 340 aa10.08□□□□□ -0.8
SCAF11-205ENST00000465950 H7C0C1 242 aa10.08□□□□□ -0.8
SCAF11-205ENST00000465950 C2CD2LO14523 706 aa10.08□□□□□ -0.8
SCAF11-205ENST00000465950 B3GAT3O94766 335 aa10.08□□□□□ -0.8
SCAF11-205ENST00000465950 BAIAP3O94812 1187 aa10.08□□□□□ -0.8
SCAF11-205ENST00000465950 FBXO21O94952 628 aa10.08□□□□□ -0.8
SCAF11-205ENST00000465950 ATP5OP48047 213 aa10.08□□□□□ -0.8
SCAF11-205ENST00000465950 USP4Q13107 963 aa10.08□□□□□ -0.8
SCAF11-205ENST00000465950 C10orf76Q5T2E6 689 aa10.08□□□□□ -0.8
SCAF11-205ENST00000465950 B3GALNT2Q8NCR0 500 aa10.08□□□□□ -0.8
SCAF11-205ENST00000465950 CCNYQ8ND76 341 aa10.08□□□□□ -0.8
SCAF11-205ENST00000465950 SUSD6Q92537 303 aa10.08□□□□□ -0.8
SCAF11-205ENST00000465950 BACH2Q9BYV9 841 aa10.08□□□□□ -0.8
SCAF11-205ENST00000465950 GPM6BQ13491 265 aa10.08□□□□□ -0.8
SCAF11-205ENST00000465950 PTPN14Q15678 1187 aa10.08□□□□□ -0.8
SCAF11-205ENST00000465950 PROM2Q8N271 834 aa10.08□□□□□ -0.8
SCAF11-205ENST00000465950 SLC32A1Q9H598 525 aa10.08□□□□□ -0.8
SCAF11-205ENST00000465950 ZSWIM6Q9HCJ5 1215 aa10.08□□□□□ -0.8
SCAF11-205ENST00000465950 TLR8Q9NR97 1041 aaKnown RBP10.08□□□□□ -0.8
SCAF11-205ENST00000465950 SLC13A4Q9UKG4 626 aa10.08□□□□□ -0.8
SCAF11-205ENST00000465950 ITM2BQ9Y287 266 aa10.08□□□□□ -0.8
SCAF11-205ENST00000465950 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.08□□□□□ -0.8
SCAF11-205ENST00000465950 OPA1O60313 960 aa10.08□□□□□ -0.8
SCAF11-205ENST00000465950 LGR5O75473 907 aa10.08□□□□□ -0.8
SCAF11-205ENST00000465950 ADH1CP00326 375 aa10.08□□□□□ -0.8
SCAF11-205ENST00000465950 BRAFP15056 766 aa10.08□□□□□ -0.8
SCAF11-205ENST00000465950 VEGFBP49765 207 aa10.08□□□□□ -0.8
SCAF11-205ENST00000465950 COPB1P53618 953 aaKnown RBP10.08□□□□□ -0.8
SCAF11-205ENST00000465950 HNRNPH2P55795 449 aaKnown RBP10.08□□□□□ -0.8
SCAF11-205ENST00000465950 SNAP25P60880 206 aa10.08□□□□□ -0.8
SCAF11-205ENST00000465950 AP1B1Q10567 949 aa10.08□□□□□ -0.8
SCAF11-205ENST00000465950 LRMPQ12912 555 aa10.08□□□□□ -0.8
SCAF11-205ENST00000465950 SDCCAG8Q86SQ7 713 aaPredicted RBP10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms