RNA–Protein interactions for RNA: ENST00000462537.3

CDKN1A-206, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

TSL 3

Gene CDKN1A, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-206ENST00000462537 STRN3Q13033 797 aa20.37■□□□□ 0.85
CDKN1A-206ENST00000462537 DCAF4L1Q3SXM0 396 aa20.37■□□□□ 0.85
CDKN1A-206ENST00000462537 NT5DC1Q5TFE4 455 aa20.37■□□□□ 0.85
CDKN1A-206ENST00000462537 RBM23Q86U06 439 aaKnown RBP20.37■□□□□ 0.85
CDKN1A-206ENST00000462537 SPIRE2Q8WWL2 714 aa20.37■□□□□ 0.85
CDKN1A-206ENST00000462537 PABPC5Q96DU9 382 aaKnown RBP20.37■□□□□ 0.85
CDKN1A-206ENST00000462537 TCF25Q9BQ70 676 aa20.37■□□□□ 0.85
CDKN1A-206ENST00000462537 MRPL4Q9BYD3 311 aaKnown RBP20.37■□□□□ 0.85
CDKN1A-206ENST00000462537 ZHX3Q9H4I2 956 aa20.37■□□□□ 0.85
CDKN1A-206ENST00000462537 STK17AQ9UEE5 414 aa20.37■□□□□ 0.85
CDKN1A-206ENST00000462537 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.36■□□□□ 0.85
CDKN1A-206ENST00000462537 DLL1O00548 723 aa20.36■□□□□ 0.85
CDKN1A-206ENST00000462537 B4GALT3O60512 393 aa20.36■□□□□ 0.85
CDKN1A-206ENST00000462537 TBCAO75347 108 aaKnown RBP20.36■□□□□ 0.85
CDKN1A-206ENST00000462537 YEATS4O95619 227 aa20.36■□□□□ 0.85
CDKN1A-206ENST00000462537 GALTP07902 379 aa20.36■□□□□ 0.85
CDKN1A-206ENST00000462537 NRIP1P48552 1158 aa20.36■□□□□ 0.85
CDKN1A-206ENST00000462537 PDE12Q6L8Q7 609 aaKnown RBP20.36■□□□□ 0.85
CDKN1A-206ENST00000462537 TMC7Q7Z402 723 aa20.36■□□□□ 0.85
CDKN1A-206ENST00000462537 TMEM173Q86WV6 379 aaPredicted RBP20.36■□□□□ 0.85
CDKN1A-206ENST00000462537 MYCT1Q8N699 235 aa20.36■□□□□ 0.85
CDKN1A-206ENST00000462537 IGSF21Q96ID5 467 aa20.36■□□□□ 0.85
CDKN1A-206ENST00000462537 COL25A1Q9BXS0 654 aaPredicted RBP20.36■□□□□ 0.85
CDKN1A-206ENST00000462537 TLE6Q9H808 572 aa20.36■□□□□ 0.85
CDKN1A-206ENST00000462537 SNTG2Q9NY99 539 aa20.36■□□□□ 0.85
CDKN1A-206ENST00000462537 FAN1Q9Y2M0 1017 aa20.36■□□□□ 0.85
CDKN1A-206ENST00000462537 FSCN2O14926 492 aa20.35■□□□□ 0.85
CDKN1A-206ENST00000462537 PPP6R2O75170 966 aa20.35■□□□□ 0.85
CDKN1A-206ENST00000462537 ALDH2P05091 517 aa20.35■□□□□ 0.85
CDKN1A-206ENST00000462537 BECN1Q14457 450 aa20.35■□□□□ 0.85
CDKN1A-206ENST00000462537 BMS1Q14692 1282 aaKnown RBP20.35■□□□□ 0.85
CDKN1A-206ENST00000462537 ZNF568Q3ZCX4 644 aa20.35■□□□□ 0.85
CDKN1A-206ENST00000462537 TAS1R3Q7RTX0 852 aa20.35■□□□□ 0.85
CDKN1A-206ENST00000462537 ACO2Q99798 780 aaKnown RBP20.35■□□□□ 0.85
CDKN1A-206ENST00000462537 TMEM175Q9BSA9 504 aa20.35■□□□□ 0.85
CDKN1A-206ENST00000462537 NTPCRQ9BSD7 190 aaKnown RBP20.35■□□□□ 0.85
CDKN1A-206ENST00000462537 TARS2Q9BW92 718 aaKnown RBP20.35■□□□□ 0.85
CDKN1A-206ENST00000462537 PANK2Q9BZ23 570 aa20.35■□□□□ 0.85
CDKN1A-206ENST00000462537 PARVGQ9HBI0 331 aa20.35■□□□□ 0.85
CDKN1A-206ENST00000462537 NGRNQ9NPE2 291 aaKnown RBP20.35■□□□□ 0.85
CDKN1A-206ENST00000462537 MIOSQ9NXC5 875 aa20.35■□□□□ 0.85
CDKN1A-206ENST00000462537 TNFSF13BQ9Y275 285 aa20.35■□□□□ 0.85
CDKN1A-206ENST00000462537 GDAQ9Y2T3 454 aa20.35■□□□□ 0.85
CDKN1A-206ENST00000462537 MYO7AQ13402 2215 aa20.35■□□□□ 0.85
CDKN1A-206ENST00000462537 XIRP2A4UGR9 3374 aa20.35■□□□□ 0.85
CDKN1A-206ENST00000462537 H0YCG3 227 aa20.34■□□□□ 0.85
CDKN1A-206ENST00000462537 H3BQ06 376 aaPredicted RBP20.34■□□□□ 0.85
CDKN1A-206ENST00000462537 INPPL1O15357 1258 aa20.34■□□□□ 0.85
CDKN1A-206ENST00000462537 RECQL4O94761 1208 aa20.34■□□□□ 0.85
CDKN1A-206ENST00000462537 MAPTP10636 758 aaKnown RBP20.34■□□□□ 0.85
CDKN1A-206ENST00000462537 STAT6P42226 847 aa20.34■□□□□ 0.85
CDKN1A-206ENST00000462537 OR1G1P47890 313 aa20.34■□□□□ 0.85
CDKN1A-206ENST00000462537 GIT2Q14161 759 aa20.34■□□□□ 0.85
CDKN1A-206ENST00000462537 CCDC73Q6ZRK6 1079 aa20.34■□□□□ 0.85
CDKN1A-206ENST00000462537 SV2BQ7L1I2 683 aa20.34■□□□□ 0.85
CDKN1A-206ENST00000462537 ZBTB33Q86T24 672 aa20.34■□□□□ 0.85
CDKN1A-206ENST00000462537 VPS52Q8N1B4 723 aa20.34■□□□□ 0.85
CDKN1A-206ENST00000462537 TMEM161BQ8NDZ6 487 aa20.34■□□□□ 0.85
CDKN1A-206ENST00000462537 BCL7CQ8WUZ0 217 aaPredicted RBP20.34■□□□□ 0.85
CDKN1A-206ENST00000462537 TCHPQ9BT92 498 aa20.34■□□□□ 0.85
CDKN1A-206ENST00000462537 PRG3Q9Y2Y8 225 aaPredicted RBP20.34■□□□□ 0.85
CDKN1A-206ENST00000462537 ZMYM2Q9UBW7 1377 aa20.34■□□□□ 0.85
CDKN1A-206ENST00000462537 K7ENM7 598 aa20.33■□□□□ 0.85
CDKN1A-206ENST00000462537 NRP1O14786 923 aa20.33■□□□□ 0.85
CDKN1A-206ENST00000462537 PER2O15055 1255 aa20.33■□□□□ 0.85
CDKN1A-206ENST00000462537 LINC01565O15544 149 aa20.33■□□□□ 0.85
CDKN1A-206ENST00000462537 NR1I2O75469 434 aa20.33■□□□□ 0.85
CDKN1A-206ENST00000462537 NDUFV1P49821 464 aa20.33■□□□□ 0.85
CDKN1A-206ENST00000462537 NCKAP1LP55160 1127 aa20.33■□□□□ 0.85
CDKN1A-206ENST00000462537 GRIK3Q13003 919 aa20.33■□□□□ 0.85
CDKN1A-206ENST00000462537 SMC1AQ14683 1233 aaKnown RBP20.33■□□□□ 0.85
CDKN1A-206ENST00000462537 DYMQ7RTS9 669 aa20.33■□□□□ 0.85
CDKN1A-206ENST00000462537 HAUS6Q7Z4H7 955 aa20.33■□□□□ 0.85
CDKN1A-206ENST00000462537 DDX53Q86TM3 631 aaKnown RBP20.33■□□□□ 0.85
CDKN1A-206ENST00000462537 COLGALT2Q8IYK4 626 aa20.33■□□□□ 0.85
CDKN1A-206ENST00000462537 PDILTQ8N807 584 aa20.33■□□□□ 0.85
CDKN1A-206ENST00000462537 ADAMTS19Q8TE59 1207 aa20.33■□□□□ 0.85
CDKN1A-206ENST00000462537 BICD1Q96G01 975 aa20.33■□□□□ 0.85
CDKN1A-206ENST00000462537 TCF20Q9UGU0 1960 aaKnown RBP20.32■□□□□ 0.84
CDKN1A-206ENST00000462537 HIDE1A8MVS5 230 aa20.32■□□□□ 0.84
CDKN1A-206ENST00000462537 CUTAO60888 179 aa20.32■□□□□ 0.84
CDKN1A-206ENST00000462537 HARSP12081 509 aaKnown RBP20.32■□□□□ 0.84
CDKN1A-206ENST00000462537 MATR3P43243 847 aaKnown RBP eCLIP20.32■□□□□ 0.84
CDKN1A-206ENST00000462537 COL19A1Q14993 1142 aa20.32■□□□□ 0.84
CDKN1A-206ENST00000462537 LEXMQ3ZCV2 418 aa20.32■□□□□ 0.84
CDKN1A-206ENST00000462537 ATL3Q6DD88 541 aa20.32■□□□□ 0.84
CDKN1A-206ENST00000462537 EFHBQ8N7U6 833 aa20.32■□□□□ 0.84
CDKN1A-206ENST00000462537 KCNG4Q8TDN1 519 aa20.32■□□□□ 0.84
CDKN1A-206ENST00000462537 CDT1Q9H211 546 aa20.32■□□□□ 0.84
CDKN1A-206ENST00000462537 ANKFY1Q9P2R3 1169 aa20.32■□□□□ 0.84
CDKN1A-206ENST00000462537 CFAP45Q9UL16 551 aa20.32■□□□□ 0.84
CDKN1A-206ENST00000462537 SPTBN5Q9NRC6 3674 aaKnown RBP20.32■□□□□ 0.84
CDKN1A-206ENST00000462537 TRAK2O60296 914 aa20.31■□□□□ 0.84
CDKN1A-206ENST00000462537 BMP1P13497 986 aa20.31■□□□□ 0.84
CDKN1A-206ENST00000462537 ME1P48163 572 aa20.31■□□□□ 0.84
CDKN1A-206ENST00000462537 ZNF131P52739 623 aa20.31■□□□□ 0.84
CDKN1A-206ENST00000462537 YARSP54577 528 aaKnown RBP20.31■□□□□ 0.84
CDKN1A-206ENST00000462537 OSTNP61366 133 aa20.31■□□□□ 0.84
CDKN1A-206ENST00000462537 DNM1Q05193 864 aaKnown RBP20.31■□□□□ 0.84
CDKN1A-206ENST00000462537 DSC1Q08554 894 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms