RNA–Protein interactions for RNA: ENST00000465721.1

CNOT4-208, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 4

Gene CNOT4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-208ENST00000465721 TGM5O43548 720 aa13.14□□□□□ -0.31
CNOT4-208ENST00000465721 C1RP00736 705 aa13.14□□□□□ -0.31
CNOT4-208ENST00000465721 LAMP2P13473 410 aa13.14□□□□□ -0.31
CNOT4-208ENST00000465721 GLULP15104 373 aa13.14□□□□□ -0.31
CNOT4-208ENST00000465721 RFC5P40937 340 aa13.14□□□□□ -0.31
CNOT4-208ENST00000465721 SPECC1Q5M775 1068 aa13.14□□□□□ -0.31
CNOT4-208ENST00000465721 FERMT3Q86UX7 667 aa13.14□□□□□ -0.31
CNOT4-208ENST00000465721 KIAA2013Q8IYS2 634 aa13.14□□□□□ -0.31
CNOT4-208ENST00000465721 RNF149Q8NC42 400 aa13.14□□□□□ -0.31
CNOT4-208ENST00000465721 PJA1Q8NG27 643 aa13.14□□□□□ -0.31
CNOT4-208ENST00000465721 CCDC51Q96ER9 411 aa13.14□□□□□ -0.31
CNOT4-208ENST00000465721 LXNQ9BS40 222 aa13.14□□□□□ -0.31
CNOT4-208ENST00000465721 PLEKHA4Q9H4M7 779 aa13.14□□□□□ -0.31
CNOT4-208ENST00000465721 UBN1Q9NPG3 1134 aa13.14□□□□□ -0.31
CNOT4-208ENST00000465721 SLC2A4RGQ9NR83 387 aa13.14□□□□□ -0.31
CNOT4-208ENST00000465721 ZDHHC7Q9NXF8 308 aa13.14□□□□□ -0.31
CNOT4-208ENST00000465721 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.14□□□□□ -0.31
CNOT4-208ENST00000465721 HES2Q9Y543 173 aa13.14□□□□□ -0.31
CNOT4-208ENST00000465721 RALGAPA1Q6GYQ0 2036 aa13.13□□□□□ -0.31
CNOT4-208ENST00000465721 POTEMA6NI47 508 aa13.13□□□□□ -0.31
CNOT4-208ENST00000465721 GAS2O43903 313 aaKnown RBP13.13□□□□□ -0.31
CNOT4-208ENST00000465721 ERLIN2O94905 339 aa13.13□□□□□ -0.31
CNOT4-208ENST00000465721 SP9P0CG40 484 aa13.13□□□□□ -0.31
CNOT4-208ENST00000465721 AMHR2Q16671 573 aa13.13□□□□□ -0.31
CNOT4-208ENST00000465721 INF2Q27J81 1249 aa13.13□□□□□ -0.31
CNOT4-208ENST00000465721 FUT10Q6P4F1 479 aa13.13□□□□□ -0.31
CNOT4-208ENST00000465721 NOTUMQ6P988 496 aa13.13□□□□□ -0.31
CNOT4-208ENST00000465721 LILRA6Q6PI73 481 aa13.13□□□□□ -0.31
CNOT4-208ENST00000465721 ZC3H14Q6PJT7 736 aaKnown RBP13.13□□□□□ -0.31
CNOT4-208ENST00000465721 PALB2Q86YC2 1186 aa13.13□□□□□ -0.31
CNOT4-208ENST00000465721 EXOC8Q8IYI6 725 aa13.13□□□□□ -0.31
CNOT4-208ENST00000465721 GPR65Q8IYL9 337 aa13.13□□□□□ -0.31
CNOT4-208ENST00000465721 TRIM22Q8IYM9 498 aa13.13□□□□□ -0.31
CNOT4-208ENST00000465721 GSTCDQ8NEC7 633 aa13.13□□□□□ -0.31
CNOT4-208ENST00000465721 SPOCK2Q92563 424 aa13.13□□□□□ -0.31
CNOT4-208ENST00000465721 CPB2Q96IY4 423 aa13.13□□□□□ -0.31
CNOT4-208ENST00000465721 AIFM3Q96NN9 605 aa13.13□□□□□ -0.31
CNOT4-208ENST00000465721 GPR62Q9BZJ7 368 aa13.13□□□□□ -0.31
CNOT4-208ENST00000465721 PRKD2Q9BZL6 878 aa13.13□□□□□ -0.31
CNOT4-208ENST00000465721 FOXQ1Q9C009 403 aa13.13□□□□□ -0.31
CNOT4-208ENST00000465721 NXF3Q9H4D5 531 aaKnown RBP13.13□□□□□ -0.31
CNOT4-208ENST00000465721 XPNPEP1Q9NQW7 623 aa13.13□□□□□ -0.31
CNOT4-208ENST00000465721 FNIP2Q9P278 1114 aa13.13□□□□□ -0.31
CNOT4-208ENST00000465721 SIT1Q9Y3P8 196 aa13.13□□□□□ -0.31
CNOT4-208ENST00000465721 NUMBLQ9Y6R0 609 aa13.13□□□□□ -0.31
CNOT4-208ENST00000465721 PDCD11Q14690 1871 aaKnown RBP13.12□□□□□ -0.31
CNOT4-208ENST00000465721 USP24Q9UPU5 2620 aa13.12□□□□□ -0.31
CNOT4-208ENST00000465721 CITO14578 2027 aa13.12□□□□□ -0.31
CNOT4-208ENST00000465721 ZMYM2Q9UBW7 1377 aa13.12□□□□□ -0.31
CNOT4-208ENST00000465721 CNOT1A5YKK6 2376 aaKnown RBP13.12□□□□□ -0.31
CNOT4-208ENST00000465721 DKC1O60832 514 aaKnown RBP eCLIP13.12□□□□□ -0.31
CNOT4-208ENST00000465721 LRRN2O75325 713 aa13.12□□□□□ -0.31
CNOT4-208ENST00000465721 DEXIO95424 95 aa13.12□□□□□ -0.31
CNOT4-208ENST00000465721 P4HBP07237 508 aaKnown RBP13.12□□□□□ -0.31
CNOT4-208ENST00000465721 AXLP30530 894 aa13.12□□□□□ -0.31
CNOT4-208ENST00000465721 YWHABP31946 246 aaKnown RBP13.12□□□□□ -0.31
CNOT4-208ENST00000465721 TOB2Q14106 344 aaPredicted RBP13.12□□□□□ -0.31
CNOT4-208ENST00000465721 PCBP1Q15365 356 aaKnown RBP eCLIP13.12□□□□□ -0.31
CNOT4-208ENST00000465721 DCLRE1AQ6PJP8 1040 aa13.12□□□□□ -0.31
CNOT4-208ENST00000465721 DGLUCYQ7Z3D6 616 aa13.12□□□□□ -0.31
CNOT4-208ENST00000465721 GLYCTKQ8IVS8 523 aa13.12□□□□□ -0.31
CNOT4-208ENST00000465721 C1orf210Q8IVY1 113 aa13.12□□□□□ -0.31
CNOT4-208ENST00000465721 C4orf19Q8IY42 314 aa13.12□□□□□ -0.31
CNOT4-208ENST00000465721 MAML2Q8IZL2 1156 aaPredicted RBP13.12□□□□□ -0.31
CNOT4-208ENST00000465721 FAM177A1Q8N128 213 aaPredicted RBP13.12□□□□□ -0.31
CNOT4-208ENST00000465721 SUMF1Q8NBK3 374 aa13.12□□□□□ -0.31
CNOT4-208ENST00000465721 ST13P5Q8NFI4 369 aaPredicted RBP13.12□□□□□ -0.31
CNOT4-208ENST00000465721 TCP11Q8WWU5 503 aa13.12□□□□□ -0.31
CNOT4-208ENST00000465721 HAS1Q92839 578 aa13.12□□□□□ -0.31
CNOT4-208ENST00000465721 FAM20AQ96MK3 541 aa13.12□□□□□ -0.31
CNOT4-208ENST00000465721 CSRNP2Q9H175 543 aa13.12□□□□□ -0.31
CNOT4-208ENST00000465721 PIDD1Q9HB75 910 aa13.12□□□□□ -0.31
CNOT4-208ENST00000465721 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.12□□□□□ -0.31
CNOT4-208ENST00000465721 GIT1Q9Y2X7 761 aa13.12□□□□□ -0.31
CNOT4-208ENST00000465721 TICRRQ7Z2Z1 1910 aa13.11□□□□□ -0.31
CNOT4-208ENST00000465721 ASAP2O43150 1006 aa13.11□□□□□ -0.31
CNOT4-208ENST00000465721 ZMYND10O75800 440 aa13.11□□□□□ -0.31
CNOT4-208ENST00000465721 RPL17P18621 184 aaKnown RBP13.11□□□□□ -0.31
CNOT4-208ENST00000465721 STARD6P59095 220 aa13.11□□□□□ -0.31
CNOT4-208ENST00000465721 PTENP60484 403 aa13.11□□□□□ -0.31
CNOT4-208ENST00000465721 MBTD1Q05BQ5 628 aa13.11□□□□□ -0.31
CNOT4-208ENST00000465721 SSRP1Q08945 709 aaKnown RBP13.11□□□□□ -0.31
CNOT4-208ENST00000465721 SPIRE1Q08AE8 756 aa13.11□□□□□ -0.31
CNOT4-208ENST00000465721 CAPSQ13938 189 aa13.11□□□□□ -0.31
CNOT4-208ENST00000465721 PUM1Q14671 1186 aaKnown RBP eCLIP13.11□□□□□ -0.314e-8■■■□□ 18.6
CNOT4-208ENST00000465721 USP41Q3LFD5 358 aa13.11□□□□□ -0.31
CNOT4-208ENST00000465721 GALNT17Q6IS24 598 aa13.11□□□□□ -0.31
CNOT4-208ENST00000465721 KRT25Q7Z3Z0 450 aa13.11□□□□□ -0.31
CNOT4-208ENST00000465721 DCLK2Q8N568 766 aa13.11□□□□□ -0.31
CNOT4-208ENST00000465721 RUBCNQ92622 972 aa13.11□□□□□ -0.31
CNOT4-208ENST00000465721 FGF14Q92915 247 aa13.11□□□□□ -0.31
CNOT4-208ENST00000465721 MTRQ99707 1265 aa13.11□□□□□ -0.31
CNOT4-208ENST00000465721 RPP25Q9BUL9 199 aaKnown RBP13.11□□□□□ -0.31
CNOT4-208ENST00000465721 COLEC11Q9BWP8 271 aa13.11□□□□□ -0.31
CNOT4-208ENST00000465721 APOL6Q9BWW8 343 aa13.11□□□□□ -0.31
CNOT4-208ENST00000465721 DLL3Q9NYJ7 618 aa13.11□□□□□ -0.31
CNOT4-208ENST00000465721 RGL1Q9NZL6 768 aa13.11□□□□□ -0.31
CNOT4-208ENST00000465721 FBXW11Q9UKB1 542 aa13.11□□□□□ -0.31
CNOT4-208ENST00000465721 ADAM28Q9UKQ2 775 aa13.11□□□□□ -0.31
CNOT4-208ENST00000465721 CHD6Q8TD26 2715 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms