RNA–Protein interactions for RNA: ENST00000462475.1

COL7A1-204, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 305 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-204ENST00000462475 MAEAQ7L5Y9 396 aa17.87■□□□□ 0.45
COL7A1-204ENST00000462475 OTOP3Q7RTS5 596 aa17.87■□□□□ 0.45
COL7A1-204ENST00000462475 GSTCDQ8NEC7 633 aa17.87■□□□□ 0.45
COL7A1-204ENST00000462475 CMASQ8NFW8 434 aaPredicted RBP17.87■□□□□ 0.45
COL7A1-204ENST00000462475 ATOH1Q92858 354 aaPredicted RBP17.87■□□□□ 0.45
COL7A1-204ENST00000462475 B3GALT6Q96L58 329 aa17.87■□□□□ 0.45
COL7A1-204ENST00000462475 N4BP1O75113 896 aaKnown RBP17.86■□□□□ 0.45
COL7A1-204ENST00000462475 GLUD1P00367 558 aa17.86■□□□□ 0.45
COL7A1-204ENST00000462475 SPATA31C1P0DKV0 1188 aa17.86■□□□□ 0.45
COL7A1-204ENST00000462475 DSG1Q02413 1049 aa17.86■□□□□ 0.45
COL7A1-204ENST00000462475 TRIM29Q14134 588 aa17.86■□□□□ 0.45
COL7A1-204ENST00000462475 SLC27A1Q6PCB7 646 aa17.86■□□□□ 0.45
COL7A1-204ENST00000462475 HACE1Q8IYU2 909 aa17.86■□□□□ 0.45
COL7A1-204ENST00000462475 RABGGTAQ92696 567 aa17.86■□□□□ 0.45
COL7A1-204ENST00000462475 GPR62Q9BZJ7 368 aa17.86■□□□□ 0.45
COL7A1-204ENST00000462475 RXFP1Q9HBX9 757 aa17.86■□□□□ 0.45
COL7A1-204ENST00000462475 KLK14Q9P0G3 267 aa17.86■□□□□ 0.45
COL7A1-204ENST00000462475 SSX2IPQ9Y2D8 614 aa17.86■□□□□ 0.45
COL7A1-204ENST00000462475 MYO10Q9HD67 2058 aa17.86■□□□□ 0.45
COL7A1-204ENST00000462475 ZFHX2Q9C0A1 2572 aaPredicted RBP17.86■□□□□ 0.45
COL7A1-204ENST00000462475 A0A1B0GUA9 196 aa17.85■□□□□ 0.45
COL7A1-204ENST00000462475 LRRIQ4A6NIV6 560 aa17.85■□□□□ 0.45
COL7A1-204ENST00000462475 NR1I2O75469 434 aa17.85■□□□□ 0.45
COL7A1-204ENST00000462475 RFPL2O75678 378 aa17.85■□□□□ 0.45
COL7A1-204ENST00000462475 NEFLP07196 543 aa17.85■□□□□ 0.45
COL7A1-204ENST00000462475 ATP2B1P20020 1258 aa17.85■□□□□ 0.45
COL7A1-204ENST00000462475 NEK4P51957 841 aa17.85■□□□□ 0.45
COL7A1-204ENST00000462475 NUBP1P53384 320 aa17.85■□□□□ 0.45
COL7A1-204ENST00000462475 GUCY1B3Q02153 619 aa17.85■□□□□ 0.45
COL7A1-204ENST00000462475 C2orf16Q68DN1 1984 aa17.85■□□□□ 0.45
COL7A1-204ENST00000462475 CWF19L1Q69YN2 538 aaKnown RBP17.85■□□□□ 0.45
COL7A1-204ENST00000462475 ASTLQ6HA08 431 aaPredicted RBP17.85■□□□□ 0.45
COL7A1-204ENST00000462475 FUT10Q6P4F1 479 aa17.85■□□□□ 0.45
COL7A1-204ENST00000462475 COLEC11Q9BWP8 271 aa17.85■□□□□ 0.45
COL7A1-204ENST00000462475 MFSD1Q9H3U5 465 aa17.85■□□□□ 0.45
COL7A1-204ENST00000462475 CHST7Q9NS84 486 aa17.85■□□□□ 0.45
COL7A1-204ENST00000462475 CACNG4Q9UBN1 327 aa17.85■□□□□ 0.45
COL7A1-204ENST00000462475 CFAP54Q96N23 3096 aa17.85■□□□□ 0.45
COL7A1-204ENST00000462475 PLXNA3P51805 1871 aa17.84■□□□□ 0.45
COL7A1-204ENST00000462475 CCDC195A0A1B0GUA6 201 aa17.84■□□□□ 0.45
COL7A1-204ENST00000462475 GFRA3O60609 400 aa17.84■□□□□ 0.45
COL7A1-204ENST00000462475 MED24O75448 989 aa17.84■□□□□ 0.45
COL7A1-204ENST00000462475 SPATA31D3P0C874 917 aa17.84■□□□□ 0.45
COL7A1-204ENST00000462475 MCM7P33993 719 aa17.84■□□□□ 0.45
COL7A1-204ENST00000462475 GRIK3Q13003 919 aa17.84■□□□□ 0.45
COL7A1-204ENST00000462475 TDGQ13569 410 aa17.84■□□□□ 0.45
COL7A1-204ENST00000462475 CDCA2Q69YH5 1023 aaPredicted RBP17.84■□□□□ 0.45
COL7A1-204ENST00000462475 PPP4R3CPQ6ZMV5 832 aa17.84■□□□□ 0.45
COL7A1-204ENST00000462475 SPATA31D4Q6ZUB0 917 aa17.84■□□□□ 0.45
COL7A1-204ENST00000462475 CATSPER3Q86XQ3 398 aa17.84■□□□□ 0.45
COL7A1-204ENST00000462475 ZNF707Q96C28 371 aaPredicted RBP17.84■□□□□ 0.45
COL7A1-204ENST00000462475 IRF2BPLQ9H1B7 796 aa17.84■□□□□ 0.45
COL7A1-204ENST00000462475 KCNK12Q9HB15 430 aa17.84■□□□□ 0.45
COL7A1-204ENST00000462475 PARP2Q9UGN5 583 aa17.84■□□□□ 0.45
COL7A1-204ENST00000462475 ZMYM2Q9UBW7 1377 aa17.83■□□□□ 0.45
COL7A1-204ENST00000462475 CLUHO75153 1309 aa17.83■□□□□ 0.44
COL7A1-204ENST00000462475 TTLL13PA6NNM8 815 aa17.83■□□□□ 0.44
COL7A1-204ENST00000462475 XRCC6P12956 609 aaKnown RBP eCLIP17.83■□□□□ 0.44
COL7A1-204ENST00000462475 POTEGQ6S5H5 508 aa17.83■□□□□ 0.44
COL7A1-204ENST00000462475 PALB2Q86YC2 1186 aa17.83■□□□□ 0.44
COL7A1-204ENST00000462475 GLYCTKQ8IVS8 523 aa17.83■□□□□ 0.44
COL7A1-204ENST00000462475 FLCNQ8NFG4 579 aa17.83■□□□□ 0.44
COL7A1-204ENST00000462475 BSNDQ8WZ55 320 aa17.83■□□□□ 0.44
COL7A1-204ENST00000462475 PAAF1Q9BRP4 392 aa17.83■□□□□ 0.44
COL7A1-204ENST00000462475 WDR6Q9NNW5 1121 aaKnown RBP17.83■□□□□ 0.44
COL7A1-204ENST00000462475 TUFT1Q9NNX1 390 aa17.83■□□□□ 0.44
COL7A1-204ENST00000462475 PRMT7Q9NVM4 692 aaPredicted RBP17.83■□□□□ 0.44
COL7A1-204ENST00000462475 ADAM28Q9UKQ2 775 aa17.83■□□□□ 0.44
COL7A1-204ENST00000462475 DUSP12Q9UNI6 340 aa17.83■□□□□ 0.44
COL7A1-204ENST00000462475 VPS13AQ96RL7 3174 aa17.83■□□□□ 0.44
COL7A1-204ENST00000462475 TGM5O43548 720 aa17.82■□□□□ 0.44
COL7A1-204ENST00000462475 NARSO43776 548 aaKnown RBP17.82■□□□□ 0.44
COL7A1-204ENST00000462475 ST18O60284 1047 aa17.82■□□□□ 0.44
COL7A1-204ENST00000462475 RPL17P18621 184 aaKnown RBP17.82■□□□□ 0.44
COL7A1-204ENST00000462475 GBP2P32456 591 aaPredicted RBP17.82■□□□□ 0.44
COL7A1-204ENST00000462475 USP41Q3LFD5 358 aa17.82■□□□□ 0.44
COL7A1-204ENST00000462475 ELMSAN1Q6PJG2 1045 aa17.82■□□□□ 0.44
COL7A1-204ENST00000462475 MCPH1Q8NEM0 835 aa17.82■□□□□ 0.44
COL7A1-204ENST00000462475 RSAD2Q8WXG1 361 aa17.82■□□□□ 0.44
COL7A1-204ENST00000462475 RIN2Q8WYP3 895 aaPredicted RBP17.82■□□□□ 0.44
COL7A1-204ENST00000462475 SMG7Q92540 1137 aaKnown RBP17.82■□□□□ 0.44
COL7A1-204ENST00000462475 PRIMPOLQ96LW4 560 aa17.82■□□□□ 0.44
COL7A1-204ENST00000462475 MYADMQ96S97 322 aa17.82■□□□□ 0.44
COL7A1-204ENST00000462475 RHOBTB2Q9BYZ6 727 aa17.82■□□□□ 0.44
COL7A1-204ENST00000462475 FZD8Q9H461 694 aa17.82■□□□□ 0.44
COL7A1-204ENST00000462475 PDZD7Q9H5P4 517 aa17.82■□□□□ 0.44
COL7A1-204ENST00000462475 DPP7Q9UHL4 492 aa17.82■□□□□ 0.44
COL7A1-204ENST00000462475 EDN1P05305 212 aa17.81■□□□□ 0.44
COL7A1-204ENST00000462475 NPR3P17342 541 aa17.81■□□□□ 0.44
COL7A1-204ENST00000462475 CLCN5P51795 746 aa17.81■□□□□ 0.44
COL7A1-204ENST00000462475 HSP90AA2PQ14568 343 aaPredicted RBP17.81■□□□□ 0.44
COL7A1-204ENST00000462475 FAM187BQ17R55 369 aa17.81■□□□□ 0.44
COL7A1-204ENST00000462475 RTP2Q5QGT7 225 aa17.81■□□□□ 0.44
COL7A1-204ENST00000462475 CYP26C1Q6V0L0 522 aa17.81■□□□□ 0.44
COL7A1-204ENST00000462475 ZBTB8OSQ8IWT0 167 aa17.81■□□□□ 0.44
COL7A1-204ENST00000462475 HASPINQ8TF76 798 aa17.81■□□□□ 0.44
COL7A1-204ENST00000462475 STAMQ92783 540 aa17.81■□□□□ 0.44
COL7A1-204ENST00000462475 POLR3CQ9BUI4 534 aaPredicted RBP17.81■□□□□ 0.44
COL7A1-204ENST00000462475 CXCL16Q9H2A7 254 aa17.81■□□□□ 0.44
COL7A1-204ENST00000462475 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms