RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 ZNF585AQ6P3V2 769 aa7.92□□□□□ -1.14
PTCD3-205ENST00000464541 DOK3Q7L591 496 aa7.92□□□□□ -1.14
PTCD3-205ENST00000464541 ZBTB46Q86UZ6 589 aa7.92□□□□□ -1.14
PTCD3-205ENST00000464541 SGMS1Q86VZ5 419 aa7.92□□□□□ -1.14
PTCD3-205ENST00000464541 CYFIP2Q96F07 1278 aa7.92□□□□□ -1.14
PTCD3-205ENST00000464541 TEKT5Q96M29 485 aa7.92□□□□□ -1.14
PTCD3-205ENST00000464541 SLC2A13Q96QE2 648 aa7.92□□□□□ -1.14
PTCD3-205ENST00000464541 KRTAP4-8A0A0G2JLE6 195 aa7.91□□□□□ -1.14
PTCD3-205ENST00000464541 CAPN14A8MX76 684 aa7.91□□□□□ -1.14
PTCD3-205ENST00000464541 C1QTNF3-AMACRE9PGA6 284 aa7.91□□□□□ -1.14
PTCD3-205ENST00000464541 SNUPNO95149 360 aaKnown RBP7.91□□□□□ -1.14
PTCD3-205ENST00000464541 C5AR1P21730 350 aa7.91□□□□□ -1.14
PTCD3-205ENST00000464541 ADSLP30566 484 aaPredicted RBP7.91□□□□□ -1.14
PTCD3-205ENST00000464541 APBA1Q02410 837 aa7.91□□□□□ -1.14
PTCD3-205ENST00000464541 DCAF17Q5H9S7 520 aaPredicted RBP7.91□□□□□ -1.14
PTCD3-205ENST00000464541 Q6ZVL8 140 aa7.91□□□□□ -1.14
PTCD3-205ENST00000464541 THEMISQ8N1K5 641 aaPredicted RBP7.91□□□□□ -1.14
PTCD3-205ENST00000464541 ZNF808Q8N4W9 903 aaPredicted RBP7.91□□□□□ -1.14
PTCD3-205ENST00000464541 MDGA1Q8NFP4 955 aa7.91□□□□□ -1.14
PTCD3-205ENST00000464541 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.91□□□□□ -1.14
PTCD3-205ENST00000464541 DMRT3Q9NQL9 472 aa7.91□□□□□ -1.14
PTCD3-205ENST00000464541 DNM3Q9UQ16 869 aa7.91□□□□□ -1.14
PTCD3-205ENST00000464541 CLCA2Q9UQC9 943 aa7.91□□□□□ -1.14
PTCD3-205ENST00000464541 B5MCH6 92 aa7.9□□□□□ -1.14
PTCD3-205ENST00000464541 ALDH1L1O75891 902 aa7.9□□□□□ -1.14
PTCD3-205ENST00000464541 FLT3LGP49771 235 aa7.9□□□□□ -1.14
PTCD3-205ENST00000464541 ADKP55263 362 aaKnown RBP7.9□□□□□ -1.14
PTCD3-205ENST00000464541 NOMO1Q15155 1222 aa7.9□□□□□ -1.14
PTCD3-205ENST00000464541 FAM83AQ86UY5 434 aa7.9□□□□□ -1.14
PTCD3-205ENST00000464541 ST8SIA2Q92186 375 aa7.9□□□□□ -1.14
PTCD3-205ENST00000464541 EPC1Q9H2F5 836 aa7.9□□□□□ -1.14
PTCD3-205ENST00000464541 MANSC1Q9H8J5 431 aa7.9□□□□□ -1.14
PTCD3-205ENST00000464541 TCF7L1Q9HCS4 588 aa7.9□□□□□ -1.14
PTCD3-205ENST00000464541 TUBD1Q9UJT1 453 aa7.9□□□□□ -1.14
PTCD3-205ENST00000464541 GIT1Q9Y2X7 761 aa7.9□□□□□ -1.14
PTCD3-205ENST00000464541 E2F8A0AVK6 867 aa7.89□□□□□ -1.15
PTCD3-205ENST00000464541 KRTAP23-1A1A580 65 aa7.89□□□□□ -1.15
PTCD3-205ENST00000464541 ACRV1P26436 265 aa7.89□□□□□ -1.15
PTCD3-205ENST00000464541 HIBADHP31937 336 aaKnown RBP7.89□□□□□ -1.15
PTCD3-205ENST00000464541 SREBF1P36956 1147 aa7.89□□□□□ -1.15
PTCD3-205ENST00000464541 PER3P56645 1201 aa7.89□□□□□ -1.15
PTCD3-205ENST00000464541 SP140Q13342 867 aa7.89□□□□□ -1.15
PTCD3-205ENST00000464541 SPTY2D1Q68D10 685 aaPredicted RBP7.89□□□□□ -1.15
PTCD3-205ENST00000464541 HTR3DQ70Z44 454 aa7.89□□□□□ -1.15
PTCD3-205ENST00000464541 ZNF572Q7Z3I7 529 aaPredicted RBP7.89□□□□□ -1.15
PTCD3-205ENST00000464541 GSPT2Q8IYD1 628 aaKnown RBP7.89□□□□□ -1.15
PTCD3-205ENST00000464541 TRMT2AQ8IZ69 625 aaKnown RBP7.89□□□□□ -1.15
PTCD3-205ENST00000464541 CASKIN2Q8WXE0 1202 aa7.89□□□□□ -1.15
PTCD3-205ENST00000464541 C7orf25Q9BPX7 421 aa7.89□□□□□ -1.15
PTCD3-205ENST00000464541 LANCL2Q9NS86 450 aa7.89□□□□□ -1.15
PTCD3-205ENST00000464541 STC2O76061 302 aa7.88□□□□□ -1.15
PTCD3-205ENST00000464541 HSP90B1P14625 803 aaKnown RBP7.88□□□□□ -1.15
PTCD3-205ENST00000464541 IL2RBP14784 551 aa7.88□□□□□ -1.15
PTCD3-205ENST00000464541 VCAM1P19320 739 aa7.88□□□□□ -1.15
PTCD3-205ENST00000464541 CDSNQ15517 529 aa7.88□□□□□ -1.15
PTCD3-205ENST00000464541 FAM47AQ5JRC9 791 aa7.88□□□□□ -1.15
PTCD3-205ENST00000464541 PRAMEF14Q5SWL7 426 aa7.88□□□□□ -1.15
PTCD3-205ENST00000464541 NAIF1Q69YI7 327 aaPredicted RBP7.88□□□□□ -1.15
PTCD3-205ENST00000464541 MIGA2Q7L4E1 593 aa7.88□□□□□ -1.15
PTCD3-205ENST00000464541 PPM1NQ8N819 430 aa7.88□□□□□ -1.15
PTCD3-205ENST00000464541 NRG4Q8WWG1 115 aa7.88□□□□□ -1.15
PTCD3-205ENST00000464541 HDAC10Q969S8 669 aa7.88□□□□□ -1.15
PTCD3-205ENST00000464541 UHRF1Q96T88 793 aaPredicted RBP7.88□□□□□ -1.15
PTCD3-205ENST00000464541 HDAC5Q9UQL6 1122 aa7.88□□□□□ -1.15
PTCD3-205ENST00000464541 GOLGA6L6A8MZA4 724 aa7.87□□□□□ -1.15
PTCD3-205ENST00000464541 PJA2O43164 708 aa7.87□□□□□ -1.15
PTCD3-205ENST00000464541 GUCY1A2P33402 732 aa7.87□□□□□ -1.15
PTCD3-205ENST00000464541 EPHB1P54762 984 aa7.87□□□□□ -1.15
PTCD3-205ENST00000464541 PTH1RQ03431 593 aa7.87□□□□□ -1.15
PTCD3-205ENST00000464541 SEPT2Q15019 361 aa7.87□□□□□ -1.15
PTCD3-205ENST00000464541 TTF1Q15361 905 aaPredicted RBP7.87□□□□□ -1.15
PTCD3-205ENST00000464541 FAM214AQ32MH5 1076 aa7.87□□□□□ -1.15
PTCD3-205ENST00000464541 CMTR2Q8IYT2 770 aaKnown RBP7.87□□□□□ -1.15
PTCD3-205ENST00000464541 PQLC1Q8N2U9 271 aa7.87□□□□□ -1.15
PTCD3-205ENST00000464541 MDM1Q8TC05 714 aa7.87□□□□□ -1.15
PTCD3-205ENST00000464541 CPPED1Q9BRF8 314 aaPredicted RBP7.87□□□□□ -1.15
PTCD3-205ENST00000464541 CSRNP2Q9H175 543 aa7.87□□□□□ -1.15
PTCD3-205ENST00000464541 TMEM140Q9NV12 185 aa7.87□□□□□ -1.15
PTCD3-205ENST00000464541 MOCS1Q9NZB8 636 aa7.87□□□□□ -1.15
PTCD3-205ENST00000464541 TEX33O43247 280 aa7.86□□□□□ -1.15
PTCD3-205ENST00000464541 PTPN7P35236 360 aa7.86□□□□□ -1.15
PTCD3-205ENST00000464541 MAN2A2P49641 1150 aa7.86□□□□□ -1.15
PTCD3-205ENST00000464541 KIF23Q02241 960 aaPredicted RBP7.86□□□□□ -1.15
PTCD3-205ENST00000464541 ODF1Q14990 250 aa7.86□□□□□ -1.15
PTCD3-205ENST00000464541 GPRIN1Q7Z2K8 1008 aa7.86□□□□□ -1.15
PTCD3-205ENST00000464541 ELOA2Q8IYF1 753 aaPredicted RBP7.86□□□□□ -1.15
PTCD3-205ENST00000464541 CPA6Q8N4T0 437 aa7.86□□□□□ -1.15
PTCD3-205ENST00000464541 OR52N2Q8NGI0 321 aa7.86□□□□□ -1.15
PTCD3-205ENST00000464541 COA7Q96BR5 231 aa7.86□□□□□ -1.15
PTCD3-205ENST00000464541 CAMKK2Q96RR4 588 aa7.86□□□□□ -1.15
PTCD3-205ENST00000464541 NUP88Q99567 741 aaPredicted RBP7.86□□□□□ -1.15
PTCD3-205ENST00000464541 GPR20Q99678 358 aa7.86□□□□□ -1.15
PTCD3-205ENST00000464541 INTUQ9ULD6 942 aa7.86□□□□□ -1.15
PTCD3-205ENST00000464541 ZMYM3Q14202 1370 aa7.85□□□□□ -1.15
PTCD3-205ENST00000464541 PRR5-ARHGAP8B1AHC4 643 aa7.85□□□□□ -1.15
PTCD3-205ENST00000464541 ADCY6O43306 1168 aa7.85□□□□□ -1.15
PTCD3-205ENST00000464541 SGTAO43765 313 aa7.85□□□□□ -1.15
PTCD3-205ENST00000464541 ALOX15P16050 662 aaPredicted RBP7.85□□□□□ -1.15
PTCD3-205ENST00000464541 SLC6A9P48067 706 aa7.85□□□□□ -1.15
PTCD3-205ENST00000464541 RABGGTBP53611 331 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms