RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 SFR1Q86XK3 245 aa19.43■□□□□ 0.7
VPS52-214ENST00000463486 MRPL38Q96DV4 380 aaKnown RBP19.43■□□□□ 0.7
VPS52-214ENST00000463486 ZBTB45Q96K62 511 aaPredicted RBP19.43■□□□□ 0.7
VPS52-214ENST00000463486 TRIM9Q9C026 710 aa19.43■□□□□ 0.7
VPS52-214ENST00000463486 TRIM6Q9C030 488 aaPredicted RBP19.43■□□□□ 0.7
VPS52-214ENST00000463486 HAPLN2Q9GZV7 340 aa19.43■□□□□ 0.7
VPS52-214ENST00000463486 CDT1Q9H211 546 aa19.43■□□□□ 0.7
VPS52-214ENST00000463486 FAM13BQ9NYF5 915 aa19.43■□□□□ 0.7
VPS52-214ENST00000463486 CIZ1Q9ULV3 898 aaPredicted RBP19.43■□□□□ 0.7
VPS52-214ENST00000463486 TBX20Q9UMR3 447 aa19.43■□□□□ 0.7
VPS52-214ENST00000463486 INPP5FQ9Y2H2 1132 aa19.43■□□□□ 0.7
VPS52-214ENST00000463486 ZMYM2Q9UBW7 1377 aa19.43■□□□□ 0.7
VPS52-214ENST00000463486 A0A1B0GVL5 298 aa19.42■□□□□ 0.7
VPS52-214ENST00000463486 A0A1W2PQ27 194 aa19.42■□□□□ 0.7
VPS52-214ENST00000463486 A0A1W2PQ64 194 aa19.42■□□□□ 0.7
VPS52-214ENST00000463486 A0A1W2PQD8 194 aa19.42■□□□□ 0.7
VPS52-214ENST00000463486 MEFVO15553 781 aaPredicted RBP19.42■□□□□ 0.7
VPS52-214ENST00000463486 ACTN4O43707 911 aaKnown RBP19.42■□□□□ 0.7
VPS52-214ENST00000463486 PIGRP01833 764 aa19.42■□□□□ 0.7
VPS52-214ENST00000463486 PFKFB1P16118 471 aa19.42■□□□□ 0.7
VPS52-214ENST00000463486 LAG3P18627 525 aa19.42■□□□□ 0.7
VPS52-214ENST00000463486 SCP2P22307 547 aa19.42■□□□□ 0.7
VPS52-214ENST00000463486 MLH1P40692 756 aa19.42■□□□□ 0.7
VPS52-214ENST00000463486 BCAR1P56945 870 aa19.42■□□□□ 0.7
VPS52-214ENST00000463486 ZC2HC1CQ53FD0 456 aaPredicted RBP19.42■□□□□ 0.7
VPS52-214ENST00000463486 FAM178BQ8IXR5 827 aa19.42■□□□□ 0.7
VPS52-214ENST00000463486 CEP120Q8N960 986 aa19.42■□□□□ 0.7
VPS52-214ENST00000463486 C7orf25Q9BPX7 421 aa19.42■□□□□ 0.7
VPS52-214ENST00000463486 APOL6Q9BWW8 343 aa19.42■□□□□ 0.7
VPS52-214ENST00000463486 FGFBP2Q9BYJ0 223 aa19.42■□□□□ 0.7
VPS52-214ENST00000463486 ZHX3Q9H4I2 956 aa19.42■□□□□ 0.7
VPS52-214ENST00000463486 SNTG2Q9NY99 539 aa19.42■□□□□ 0.7
VPS52-214ENST00000463486 DNAJB4Q9UDY4 337 aa19.42■□□□□ 0.7
VPS52-214ENST00000463486 H0YCG3 227 aa19.41■□□□□ 0.7
VPS52-214ENST00000463486 TOM1L1O75674 476 aa19.41■□□□□ 0.7
VPS52-214ENST00000463486 FGF18O76093 207 aa19.41■□□□□ 0.7
VPS52-214ENST00000463486 POMCP01189 267 aa19.41■□□□□ 0.7
VPS52-214ENST00000463486 GALTP07902 379 aa19.41■□□□□ 0.7
VPS52-214ENST00000463486 PLCB3Q01970 1234 aa19.41■□□□□ 0.7
VPS52-214ENST00000463486 DSC1Q08554 894 aa19.41■□□□□ 0.7
VPS52-214ENST00000463486 DCAF4L1Q3SXM0 396 aa19.41■□□□□ 0.7
VPS52-214ENST00000463486 SLC39A4Q6P5W5 647 aa19.41■□□□□ 0.7
VPS52-214ENST00000463486 TMEM173Q86WV6 379 aaPredicted RBP19.41■□□□□ 0.7
VPS52-214ENST00000463486 SLC39A11Q8N1S5 342 aa19.41■□□□□ 0.7
VPS52-214ENST00000463486 BCL7CQ8WUZ0 217 aaPredicted RBP19.41■□□□□ 0.7
VPS52-214ENST00000463486 GOLPH3LQ9H4A5 285 aa19.41■□□□□ 0.7
VPS52-214ENST00000463486 AAASQ9NRG9 546 aa19.41■□□□□ 0.7
VPS52-214ENST00000463486 OLFML3Q9NRN5 406 aa19.41■□□□□ 0.7
VPS52-214ENST00000463486 KLK14Q9P0G3 267 aa19.41■□□□□ 0.7
VPS52-214ENST00000463486 KANSL3Q9P2N6 904 aa19.41■□□□□ 0.7
VPS52-214ENST00000463486 SEL1LQ9UBV2 794 aa19.41■□□□□ 0.7
VPS52-214ENST00000463486 SERTAD1Q9UHV2 236 aa19.41■□□□□ 0.7
VPS52-214ENST00000463486 PCDHB12Q9Y5F1 795 aa19.41■□□□□ 0.7
VPS52-214ENST00000463486 BRWD1Q9NSI6 2320 aa19.41■□□□□ 0.7
VPS52-214ENST00000463486 ATG2AQ2TAZ0 1938 aa19.41■□□□□ 0.7
VPS52-214ENST00000463486 PLXNA4Q9HCM2 1894 aa19.4■□□□□ 0.7
VPS52-214ENST00000463486 K7ENM7 598 aa19.4■□□□□ 0.7
VPS52-214ENST00000463486 PTGESO14684 152 aa19.4■□□□□ 0.7
VPS52-214ENST00000463486 GTPBP6O43824 516 aaPredicted RBP19.4■□□□□ 0.7
VPS52-214ENST00000463486 RECQL4O94761 1208 aa19.4■□□□□ 0.7
VPS52-214ENST00000463486 SLFN14P0C7P3 912 aa19.4■□□□□ 0.7
VPS52-214ENST00000463486 MCF2P10911 925 aa19.4■□□□□ 0.7
VPS52-214ENST00000463486 GAP43P17677 238 aa19.4■□□□□ 0.7
VPS52-214ENST00000463486 CASP1P29466 404 aa19.4■□□□□ 0.7
VPS52-214ENST00000463486 SLC11A1P49279 550 aa19.4■□□□□ 0.7
VPS52-214ENST00000463486 SCNN1GP51170 649 aa19.4■□□□□ 0.7
VPS52-214ENST00000463486 CASP5P51878 434 aa19.4■□□□□ 0.7
VPS52-214ENST00000463486 NDUFA8P51970 172 aa19.4■□□□□ 0.7
VPS52-214ENST00000463486 MCL1Q07820 350 aa19.4■□□□□ 0.7
VPS52-214ENST00000463486 EHHADHQ08426 723 aa19.4■□□□□ 0.7
VPS52-214ENST00000463486 STRN3Q13033 797 aa19.4■□□□□ 0.7
VPS52-214ENST00000463486 NAB2Q15742 525 aa19.4■□□□□ 0.7
VPS52-214ENST00000463486 CCDC85BQ15834 202 aaPredicted RBP19.4■□□□□ 0.7
VPS52-214ENST00000463486 SPOUT1Q5T280 376 aaKnown RBP19.4■□□□□ 0.7
VPS52-214ENST00000463486 MPZL3Q6UWV2 235 aa19.4■□□□□ 0.7
VPS52-214ENST00000463486 ALKAL1Q6UXT8 129 aa19.4■□□□□ 0.7
VPS52-214ENST00000463486 MAP4K3Q8IVH8 894 aa19.4■□□□□ 0.7
VPS52-214ENST00000463486 ZNF558Q96NG5 402 aa19.4■□□□□ 0.7
VPS52-214ENST00000463486 ADPGKQ9BRR6 497 aa19.4■□□□□ 0.7
VPS52-214ENST00000463486 LMAN2LQ9H0V9 348 aa19.4■□□□□ 0.7
VPS52-214ENST00000463486 IKZF4Q9H2S9 585 aa19.4■□□□□ 0.7
VPS52-214ENST00000463486 MAGEF1Q9HAY2 307 aa19.4■□□□□ 0.7
VPS52-214ENST00000463486 NT5C1B-RDH14C9J2C7 533 aa19.39■□□□□ 0.69
VPS52-214ENST00000463486 FAM189A1O60320 539 aa19.39■□□□□ 0.69
VPS52-214ENST00000463486 GRM5P41594 1212 aa19.39■□□□□ 0.69
VPS52-214ENST00000463486 KCNA1Q09470 495 aa19.39■□□□□ 0.69
VPS52-214ENST00000463486 CSPP1Q1MSJ5 1256 aa19.39■□□□□ 0.69
VPS52-214ENST00000463486 TMEM132AQ24JP5 1023 aa19.39■□□□□ 0.69
VPS52-214ENST00000463486 XKR4Q5GH76 650 aa19.39■□□□□ 0.69
VPS52-214ENST00000463486 ZBTB33Q86T24 672 aa19.39■□□□□ 0.69
VPS52-214ENST00000463486 COLGALT2Q8IYK4 626 aa19.39■□□□□ 0.69
VPS52-214ENST00000463486 GRAMD1CQ8IYS0 662 aa19.39■□□□□ 0.69
VPS52-214ENST00000463486 SLC17A8Q8NDX2 589 aa19.39■□□□□ 0.69
VPS52-214ENST00000463486 URGCPQ8TCY9 931 aa19.39■□□□□ 0.69
VPS52-214ENST00000463486 POF1BQ8WVV4 589 aa19.39■□□□□ 0.69
VPS52-214ENST00000463486 PANK4Q9NVE7 773 aa19.39■□□□□ 0.69
VPS52-214ENST00000463486 SPG21Q9NZD8 308 aa19.39■□□□□ 0.69
VPS52-214ENST00000463486 PARP2Q9UGN5 583 aa19.39■□□□□ 0.69
VPS52-214ENST00000463486 ANKRD63C9JTQ0 380 aa19.38■□□□□ 0.69
VPS52-214ENST00000463486 ZC3H11AO75152 810 aaKnown RBP eCLIP19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms