RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 ZNF131P52739 623 aa18.71■□□□□ 0.59
VPS52-215ENST00000464425 STRN3Q13033 797 aa18.71■□□□□ 0.59
VPS52-215ENST00000464425 HAUS6Q7Z4H7 955 aa18.71■□□□□ 0.59
VPS52-215ENST00000464425 RSPH1Q8WYR4 309 aa18.71■□□□□ 0.59
VPS52-215ENST00000464425 DDX12PQ92771 950 aa18.71■□□□□ 0.59
VPS52-215ENST00000464425 ACO2Q99798 780 aaKnown RBP18.71■□□□□ 0.59
VPS52-215ENST00000464425 LMAN2LQ9H0V9 348 aa18.71■□□□□ 0.59
VPS52-215ENST00000464425 MIOSQ9NXC5 875 aa18.71■□□□□ 0.59
VPS52-215ENST00000464425 SNTG2Q9NY99 539 aa18.71■□□□□ 0.59
VPS52-215ENST00000464425 SPG21Q9NZD8 308 aa18.71■□□□□ 0.59
VPS52-215ENST00000464425 KANSL3Q9P2N6 904 aa18.71■□□□□ 0.59
VPS52-215ENST00000464425 GIT1Q9Y2X7 761 aa18.71■□□□□ 0.59
VPS52-215ENST00000464425 KIAA1671Q9BY89 1806 aa18.71■□□□□ 0.59
VPS52-215ENST00000464425 FAM237AA0A1B0GTK4 181 aa18.7■□□□□ 0.58
VPS52-215ENST00000464425 TRAK2O60296 914 aa18.7■□□□□ 0.58
VPS52-215ENST00000464425 B4GALT3O60512 393 aa18.7■□□□□ 0.58
VPS52-215ENST00000464425 DDHD2O94830 711 aa18.7■□□□□ 0.58
VPS52-215ENST00000464425 SCNN1GP51170 649 aa18.7■□□□□ 0.58
VPS52-215ENST00000464425 ZBTB33Q86T24 672 aa18.7■□□□□ 0.58
VPS52-215ENST00000464425 STAMQ92783 540 aa18.7■□□□□ 0.58
VPS52-215ENST00000464425 DHX58Q96C10 678 aa18.7■□□□□ 0.58
VPS52-215ENST00000464425 FAM193BQ96PV7 902 aaPredicted RBP18.7■□□□□ 0.58
VPS52-215ENST00000464425 PYM1Q9BRP8 204 aaKnown RBP18.7■□□□□ 0.58
VPS52-215ENST00000464425 TCHPQ9BT92 498 aa18.7■□□□□ 0.58
VPS52-215ENST00000464425 DNAJB4Q9UDY4 337 aa18.7■□□□□ 0.58
VPS52-215ENST00000464425 TNFSF13BQ9Y275 285 aa18.7■□□□□ 0.58
VPS52-215ENST00000464425 GDAQ9Y2T3 454 aa18.7■□□□□ 0.58
VPS52-215ENST00000464425 GOLGA6L4A6NEF3 574 aa18.69■□□□□ 0.58
VPS52-215ENST00000464425 H0YCG3 227 aa18.69■□□□□ 0.58
VPS52-215ENST00000464425 K7ENM7 598 aa18.69■□□□□ 0.58
VPS52-215ENST00000464425 GALTP07902 379 aa18.69■□□□□ 0.58
VPS52-215ENST00000464425 NMT1P30419 496 aaKnown RBP18.69■□□□□ 0.58
VPS52-215ENST00000464425 IRS1P35568 1242 aa18.69■□□□□ 0.58
VPS52-215ENST00000464425 NCKAP1LP55160 1127 aa18.69■□□□□ 0.58
VPS52-215ENST00000464425 DCAF4L1Q3SXM0 396 aa18.69■□□□□ 0.58
VPS52-215ENST00000464425 TIGD5Q53EQ6 642 aa18.69■□□□□ 0.58
VPS52-215ENST00000464425 TCEAL5Q5H9L2 206 aa18.69■□□□□ 0.58
VPS52-215ENST00000464425 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.69■□□□□ 0.58
VPS52-215ENST00000464425 FAM178BQ8IXR5 827 aa18.69■□□□□ 0.58
VPS52-215ENST00000464425 SLC39A11Q8N1S5 342 aa18.69■□□□□ 0.58
VPS52-215ENST00000464425 MICAL1Q8TDZ2 1067 aa18.69■□□□□ 0.58
VPS52-215ENST00000464425 ZBTB45Q96K62 511 aaPredicted RBP18.69■□□□□ 0.58
VPS52-215ENST00000464425 GBP4Q96PP9 640 aa18.69■□□□□ 0.58
VPS52-215ENST00000464425 NSUN3Q9H649 340 aaKnown RBP18.69■□□□□ 0.58
VPS52-215ENST00000464425 PTPRHQ9HD43 1115 aa18.69■□□□□ 0.58
VPS52-215ENST00000464425 KCNH3Q9ULD8 1083 aa18.69■□□□□ 0.58
VPS52-215ENST00000464425 HPSEQ9Y251 543 aa18.69■□□□□ 0.58
VPS52-215ENST00000464425 PCDHGC5Q9Y5F6 944 aa18.69■□□□□ 0.58
VPS52-215ENST00000464425 MYH11P35749 1972 aa18.69■□□□□ 0.58
VPS52-215ENST00000464425 REV3LO60673 3130 aa18.68■□□□□ 0.58
VPS52-215ENST00000464425 POLR2DO15514 142 aaKnown RBP18.68■□□□□ 0.58
VPS52-215ENST00000464425 RECQL4O94761 1208 aa18.68■□□□□ 0.58
VPS52-215ENST00000464425 PPM1AP35813 382 aa18.68■□□□□ 0.58
VPS52-215ENST00000464425 SLC11A1P49279 550 aa18.68■□□□□ 0.58
VPS52-215ENST00000464425 PLCB3Q01970 1234 aa18.68■□□□□ 0.58
VPS52-215ENST00000464425 KRT17Q04695 432 aa18.68■□□□□ 0.58
VPS52-215ENST00000464425 E2F4Q16254 413 aa18.68■□□□□ 0.58
VPS52-215ENST00000464425 ZNF568Q3ZCX4 644 aa18.68■□□□□ 0.58
VPS52-215ENST00000464425 TPRNQ4KMQ1 711 aa18.68■□□□□ 0.58
VPS52-215ENST00000464425 APBB1IPQ7Z5R6 666 aaPredicted RBP18.68■□□□□ 0.58
VPS52-215ENST00000464425 TMEM173Q86WV6 379 aaPredicted RBP18.68■□□□□ 0.58
VPS52-215ENST00000464425 SFR1Q86XK3 245 aa18.68■□□□□ 0.58
VPS52-215ENST00000464425 IQUBQ8NA54 791 aa18.68■□□□□ 0.58
VPS52-215ENST00000464425 GSTCDQ8NEC7 633 aa18.68■□□□□ 0.58
VPS52-215ENST00000464425 MRPS27Q92552 414 aaKnown RBP18.68■□□□□ 0.58
VPS52-215ENST00000464425 DNAJC19Q96DA6 116 aa18.68■□□□□ 0.58
VPS52-215ENST00000464425 CDT1Q9H211 546 aa18.68■□□□□ 0.58
VPS52-215ENST00000464425 CXCL16Q9H2A7 254 aa18.68■□□□□ 0.58
VPS52-215ENST00000464425 CUEDC2Q9H467 287 aa18.68■□□□□ 0.58
VPS52-215ENST00000464425 PUF60Q9UHX1 559 aaKnown RBP18.68■□□□□ 0.58
VPS52-215ENST00000464425 INPPL1O15357 1258 aa18.67■□□□□ 0.58
VPS52-215ENST00000464425 ALDH2P05091 517 aa18.67■□□□□ 0.58
VPS52-215ENST00000464425 HARSP12081 509 aaKnown RBP18.67■□□□□ 0.58
VPS52-215ENST00000464425 IDEP14735 1019 aa18.67■□□□□ 0.58
VPS52-215ENST00000464425 ERVFC1P60507 584 aa18.67■□□□□ 0.58
VPS52-215ENST00000464425 OSTNP61366 133 aa18.67■□□□□ 0.58
VPS52-215ENST00000464425 UBE3AQ05086 875 aa18.67■□□□□ 0.58
VPS52-215ENST00000464425 CEP120Q8N960 986 aa18.67■□□□□ 0.58
VPS52-215ENST00000464425 BICD1Q96G01 975 aa18.67■□□□□ 0.58
VPS52-215ENST00000464425 RPS6KC1Q96S38 1066 aa18.67■□□□□ 0.58
VPS52-215ENST00000464425 FIZ1Q96SL8 496 aa18.67■□□□□ 0.58
VPS52-215ENST00000464425 TLR9Q9NR96 1032 aa18.67■□□□□ 0.58
VPS52-215ENST00000464425 TBC1D7Q9P0N9 293 aa18.67■□□□□ 0.58
VPS52-215ENST00000464425 ANKFY1Q9P2R3 1169 aa18.67■□□□□ 0.58
VPS52-215ENST00000464425 TBX20Q9UMR3 447 aa18.67■□□□□ 0.58
VPS52-215ENST00000464425 A0A1B0GVL5 298 aa18.66■□□□□ 0.58
VPS52-215ENST00000464425 PFKFB1P16118 471 aa18.66■□□□□ 0.58
VPS52-215ENST00000464425 PROZP22891 400 aa18.66■□□□□ 0.58
VPS52-215ENST00000464425 MATR3P43243 847 aaKnown RBP eCLIP18.66■□□□□ 0.58
VPS52-215ENST00000464425 ZC2HC1CQ53FD0 456 aaPredicted RBP18.66■□□□□ 0.58
VPS52-215ENST00000464425 MPZL3Q6UWV2 235 aa18.66■□□□□ 0.58
VPS52-215ENST00000464425 COLGALT2Q8IYK4 626 aa18.66■□□□□ 0.58
VPS52-215ENST00000464425 BCL7CQ8WUZ0 217 aaPredicted RBP18.66■□□□□ 0.58
VPS52-215ENST00000464425 TMEM169Q96HH4 297 aa18.66■□□□□ 0.58
VPS52-215ENST00000464425 IGSF21Q96ID5 467 aa18.66■□□□□ 0.58
VPS52-215ENST00000464425 TMEM175Q9BSA9 504 aa18.66■□□□□ 0.58
VPS52-215ENST00000464425 IGFLR1Q9H665 355 aa18.66■□□□□ 0.58
VPS52-215ENST00000464425 USP25Q9UHP3 1055 aa18.66■□□□□ 0.58
VPS52-215ENST00000464425 LZTS1Q9Y250 596 aa18.66■□□□□ 0.58
VPS52-215ENST00000464425 FAN1Q9Y2M0 1017 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms