RNA–Protein interactions for RNA: ENST00000463147.1

USH2A-203, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 618 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-203ENST00000463147 KIR2DL3P43628 341 aa5.46□□□□□ -1.54
USH2A-203ENST00000463147 IRF9Q00978 393 aa5.46□□□□□ -1.54
USH2A-203ENST00000463147 SLC6A3Q01959 620 aa5.46□□□□□ -1.54
USH2A-203ENST00000463147 DSG1Q02413 1049 aa5.46□□□□□ -1.54
USH2A-203ENST00000463147 OVCH1Q7RTY7 1134 aa5.46□□□□□ -1.54
USH2A-203ENST00000463147 HDGFL2Q7Z4V5 671 aaPredicted RBP5.46□□□□□ -1.54
USH2A-203ENST00000463147 GLCCI1Q86VQ1 547 aa5.46□□□□□ -1.54
USH2A-203ENST00000463147 NME9Q86XW9 330 aa5.46□□□□□ -1.54
USH2A-203ENST00000463147 CHPFQ8IZ52 775 aa5.46□□□□□ -1.54
USH2A-203ENST00000463147 BEND2Q8NDZ0 799 aa5.46□□□□□ -1.54
USH2A-203ENST00000463147 TTC1Q99614 292 aa5.46□□□□□ -1.54
USH2A-203ENST00000463147 BOCQ9BWV1 1114 aa5.46□□□□□ -1.54
USH2A-203ENST00000463147 PUS7LQ9H0K6 701 aaKnown RBP5.46□□□□□ -1.54
USH2A-203ENST00000463147 CDH19Q9H159 772 aa5.46□□□□□ -1.54
USH2A-203ENST00000463147 IFT22Q9H7X7 185 aa5.46□□□□□ -1.54
USH2A-203ENST00000463147 NCDNQ9UBB6 729 aa5.46□□□□□ -1.54
USH2A-203ENST00000463147 INSL6Q9Y581 213 aa5.46□□□□□ -1.54
USH2A-203ENST00000463147 F2P00734 622 aa5.45□□□□□ -1.54
USH2A-203ENST00000463147 ELLP55199 621 aaPredicted RBP5.45□□□□□ -1.54
USH2A-203ENST00000463147 ANTXR2P58335 489 aa5.45□□□□□ -1.54
USH2A-203ENST00000463147 BLOC1S1P78537 153 aa5.45□□□□□ -1.54
USH2A-203ENST00000463147 INAVAQ3KP66 663 aa5.45□□□□□ -1.54
USH2A-203ENST00000463147 EPHA10Q5JZY3 1008 aa5.45□□□□□ -1.54
USH2A-203ENST00000463147 TTC38Q5R3I4 469 aa5.45□□□□□ -1.54
USH2A-203ENST00000463147 SYDE2Q5VT97 1194 aa5.45□□□□□ -1.54
USH2A-203ENST00000463147 SLFN12LQ6IEE8 588 aa5.45□□□□□ -1.54
USH2A-203ENST00000463147 Q6YL49 198 aa5.45□□□□□ -1.54
USH2A-203ENST00000463147 UBE2R2Q712K3 238 aaPredicted RBP5.45□□□□□ -1.54
USH2A-203ENST00000463147 MYO1HQ8N1T3 1032 aa5.45□□□□□ -1.54
USH2A-203ENST00000463147 LCORLQ8N3X6 602 aa5.45□□□□□ -1.54
USH2A-203ENST00000463147 IGSF22Q8N9C0 903 aa5.45□□□□□ -1.54
USH2A-203ENST00000463147 GLB1L3Q8NCI6 653 aaPredicted RBP5.45□□□□□ -1.54
USH2A-203ENST00000463147 SMC1BQ8NDV3 1235 aa5.45□□□□□ -1.54
USH2A-203ENST00000463147 USP7Q93009 1102 aa5.45□□□□□ -1.54
USH2A-203ENST00000463147 COQ10AQ96MF6 247 aa5.45□□□□□ -1.54
USH2A-203ENST00000463147 DCLRE1CQ96SD1 692 aaKnown RBP5.45□□□□□ -1.54
USH2A-203ENST00000463147 ACSS2Q9NR19 701 aa5.45□□□□□ -1.54
USH2A-203ENST00000463147 EIF2B4Q9UI10 523 aaKnown RBP5.45□□□□□ -1.54
USH2A-203ENST00000463147 NOB1Q9ULX3 412 aaKnown RBP5.45□□□□□ -1.54
USH2A-203ENST00000463147 COQ6Q9Y2Z9 468 aa5.45□□□□□ -1.54
USH2A-203ENST00000463147 UBA6A0AVT1 1052 aaPredicted RBP5.44□□□□□ -1.54
USH2A-203ENST00000463147 GAGE12BA1L429 117 aa5.44□□□□□ -1.54
USH2A-203ENST00000463147 GAGE12HA6NDE8 117 aa5.44□□□□□ -1.54
USH2A-203ENST00000463147 FZD9O00144 591 aa5.44□□□□□ -1.54
USH2A-203ENST00000463147 KIF3BO15066 747 aa5.44□□□□□ -1.54
USH2A-203ENST00000463147 ZEB2O60315 1214 aa5.44□□□□□ -1.54
USH2A-203ENST00000463147 ABLIM3O94929 683 aa5.44□□□□□ -1.54
USH2A-203ENST00000463147 RGS3P49796 1198 aa5.44□□□□□ -1.54
USH2A-203ENST00000463147 MECP2P51608 486 aaKnown RBP5.44□□□□□ -1.54
USH2A-203ENST00000463147 ERVK-21P61565 698 aa5.44□□□□□ -1.54
USH2A-203ENST00000463147 PIN1Q13526 163 aaPredicted RBP5.44□□□□□ -1.54
USH2A-203ENST00000463147 CREB3L3Q68CJ9 461 aa5.44□□□□□ -1.54
USH2A-203ENST00000463147 OTOP1Q7RTM1 612 aa5.44□□□□□ -1.54
USH2A-203ENST00000463147 EXOC8Q8IYI6 725 aa5.44□□□□□ -1.54
USH2A-203ENST00000463147 OR2W6PQ8NHA6 318 aa5.44□□□□□ -1.54
USH2A-203ENST00000463147 RHOBTB2Q9BYZ6 727 aa5.44□□□□□ -1.54
USH2A-203ENST00000463147 OSBPL6Q9BZF3 934 aa5.44□□□□□ -1.54
USH2A-203ENST00000463147 HAPLN2Q9GZV7 340 aa5.44□□□□□ -1.54
USH2A-203ENST00000463147 KCNH6Q9H252 994 aa5.44□□□□□ -1.54
USH2A-203ENST00000463147 AASDHPPTQ9NRN7 309 aa5.44□□□□□ -1.54
USH2A-203ENST00000463147 SPTLC3Q9NUV7 552 aa5.44□□□□□ -1.54
USH2A-203ENST00000463147 MAGEL2Q9UJ55 1249 aa5.44□□□□□ -1.54
USH2A-203ENST00000463147 CLCA2Q9UQC9 943 aa5.44□□□□□ -1.54
USH2A-203ENST00000463147 FSBPO95073 299 aa5.43□□□□□ -1.54
USH2A-203ENST00000463147 FKBP9O95302 570 aa5.43□□□□□ -1.54
USH2A-203ENST00000463147 FLT3P36888 993 aa5.43□□□□□ -1.54
USH2A-203ENST00000463147 ZEB1P37275 1124 aaPredicted RBP5.43□□□□□ -1.54
USH2A-203ENST00000463147 SCNN1BP51168 640 aa5.43□□□□□ -1.54
USH2A-203ENST00000463147 ABCB5Q2M3G0 1257 aa5.43□□□□□ -1.54
USH2A-203ENST00000463147 FKBP9P1Q75LS8 142 aa5.43□□□□□ -1.54
USH2A-203ENST00000463147 FAM83AQ86UY5 434 aa5.43□□□□□ -1.54
USH2A-203ENST00000463147 KIF18BQ86Y91 864 aa5.43□□□□□ -1.54
USH2A-203ENST00000463147 ARHGEF19Q8IW93 802 aa5.43□□□□□ -1.54
USH2A-203ENST00000463147 CHTF18Q8WVB6 975 aa5.43□□□□□ -1.54
USH2A-203ENST00000463147 SLC9A6Q92581 669 aa5.43□□□□□ -1.54
USH2A-203ENST00000463147 CHMP4CQ96CF2 233 aa5.43□□□□□ -1.54
USH2A-203ENST00000463147 GPR101Q96P66 508 aaPredicted RBP5.43□□□□□ -1.54
USH2A-203ENST00000463147 SERHL2Q9H4I8 314 aa5.43□□□□□ -1.54
USH2A-203ENST00000463147 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.43□□□□□ -1.54
USH2A-203ENST00000463147 ARNT2Q9HBZ2 717 aa5.43□□□□□ -1.54
USH2A-203ENST00000463147 H2AFY2Q9P0M6 372 aaPredicted RBP5.43□□□□□ -1.54
USH2A-203ENST00000463147 TMEM200CA6NKL6 621 aa5.42□□□□□ -1.54
USH2A-203ENST00000463147 B4E1Z4 1266 aa5.42□□□□□ -1.54
USH2A-203ENST00000463147 RNASET2O00584 256 aaKnown RBP5.42□□□□□ -1.54
USH2A-203ENST00000463147 CYP17A1P05093 508 aa5.42□□□□□ -1.54
USH2A-203ENST00000463147 ATP2A2P16615 1042 aaKnown RBP5.42□□□□□ -1.54
USH2A-203ENST00000463147 ATF3P18847 181 aa5.42□□□□□ -1.54
USH2A-203ENST00000463147 HK1P19367 917 aa5.42□□□□□ -1.54
USH2A-203ENST00000463147 IARSP41252 1262 aaKnown RBP5.42□□□□□ -1.54
USH2A-203ENST00000463147 UBE4AQ14139 1066 aa5.42□□□□□ -1.54
USH2A-203ENST00000463147 MLC1Q15049 377 aa5.42□□□□□ -1.54
USH2A-203ENST00000463147 FAM102BQ5T8I3 360 aa5.42□□□□□ -1.54
USH2A-203ENST00000463147 ZBTB46Q86UZ6 589 aa5.42□□□□□ -1.54
USH2A-203ENST00000463147 PASD1Q8IV76 773 aa5.42□□□□□ -1.54
USH2A-203ENST00000463147 TCEAL8Q8IYN2 117 aa5.42□□□□□ -1.54
USH2A-203ENST00000463147 UIMC1Q96RL1 719 aa5.42□□□□□ -1.54
USH2A-203ENST00000463147 PSMD1Q99460 953 aa5.42□□□□□ -1.54
USH2A-203ENST00000463147 CPPED1Q9BRF8 314 aaPredicted RBP5.42□□□□□ -1.54
USH2A-203ENST00000463147 EMC7Q9NPA0 242 aa5.42□□□□□ -1.54
USH2A-203ENST00000463147 SPATA31A6Q5VVP1 1343 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms