RNA–Protein interactions for RNA: ENST00000463988.1

SNRNP40-203, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-203ENST00000463988 RPS6KC1Q96S38 1066 aa15.9■□□□□ 0.14
SNRNP40-203ENST00000463988 COLEC11Q9BWP8 271 aa15.9■□□□□ 0.14
SNRNP40-203ENST00000463988 NXF3Q9H4D5 531 aaKnown RBP15.9■□□□□ 0.14
SNRNP40-203ENST00000463988 SFXN1Q9H9B4 322 aa15.9■□□□□ 0.14
SNRNP40-203ENST00000463988 MIOSQ9NXC5 875 aa15.9■□□□□ 0.14
SNRNP40-203ENST00000463988 PRG3Q9Y2Y8 225 aaPredicted RBP15.9■□□□□ 0.14
SNRNP40-203ENST00000463988 STK24Q9Y6E0 443 aa15.9■□□□□ 0.14
SNRNP40-203ENST00000463988 ARHGEF35A5YM69 484 aa15.89■□□□□ 0.13
SNRNP40-203ENST00000463988 NPTXRO95502 500 aa15.89■□□□□ 0.13
SNRNP40-203ENST00000463988 GRIK3Q13003 919 aa15.89■□□□□ 0.13
SNRNP40-203ENST00000463988 PPP2R5AQ15172 486 aa15.89■□□□□ 0.13
SNRNP40-203ENST00000463988 C8orf34Q49A92 452 aa15.89■□□□□ 0.13
SNRNP40-203ENST00000463988 KIAA0319Q5VV43 1072 aa15.89■□□□□ 0.13
SNRNP40-203ENST00000463988 MAEAQ7L5Y9 396 aa15.89■□□□□ 0.13
SNRNP40-203ENST00000463988 GPR149Q86SP6 731 aa15.89■□□□□ 0.13
SNRNP40-203ENST00000463988 ZDHHC14Q8IZN3 488 aa15.89■□□□□ 0.13
SNRNP40-203ENST00000463988 APOL6Q9BWW8 343 aa15.89■□□□□ 0.13
SNRNP40-203ENST00000463988 RXFP1Q9HBX9 757 aa15.89■□□□□ 0.13
SNRNP40-203ENST00000463988 TSHZ2Q9NRE2 1034 aa15.89■□□□□ 0.13
SNRNP40-203ENST00000463988 DPP7Q9UHL4 492 aa15.89■□□□□ 0.13
SNRNP40-203ENST00000463988 CDH22Q9UJ99 828 aa15.89■□□□□ 0.13
SNRNP40-203ENST00000463988 C2CD4DB7Z1M9 353 aa15.88■□□□□ 0.13
SNRNP40-203ENST00000463988 N4BP3O15049 544 aa15.88■□□□□ 0.13
SNRNP40-203ENST00000463988 SSBP05455 408 aaKnown RBP eCLIP15.88■□□□□ 0.13
SNRNP40-203ENST00000463988 ADH1AP07327 375 aa15.88■□□□□ 0.13
SNRNP40-203ENST00000463988 AKAP5P24588 427 aa15.88■□□□□ 0.13
SNRNP40-203ENST00000463988 NAMPTP43490 491 aa15.88■□□□□ 0.13
SNRNP40-203ENST00000463988 GLUD2P49448 558 aa15.88■□□□□ 0.13
SNRNP40-203ENST00000463988 DSG1Q02413 1049 aa15.88■□□□□ 0.13
SNRNP40-203ENST00000463988 MAPK6Q16659 721 aa15.88■□□□□ 0.13
SNRNP40-203ENST00000463988 ELMSAN1Q6PJG2 1045 aa15.88■□□□□ 0.13
SNRNP40-203ENST00000463988 C15orf39Q6ZRI6 1047 aa15.88■□□□□ 0.13
SNRNP40-203ENST00000463988 TAS1R1Q7RTX1 841 aa15.88■□□□□ 0.13
SNRNP40-203ENST00000463988 UBALD2Q8IYN6 164 aa15.88■□□□□ 0.13
SNRNP40-203ENST00000463988 PLCD3Q8N3E9 789 aa15.88■□□□□ 0.13
SNRNP40-203ENST00000463988 FBXL6Q8N531 539 aa15.88■□□□□ 0.13
SNRNP40-203ENST00000463988 CMASQ8NFW8 434 aaPredicted RBP15.88■□□□□ 0.13
SNRNP40-203ENST00000463988 ASIC4Q96FT7 647 aa15.88■□□□□ 0.13
SNRNP40-203ENST00000463988 PRRX2Q99811 253 aa15.88■□□□□ 0.13
SNRNP40-203ENST00000463988 RHOBTB2Q9BYZ6 727 aa15.88■□□□□ 0.13
SNRNP40-203ENST00000463988 CHST7Q9NS84 486 aa15.88■□□□□ 0.13
SNRNP40-203ENST00000463988 LRWD1Q9UFC0 647 aa15.88■□□□□ 0.13
SNRNP40-203ENST00000463988 SORCS3Q9UPU3 1222 aa15.88■□□□□ 0.13
SNRNP40-203ENST00000463988 CACNA1HO95180 2353 aa15.87■□□□□ 0.13
SNRNP40-203ENST00000463988 LAD1O00515 517 aa15.87■□□□□ 0.13
SNRNP40-203ENST00000463988 ACKR2O00590 384 aa15.87■□□□□ 0.13
SNRNP40-203ENST00000463988 TEX28O15482 410 aa15.87■□□□□ 0.13
SNRNP40-203ENST00000463988 WEE2P0C1S8 567 aa15.87■□□□□ 0.13
SNRNP40-203ENST00000463988 SP100P23497 879 aaPredicted RBP15.87■□□□□ 0.13
SNRNP40-203ENST00000463988 CCT6AP40227 531 aaKnown RBP15.87■□□□□ 0.13
SNRNP40-203ENST00000463988 EFNA5P52803 228 aa15.87■□□□□ 0.13
SNRNP40-203ENST00000463988 PRPF4BQ13523 1007 aaKnown RBP15.87■□□□□ 0.13
SNRNP40-203ENST00000463988 MTMR3Q13615 1198 aa15.87■□□□□ 0.13
SNRNP40-203ENST00000463988 KANK3Q6NY19 840 aa15.87■□□□□ 0.13
SNRNP40-203ENST00000463988 TMC5Q6UXY8 1006 aa15.87■□□□□ 0.13
SNRNP40-203ENST00000463988 CYP26C1Q6V0L0 522 aa15.87■□□□□ 0.13
SNRNP40-203ENST00000463988 ZBTB33Q86T24 672 aa15.87■□□□□ 0.13
SNRNP40-203ENST00000463988 CDR2LQ86X02 465 aaPredicted RBP15.87■□□□□ 0.13
SNRNP40-203ENST00000463988 SUGP1Q8IWZ8 645 aaKnown RBP15.87■□□□□ 0.13
SNRNP40-203ENST00000463988 IGSF22Q8N9C0 903 aa15.87■□□□□ 0.13
SNRNP40-203ENST00000463988 TDRD5Q8NAT2 981 aaKnown RBP15.87■□□□□ 0.13
SNRNP40-203ENST00000463988 KREMEN2Q8NCW0 462 aa15.87■□□□□ 0.13
SNRNP40-203ENST00000463988 BSNDQ8WZ55 320 aa15.87■□□□□ 0.13
SNRNP40-203ENST00000463988 KIFAP3Q92845 792 aa15.87■□□□□ 0.13
SNRNP40-203ENST00000463988 RAB34Q9BZG1 259 aa15.87■□□□□ 0.13
SNRNP40-203ENST00000463988 CCDC113Q9H0I3 377 aa15.87■□□□□ 0.13
SNRNP40-203ENST00000463988 PDZD7Q9H5P4 517 aa15.87■□□□□ 0.13
SNRNP40-203ENST00000463988 PARP2Q9UGN5 583 aa15.87■□□□□ 0.13
SNRNP40-203ENST00000463988 KIF3AQ9Y496 699 aa15.87■□□□□ 0.13
SNRNP40-203ENST00000463988 TDRD15B5MCY1 1934 aaKnown RBP15.87■□□□□ 0.13
SNRNP40-203ENST00000463988 MYO10Q9HD67 2058 aa15.87■□□□□ 0.13
SNRNP40-203ENST00000463988 PRKCBP05771 671 aa15.86■□□□□ 0.13
SNRNP40-203ENST00000463988 TOB1P50616 345 aaPredicted RBP15.86■□□□□ 0.13
SNRNP40-203ENST00000463988 PTGDRQ13258 359 aa15.86■□□□□ 0.13
SNRNP40-203ENST00000463988 RABEP1Q15276 862 aa15.86■□□□□ 0.13
SNRNP40-203ENST00000463988 ECM1Q16610 540 aa15.86■□□□□ 0.13
SNRNP40-203ENST00000463988 USP41Q3LFD5 358 aa15.86■□□□□ 0.13
SNRNP40-203ENST00000463988 DEPTORQ8TB45 409 aa15.86■□□□□ 0.13
SNRNP40-203ENST00000463988 HDAC7Q8WUI4 952 aa15.86■□□□□ 0.13
SNRNP40-203ENST00000463988 IFT74Q96LB3 600 aa15.86■□□□□ 0.13
SNRNP40-203ENST00000463988 ADPGKQ9BRR6 497 aa15.86■□□□□ 0.13
SNRNP40-203ENST00000463988 BHMT2Q9H2M3 363 aa15.86■□□□□ 0.13
SNRNP40-203ENST00000463988 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.86■□□□□ 0.13
SNRNP40-203ENST00000463988 FNIP2Q9P278 1114 aa15.86■□□□□ 0.13
SNRNP40-203ENST00000463988 ADAM28Q9UKQ2 775 aa15.86■□□□□ 0.13
SNRNP40-203ENST00000463988 SPDYE4A6NLX3 237 aa15.85■□□□□ 0.13
SNRNP40-203ENST00000463988 TTLL13PA6NNM8 815 aa15.85■□□□□ 0.13
SNRNP40-203ENST00000463988 F8W810 466 aa15.85■□□□□ 0.13
SNRNP40-203ENST00000463988 C2CD2LO14523 706 aa15.85■□□□□ 0.13
SNRNP40-203ENST00000463988 PAPLNO95428 1278 aa15.85■□□□□ 0.13
SNRNP40-203ENST00000463988 GLUD1P00367 558 aa15.85■□□□□ 0.13
SNRNP40-203ENST00000463988 PRPHP41219 470 aa15.85■□□□□ 0.13
SNRNP40-203ENST00000463988 NHLH1Q02575 133 aa15.85■□□□□ 0.13
SNRNP40-203ENST00000463988 CREMQ03060 361 aa15.85■□□□□ 0.13
SNRNP40-203ENST00000463988 TUSC3Q13454 348 aa15.85■□□□□ 0.13
SNRNP40-203ENST00000463988 FUT10Q6P4F1 479 aa15.85■□□□□ 0.13
SNRNP40-203ENST00000463988 CCDC149Q6ZUS6 474 aa15.85■□□□□ 0.13
SNRNP40-203ENST00000463988 OTOP3Q7RTS5 596 aa15.85■□□□□ 0.13
SNRNP40-203ENST00000463988 ACSF2Q96CM8 615 aaPredicted RBP15.85■□□□□ 0.13
SNRNP40-203ENST00000463988 GPR62Q9BZJ7 368 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms