RNA–Protein interactions for RNA: ENST00000465628.1

SCAP-209, Transcript of SREBF chaperone, humanhuman

TSL 2

Gene SCAP, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-209ENST00000465628 APOL5Q9BWW9 433 aa17.14■□□□□ 0.33
SCAP-209ENST00000465628 CCDC113Q9H0I3 377 aa17.14■□□□□ 0.33
SCAP-209ENST00000465628 ZBP1Q9H171 429 aa17.14■□□□□ 0.33
SCAP-209ENST00000465628 STK39Q9UEW8 545 aa17.14■□□□□ 0.33
SCAP-209ENST00000465628 GDAQ9Y2T3 454 aa17.14■□□□□ 0.33
SCAP-209ENST00000465628 BDP1A6H8Y1 2624 aa17.14■□□□□ 0.33
SCAP-209ENST00000465628 MUC3AQ02505 3323 aa17.13■□□□□ 0.33
SCAP-209ENST00000465628 C2orf71A6NGG8 1288 aa17.13■□□□□ 0.33
SCAP-209ENST00000465628 TTLL13PA6NNM8 815 aa17.13■□□□□ 0.33
SCAP-209ENST00000465628 NRP1O14786 923 aa17.13■□□□□ 0.33
SCAP-209ENST00000465628 RECQL4O94761 1208 aa17.13■□□□□ 0.33
SCAP-209ENST00000465628 URODP06132 367 aa17.13■□□□□ 0.33
SCAP-209ENST00000465628 LONP1P36776 959 aaKnown RBP17.13■□□□□ 0.33
SCAP-209ENST00000465628 TXLNAP40222 546 aa17.13■□□□□ 0.33
SCAP-209ENST00000465628 STRN3Q13033 797 aa17.13■□□□□ 0.33
SCAP-209ENST00000465628 RESTQ13127 1097 aa17.13■□□□□ 0.33
SCAP-209ENST00000465628 ZNF568Q3ZCX4 644 aa17.13■□□□□ 0.33
SCAP-209ENST00000465628 TMEM119Q4V9L6 283 aa17.13■□□□□ 0.33
SCAP-209ENST00000465628 HYIQ5T013 277 aa17.13■□□□□ 0.33
SCAP-209ENST00000465628 GPBP1Q86WP2 473 aa17.13■□□□□ 0.33
SCAP-209ENST00000465628 FAM178BQ8IXR5 827 aa17.13■□□□□ 0.33
SCAP-209ENST00000465628 GJD3Q8N144 294 aa17.13■□□□□ 0.33
SCAP-209ENST00000465628 MRPL43Q8N983 215 aaKnown RBP17.13■□□□□ 0.33
SCAP-209ENST00000465628 CASP10Q92851 521 aa17.13■□□□□ 0.33
SCAP-209ENST00000465628 MRPL4Q9BYD3 311 aaKnown RBP17.13■□□□□ 0.33
SCAP-209ENST00000465628 SNTG2Q9NY99 539 aa17.13■□□□□ 0.33
SCAP-209ENST00000465628 CLEC1BQ9P126 229 aa17.13■□□□□ 0.33
SCAP-209ENST00000465628 CLIC4Q9Y696 253 aa17.13■□□□□ 0.33
SCAP-209ENST00000465628 ZMYM2Q9UBW7 1377 aa17.13■□□□□ 0.33
SCAP-209ENST00000465628 SFI1A8K8P3 1242 aa17.12■□□□□ 0.33
SCAP-209ENST00000465628 C2CD2LO14523 706 aa17.12■□□□□ 0.33
SCAP-209ENST00000465628 SLC16A4O15374 487 aa17.12■□□□□ 0.33
SCAP-209ENST00000465628 SLC26A4O43511 780 aa17.12■□□□□ 0.33
SCAP-209ENST00000465628 STX6O43752 255 aa17.12■□□□□ 0.33
SCAP-209ENST00000465628 CTSAP10619 480 aa17.12■□□□□ 0.33
SCAP-209ENST00000465628 HARSP12081 509 aaKnown RBP17.12■□□□□ 0.33
SCAP-209ENST00000465628 GUCY2CP25092 1073 aa17.12■□□□□ 0.33
SCAP-209ENST00000465628 MARCKSP29966 332 aaPredicted RBP17.12■□□□□ 0.33
SCAP-209ENST00000465628 SMTNP53814 917 aa17.12■□□□□ 0.33
SCAP-209ENST00000465628 CACNB1Q02641 598 aaPredicted RBP17.12■□□□□ 0.33
SCAP-209ENST00000465628 GIT2Q14161 759 aa17.12■□□□□ 0.33
SCAP-209ENST00000465628 KARSQ15046 597 aaKnown RBP17.12■□□□□ 0.33
SCAP-209ENST00000465628 SMAD2Q15796 467 aaKnown RBP17.12■□□□□ 0.33
SCAP-209ENST00000465628 EEF1DP3Q658K8 133 aa17.12■□□□□ 0.33
SCAP-209ENST00000465628 C1orf186Q6ZWK4 172 aa17.12■□□□□ 0.33
SCAP-209ENST00000465628 KCTD17Q8N5Z5 321 aa17.12■□□□□ 0.33
SCAP-209ENST00000465628 SYT2Q8N9I0 419 aaPredicted RBP17.12■□□□□ 0.33
SCAP-209ENST00000465628 SMRP1Q8NCR6 262 aa17.12■□□□□ 0.33
SCAP-209ENST00000465628 VN1R2Q8NFZ6 395 aa17.12■□□□□ 0.33
SCAP-209ENST00000465628 MSLNLQ96KJ4 702 aa17.12■□□□□ 0.33
SCAP-209ENST00000465628 EMILIN2Q9BXX0 1053 aa17.12■□□□□ 0.33
SCAP-209ENST00000465628 ZHX3Q9H4I2 956 aa17.12■□□□□ 0.33
SCAP-209ENST00000465628 KCND2Q9NZV8 630 aa17.12■□□□□ 0.33
SCAP-209ENST00000465628 PRKAG3Q9UGI9 489 aa17.12■□□□□ 0.33
SCAP-209ENST00000465628 INPPL1O15357 1258 aa17.11■□□□□ 0.33
SCAP-209ENST00000465628 TBCAO75347 108 aaKnown RBP17.11■□□□□ 0.33
SCAP-209ENST00000465628 FAM13AO94988 1023 aa17.11■□□□□ 0.33
SCAP-209ENST00000465628 EDN1P05305 212 aa17.11■□□□□ 0.33
SCAP-209ENST00000465628 PLCG1P19174 1290 aa17.11■□□□□ 0.33
SCAP-209ENST00000465628 MATR3P43243 847 aaKnown RBP eCLIP17.11■□□□□ 0.33
SCAP-209ENST00000465628 SLC12A3P55017 1021 aa17.11■□□□□ 0.33
SCAP-209ENST00000465628 GRIN1Q05586 938 aa17.11■□□□□ 0.33
SCAP-209ENST00000465628 ZP2Q05996 745 aa17.11■□□□□ 0.33
SCAP-209ENST00000465628 COASYQ13057 564 aa17.11■□□□□ 0.33
SCAP-209ENST00000465628 KIAA1841Q6NSI8 718 aa17.11■□□□□ 0.33
SCAP-209ENST00000465628 FAM173BQ6P4H8 233 aa17.11■□□□□ 0.33
SCAP-209ENST00000465628 ZBTB33Q86T24 672 aa17.11■□□□□ 0.33
SCAP-209ENST00000465628 ADHFE1Q8IWW8 467 aa17.11■□□□□ 0.33
SCAP-209ENST00000465628 COLGALT2Q8IYK4 626 aa17.11■□□□□ 0.33
SCAP-209ENST00000465628 DAW1Q8N136 415 aa17.11■□□□□ 0.33
SCAP-209ENST00000465628 BICD1Q96G01 975 aa17.11■□□□□ 0.33
SCAP-209ENST00000465628 TCHPQ9BT92 498 aa17.11■□□□□ 0.33
SCAP-209ENST00000465628 COLEC11Q9BWP8 271 aa17.11■□□□□ 0.33
SCAP-209ENST00000465628 C17orf75Q9HAS0 396 aa17.11■□□□□ 0.33
SCAP-209ENST00000465628 MRPL17Q9NRX2 175 aaKnown RBP17.11■□□□□ 0.33
SCAP-209ENST00000465628 MARCH5Q9NX47 278 aa17.11■□□□□ 0.33
SCAP-209ENST00000465628 ANKFY1Q9P2R3 1169 aa17.11■□□□□ 0.33
SCAP-209ENST00000465628 RBM19Q9Y4C8 960 aaKnown RBP17.11■□□□□ 0.33
SCAP-209ENST00000465628 USP15Q9Y4E8 981 aaPredicted RBP17.11■□□□□ 0.33
SCAP-209ENST00000465628 HCFC2Q9Y5Z7 792 aa17.11■□□□□ 0.33
SCAP-209ENST00000465628 MYH15Q9Y2K3 1946 aa17.1■□□□□ 0.33
SCAP-209ENST00000465628 NPHP3-ACAD11A0A0J9YXS1 232 aa17.1■□□□□ 0.33
SCAP-209ENST00000465628 CASTOR2A6NHX0 329 aa17.1■□□□□ 0.33
SCAP-209ENST00000465628 CLASP2O75122 1294 aaKnown RBP17.1■□□□□ 0.33
SCAP-209ENST00000465628 PLS3P13797 630 aa17.1■□□□□ 0.33
SCAP-209ENST00000465628 YARSP54577 528 aaKnown RBP17.1■□□□□ 0.33
SCAP-209ENST00000465628 DSC1Q08554 894 aa17.1■□□□□ 0.33
SCAP-209ENST00000465628 MAPK7Q13164 816 aa17.1■□□□□ 0.33
SCAP-209ENST00000465628 PTPN14Q15678 1187 aa17.1■□□□□ 0.33
SCAP-209ENST00000465628 TPRNQ4KMQ1 711 aa17.1■□□□□ 0.33
SCAP-209ENST00000465628 NT5DC1Q5TFE4 455 aa17.1■□□□□ 0.33
SCAP-209ENST00000465628 FOXD4L5Q5VV16 416 aaPredicted RBP17.1■□□□□ 0.33
SCAP-209ENST00000465628 ANKRD54Q6NXT1 300 aa17.1■□□□□ 0.33
SCAP-209ENST00000465628 FOXD4L4Q8WXT5 416 aaPredicted RBP17.1■□□□□ 0.33
SCAP-209ENST00000465628 SNX21Q969T3 373 aa17.1■□□□□ 0.33
SCAP-209ENST00000465628 HERC2P3Q9BVR0 1158 aa17.1■□□□□ 0.33
SCAP-209ENST00000465628 CCDC94Q9BW85 323 aaPredicted RBP17.1■□□□□ 0.33
SCAP-209ENST00000465628 VN1R3Q9BXE9 311 aa17.1■□□□□ 0.33
SCAP-209ENST00000465628 MIOSQ9NXC5 875 aa17.1■□□□□ 0.33
SCAP-209ENST00000465628 ARHGAP28Q9P2N2 729 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms